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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000168:234669..241753+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01662.0 ID=Blg01662.0|Name=Blg01662.0|organism=Branchiostoma lanceolatum|type=mRNA|length=7085bp|location=Sequence derived from alignment at Sc0000168:234669..241753+ (Branchiostoma lanceolatum)
ATGATTTCGTCATGGCGATGAATTTCATTACGTCATGTTCGTTATGCATC
ATTGTGTTTATTCTTATTTTTAAGATTATTTCAAGCCCGAACGACTTTTT
TATACCACTGACGTGGGTACGAGTAGTCCCACCTCACCCGCGGATGTCAA
TTGTGTCGGATCTGATAATTGATTACAGATTCGCTGGTTGCGCTCCAAGC
GGCAGGATGGTTACGTTACCGTGGGCAAAGTCCACCTGAGCTGAGATCTG
TGCCTGAAATTACTGCTTACCTCTATCTAGAATGTATGCTCCTCATAAAA
AGATTCTTATGTAAGAAAAAAAGAACCCTTTTCCATCCGAAATTGTAACC
AAACAACTTTATGATTCTATTTATGGTCACCCCCTTGCCCAACAGGTGGT
TGAGCCCAGATTTTTGGGGCGGTATTTAACTTCACGAGACTGAGGTGAAC
AGATGTTTTCAATACGTAAGTTCAACCCGCCGTTGCATCACGCGTATTTG
CTCTTCATAAAAACTCCGGATACTTATAATCGAGTTGGTCCACATAACGA
CGCTTTATAGCGGTTGTAGTACACTCTACAACAGCGCCATGGGGAAGAAA
GCTGCAAGTTTTGATGTACAGTCCGCGTCGTCTGCCGACGCCTCAGCCGA
AGGGAAGGACCCAGCGGCGGACAACCCCGCGGGCTCGGTTCGACTGAAGA
GAAAGATCACGCTCTTCAATGGGGTAGCGATCATCGTGGGGACCATCATC
GGATCTGGAATCTTCATCTCGCCGAAGGGAGTCCTCCAACAGACCGGGTC
GGTGGGCCTGTCTCTGGTGGTGTGGGCGCTGTGTGGGGTTCTCTCCACTC
TTGGTGCCTTGTGTTACGCCGAGTTGGGAACCACCATTCCCAAGTCTGGA
GGCGACTATGTGTACATACTGGAGATATTTGGACCGTTAGCGGCTTTCCT
GAGACTGTGGGTGGAGCTGATAGTGGTCCGGCCGACGTCGCACGCCGTCA
CGGCCATCACCTTCTCTACGTACGTTATGTACCCGTTCTTCGCGCCGTGC
CCTCCGCCCGACATCACCATACGGCTACTAGCGGCAGCCGCCCTCGGTAA
GCAACTACAGCAGACAGTAGTGTTTACATTAAGGGATAAGTGTAAAAAGG
TGCGAAACAATAATAGACTGTTTACGACAACTGTTGTATGCTAATGCCCT
CCTCCTTTTACAAATTAAATACACGATACCATGATCAGATTGTAACCTTT
ATTGGAACGACTTATCATGATTCCATTATGAATTTTACACCCTAACTAGT
CTTTCTCAAAAGCAAGTAAACAAGAACCATATGTTGTGCCTTTTGACAAG
TTGATGCCGTCACTGCCAATCATGTCCTTGATCTAAATAAAGGATGTGAT
ATCAAGTGACGTCAGTGTCGTTCAGACGACACACCTCCGATCCATTCTTA
AATATTGACCAGCTGCCCTGTATATCTCGTATTAAGAACACAACACAACA
AACTCTGGGCGTCTGTCGCATGGCTCGCCTGTTTATCTATTTATCGGACC
CAATGAACTTTTCAAAACCCACAGCCAAACTCAAAGTTCACATTTGTCGT
CACATAAATGTTGTTCCTGTACCTGAACACGATTCAACGTGACGAACATT
ATATTCTACATACGCTACCTGCGGTTTGCGCAAAGGGCGTGGTGTATATC
AAAAGAGAGGGCTGTCATTGAGGTTGTGTTTCCGATGCTAAGAGCACTTA
ACGATATTCATATAATGTGTTAAGAACACACTGACACCCACCAGTGCAAA
CACTCATACAATGTGGGCTAATTTGTGTACTTAGCTGCTGATTCTGCTAA
CAGCATATTAAAGCATTTTAACAAAGATTTTCCCACCACCAGTGGCAGTC
GCGCTGATCAACAGTTACGGTATCCGCTGGGCCACGCGTCTGCAGGACTT
CCTGACTCTGTGGAAGGTGGTGGCGCTGGTGGTCATCATCATCTTCGGAA
TCATTCAGATAGCCAGAGGTGAGAATAACACATGTGATTGTCATTCTATG
ATATCAAAATATGTTGATATTGTTGTTCGCCTTGTAATGCCGCAGAAGTA
GTACATAAGTCAGCAAGTTTCCTTATAAATTACTGTTTTTGTAGCAGTGT
ATATTTTTACATGGAGGGGTTGCTAGCCCTGCTCCTTTGACGTACTTGAT
CGAGGCAGCTCCTCAGAAAGACAGATGCAGCCCCAACCGAGGTGCCCTCT
CAGGATTTTAACCGGGGTTTCCCAGTTACCAATTCATTGGAACCAGGACC
TCAACTGTGAGGCTGCTTTAACTACCAGTTGAGCTACAGGGACATTGCTG
ATATGAAAATATAGCTTCTATCTAGTAAAGTGTAGTATAGCATATAGTGT
CATGCCAAATTTACACTAACAAGTCTATCTGCCAGGTGATAGTGCATAAG
CAGCTGCCAGGGTTCCACGGTCGCTTCCTGTCTTGTCATCTGGCCCGACC
TGGGCCTCCTGTATCTAACACCATTTCGCAATATTGTTGATAAGGACCCT
AGCTGGATCAAAAACCTACCCATCGCCATTCCCAGGACCTGCCCACATAC
CCGCAAATATTATTACAATCCATCCAGAGGTTATATATTATGCTGATCAC
AAATATTCGGAAACACAAACAGACACATAGAGACGCAGACACACCAAAAC
AATACCTCCATTTTTCATGGAGGGAATGAAAATAATTTTCTGCATGTCAG
GAAGCACTCGGTACATCGAGCCGGCCGCTGCCTTCAGCGGGACGACCTCT
TCCCCTAGCGCCGTGGCCTTGGCTTTCTTCTCCGGACTCTGGGCGTACGG
CGGCTGGTGAGTAACTGGAACAAGCGCAGGCTGGTAACCTTGGTTCAAGG
GTAACTCAGAGAAGACTCCGTCAACGGAATTGGTAACAGCTTTCGTGAAA
CGTCAGTAAAGAAAGAGATTAGAGCAATGACAAGGCCACCGTATCACGTG
CACACAAGAGGATATACATATAGAAAAACGAAGAACCGAAACTAATACTG
CAGTAACGAATGTGTAACCAATTGTATACTTACTTCACGGAACAGCGAAT
ACCTTTATGTTGTAATCCTGACACGTTTACACGTCGTCTTCATTCAGTCT
ATTTCGAACATACGTGCAAAACACATGATCTAATTGCAAAACTTCTTGTG
ACCTACTTTTTATCACCTTTTTCATTCCGTCTGTAGGACCGATTTGAACA
TGGTCGTTGAGGAGCTGAAAGACCCATTCAGGTACGTACACTACTATATG
GCATAAAGATCATCATGGTCCTGCTTACTGTATGTGATGACGCATTGATT
GATTGAAAGGTGTGCGTAGCAATGATACGACCGATCCTGTTTTATGGAGA
AATAAACTGTTCTCCAACTAAAGAATGTGGACTATCCGGAAGTTTCGACA
CGTGACTGTATGCACGCGAGGCGTCGGCAATGGGTCAAAGGTTGTCGGAA
GTTGATATCGCCCCCCGTCCCGGTTGAGAGAACGATGATAACATAAAATA
ATGCATCTTCTTCTCTATTTGTACCACATTATTATTCATAGAGCCTTAAA
AGATGTTGTGAATATTTTTATATTTTCTACTTCGGTTTTTGACAGACTAG
GACGACGTGGCACTGCACTCTCGTTTTTTATAACTTAAATTAACAGTGCC
ACGTACAGATAACAACATACCCATTTTTTATACACCTGGGCGAAGTGAAG
AAAGTCGTGTTAAGTGCTTTTCCCAAGGGCACAACATCGGTGGAGTCAGG
GGGATTCGAACTCGGAACTTCTTGGTTCTGGGCCGAACACCCTGCCGTTA
CGCCACAGGACGTACATTCACTAATTGTAAATATTTCTCAGCTCCAAGAC
CATACAACACAACGTTTTGTTGATTTCAGGAACCTTCCCTGGGCCATCGC
CATCTCCCTCCCGCTGGTGACGTCAATCTACATCCTGGCTAACGTCGCCT
ACTTCACCGCCATGTCACCTACCGAGCTCCTCAGCTCGGACGCCGTGGCT
ATCGTACGTACAAACACTTGCCTTATCAAGGAGGTGCTATAAAAACGTTC
ATAATTTGTTATAGCATTCAAAACCTTTCCTGCAATGTCCTATTTCATTT
AATCATATCAACTAGTCTGACTTAGGGAGAAGAGATGTTGATCTATACCT
GTAGTGTGTGTTAGTTTAGTAAGAAAGATAAAAATACTGTTATTCACTCT
CCTTTTGCATATAAAAGGATATAACGTTATGTAATATAGAACTAGAACTT
ACCACACACCGCCAACCGTCCGTCTGGACCCAATTAATAAAATCCTTCTC
CACATGTCAACGACATGCTAAGAATAGTTTAATGACTCAGTATAGACATA
CAGAAATAGATTGTCCTGAAATGAACTTGAAGGGGTCAAATCTGCAGGAT
GACGACTTAAGTCGTTCCATGTGGAAGTACCTTCTTTGGCATTCTTAAAG
ATGGCAAGGGTAAAATGTGGTGTCATGTGTCAAGTTCATGCTGTCTCCTG
TTGTGACTGTGACAGTGATCCCCTTGCCTCTACTTCTGTGACAGACCTTT
GGTGACCGGCTGTTGGGCGTGATGAACTGGCTAATTCCTCTTTCCGTGGC
GCTGTCGACGTTTGGGGGACTGAACGGTGGCGCGCTTACGTCATCACGGT
ACGTGCACACTTATAACAATAGTTCTATGTAGTCGGTGAATAGTTTCATC
GTTAGTTAGTAAGTTACTAGATAGCAATGTTATGTCTACACAACCAAGTA
TATCACGTAAGCCGACGTTTCGGTGACTGCCTGTCACCTTCCTCAGGGCC
ACACCGTAATCATGACTGGTTTTACTTCCCACTGCAGCTAGGTGTCGCTG
CTGCAGTGTGAAAGATGTGTGATTTGAGTTTACGAGACCCCCCCCCCTCC
TCATCACAGTCATGACGTTATCCAGTTCTGTCTAGTCATTATGGTATGAC
AGATCTGAAGGCAGACACTGCAGGAAATGAGACCATAAGTAATGATTGAC
TGTACAAATGTATGGGACCTCACAATCAAACAGTACATGTGTCTAACAAA
ACTATTGATACATTAAAACGTACTAACCCTTTTCAATACTATCCCACCAG
GTTGTTTTTCGTCGGCGCGCGCGCAGGACACCTCCCTGAGATCATGGCAA
TGGTTCATGTCCACAGACTCATGCCCGTTCCTGCTATCATGGTGGCGGTC
AGTAGTGTCTGTTGTGGTTCAGAAAAATGATACTGACTTCTAAGTTTGAA
ACTAGAAAATCATAAGTATCTGCATTAGCAAATACAGACATGTTCGCGCT
GTATTGTAATTGCTGCAGGGAGAAAATTGTAAGTAGGTGACATGATTTGA
GATGGTGAACGTTATATGTTGTCATTGATCGATCTGGCAGAATTCTAAGA
TTATGCTTTCAGTATTTGGCCAGCTGCAGATCGGCCTTGCTGAAGCGTCG
ACTAGTAATCTACGATAGTACTGCAGCCTTATCAACAGACCTGAAACGAG
ATGGCGACCTTAAAGTGTCAGAATCCCAAATAGCATCGCTTTGTGAAGAA
AATTCTCCTTAAAAGTGCCAATCACGTCTTTTTCAGACCGCTCTGATGCT
GATAATGCTGAGCACATCGGACGTGTACACCCTGCTGAACTACATGGGGT
TCGTGTACTGGTTGTGTATCGGCGTGGCTTGTGCGGGACTTCTGTGGCTG
AGATACAAGCAGCCGGACTTACCAAGACCAATCAAGGTATACCCGCCCTT
CCCCCGGGCTGTTACAAATACTAAGTGTTGAATCATTCTCTACGCAGATC
CTCACCGGCAGCTCATACAATATTCCTTGGAGAGGCTCTGCTAAACCAGG
CTGAAGTTCCACTTTTGTGGGCGTGACCACTAACTACCAAGTACACCAAC
AGCAGAATTCTGCTTTACCTATGTATACCACTCTTTGATTGGCTTATAAC
TGGTTAGCGTCTACGCCTATAGCTACAAACGTGGAAACCTCAGCCCGGTT
TAGCAGAGCTTCCCCAAGGTATATATCGTACAGGCAACGGGCGAGGCTCT
GTAGCCTGATTGCCATCCGGTTTAGTTCCAGGCTCTACCTTCACCTGAAA
GGTAGAGCCTGCAACTAAACAGGATGACACTCAGGCTAGAGGCTCTGAGA
AGGACTCCAGACCAAGACCTTGTCCAAAATTAGAAGATATTGGAAGAATA
GGTCTTCAGTTTAGCATCAAATGATAGAATATACCAAAGCTTGTCGATTG
AGTGAAATATAACATAATAAATGTGATTCTGATAGTGTGTGATTATAGAT
AACGTTACCATATGTTATATTGCAGGGGGAAAATACATTGTTATCTTAGG
TCCTTTACTAAATGGTGTCCCGACCTTTTTATCTTTAGGTTATACAAAGT
GCATAATGATCCCAGATCAAAGTTTGCTAAGTACTGTATACAAACTGACA
TCTCTATTCTTGTTAGATCAACCCCGCCATCCCGGTGATCGTTACCCTGG
TGTGCGTCTTCGTGGTGGTGATGTCGGCCATCTCTGCGCCGATAGAGGCC
GCTATTGGACTGGCCATAGTGCTGAGCGGTGTACCTGTGTATTTCCTCTT
CGTGTGGTGGGACAACAAGCCGAAAGCGTTCCGCAGCTTCATAGGCAAGT
CTCACGAGTTCTGCTACGGGGGTTCTGGTTGTTCCCGGGGTCTGGCCGTT
CGCCTGCAATGGAGTCTGTTTTTTTTATCATATAGGGCTTTTCTGTGTAA
TAAAAGCGTACTTTTGAGAATACGCATACTAGAATTCGCTTTGTAAACTT
GTATATCTTTTGCTTGGTCAAAATGGTACTGATGCATTGACATCAGTGTA
TAGGGCAGGTGTAAAACAAACATTCTAGATTAGAAGTGTACATTGAGATC
TGATTGTGATTTTTTTCCGTTCTTTTTCAGATTTTATCACCACGAGACTG
CAGCTGCTCATGAACGTTGTGCCCACAGACGACCAACACTCGGACTGAGA
GTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN Coding sequence (CDS) from alignment at Sc0000168:234669..241753+ >Blg01662.0 ID=Blg01662.0|Name=Blg01662.0|organism=Branchiostoma lanceolatum|type=CDS|length=1506bp|location=Sequence derived from alignment at Sc0000168:234669..241753+ (Branchiostoma lanceolatum)
ATGGGGAAGAAAGCTGCAAGTTTTGATGTACAGTCCGCGTCGTCTGCCGA
CGCCTCAGCCGAAGGGAAGGACCCAGCGGCGGACAACCCCGCGGGCTCGG
TTCGACTGAAGAGAAAGATCACGCTCTTCAATGGGGTAGCGATCATCGTG
GGGACCATCATCGGATCTGGAATCTTCATCTCGCCGAAGGGAGTCCTCCA
ACAGACCGGGTCGGTGGGCCTGTCTCTGGTGGTGTGGGCGCTGTGTGGGG
TTCTCTCCACTCTTGGTGCCTTGTGTTACGCCGAGTTGGGAACCACCATT
CCCAAGTCTGGAGGCGACTATGTGTACATACTGGAGATATTTGGACCGTT
AGCGGCTTTCCTGAGACTGTGGGTGGAGCTGATAGTGGTCCGGCCGACGT
CGCACGCCGTCACGGCCATCACCTTCTCTACGTACGTTATGTACCCGTTC
TTCGCGCCGTGCCCTCCGCCCGACATCACCATACGGCTACTAGCGGCAGC
CGCCCTCGTGGCAGTCGCGCTGATCAACAGTTACGGTATCCGCTGGGCCA
CGCGTCTGCAGGACTTCCTGACTCTGTGGAAGGTGGTGGCGCTGGTGGTC
ATCATCATCTTCGGAATCATTCAGATAGCCAGAGGAAGCACTCGGTACAT
CGAGCCGGCCGCTGCCTTCAGCGGGACGACCTCTTCCCCTAGCGCCGTGG
CCTTGGCTTTCTTCTCCGGACTCTGGGCGTACGGCGGCTGGACCGATTTG
AACATGGTCGTTGAGGAGCTGAAAGACCCATTCAGGAACCTTCCCTGGGC
CATCGCCATCTCCCTCCCGCTGGTGACGTCAATCTACATCCTGGCTAACG
TCGCCTACTTCACCGCCATGTCACCTACCGAGCTCCTCAGCTCGGACGCC
GTGGCTATCACCTTTGGTGACCGGCTGTTGGGCGTGATGAACTGGCTAAT
TCCTCTTTCCGTGGCGCTGTCGACGTTTGGGGGACTGAACGGTGGCGCGC
TTACGTCATCACGGTTGTTTTTCGTCGGCGCGCGCGCAGGACACCTCCCT
GAGATCATGGCAATGGTTCATGTCCACAGACTCATGCCCGTTCCTGCTAT
CATGGTGGCGACCGCTCTGATGCTGATAATGCTGAGCACATCGGACGTGT
ACACCCTGCTGAACTACATGGGGTTCGTGTACTGGTTGTGTATCGGCGTG
GCTTGTGCGGGACTTCTGTGGCTGAGATACAAGCAGCCGGACTTACCAAG
ACCAATCAAGATCAACCCCGCCATCCCGGTGATCGTTACCCTGGTGTGCG
TCTTCGTGGTGGTGATGTCGGCCATCTCTGCGCCGATAGAGGCCGCTATT
GGACTGGCCATAGTGCTGAGCGGTGTACCTGTGTATTTCCTCTTCGTGTG
GTGGGACAACAAGCCGAAAGCGTTCCGCAGCTTCATAGATTTTATCACCA
CGAGACTGCAGCTGCTCATGAACGTTGTGCCCACAGACGACCAACACTCG
GACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01662.0-exon-Sc0000168-1570713199:234669..235764 | Blg01662.0-exon-Sc0000168-1570713199:234669..235764 | Branchiostoma lanceolatum | exon |
| Blg01662.0-exon-Sc0000168-1570713199:236561..236686 | Blg01662.0-exon-Sc0000168-1570713199:236561..236686 | Branchiostoma lanceolatum | exon |
| Blg01662.0-exon-Sc0000168-1570713199:237419..237524 | Blg01662.0-exon-Sc0000168-1570713199:237419..237524 | Branchiostoma lanceolatum | exon |
| Blg01662.0-exon-Sc0000168-1570713199:237905..237949 | Blg01662.0-exon-Sc0000168-1570713199:237905..237949 | Branchiostoma lanceolatum | exon |
| Blg01662.0-exon-Sc0000168-1570713199:238598..238721 | Blg01662.0-exon-Sc0000168-1570713199:238598..238721 | Branchiostoma lanceolatum | exon |
| Blg01662.0-exon-Sc0000168-1570713199:239263..239366 | Blg01662.0-exon-Sc0000168-1570713199:239263..239366 | Branchiostoma lanceolatum | exon |
| Blg01662.0-exon-Sc0000168-1570713199:239819..239915 | Blg01662.0-exon-Sc0000168-1570713199:239819..239915 | Branchiostoma lanceolatum | exon |
| Blg01662.0-exon-Sc0000168-1570713199:240305..240454 | Blg01662.0-exon-Sc0000168-1570713199:240305..240454 | Branchiostoma lanceolatum | exon |
| Blg01662.0-exon-Sc0000168-1570713199:241185..241362 | Blg01662.0-exon-Sc0000168-1570713199:241185..241362 | Branchiostoma lanceolatum | exon |
| Blg01662.0-exon-Sc0000168-1570713199:241649..241753 | Blg01662.0-exon-Sc0000168-1570713199:241649..241753 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000168 | genome | Sc0000168:234669..241753 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01662 |
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