|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000168:107562..113614+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01658.5 ID=Blg01658.5|Name=Blg01658.5|organism=Branchiostoma lanceolatum|type=mRNA|length=6053bp|location=Sequence derived from alignment at Sc0000168:107562..113614+ (Branchiostoma lanceolatum)
TGAGTATATACATGTACTAGTACATCAGTCAATGTCATTCTGTTTGCCCC
AAATTTCAGAGTTGGCACGTGCCACGCCCATTTATAGACAGCCCACCAAT
GAGGTTGTAGTAACCCGCAACACAAACACTGACACACGATACAAATGATC
GGCTTCGCAGAGAAGTCAGTCGGTTGTAGGAGCAGGCTTGGCTGGTGCGA
GACGTAAGTTGAGCTCCCACGAATGCGAGCTATTTGCGGGCTAGGCGGGA
ACACCAACCATACTTCAAACTAGTGGAGAAGCAGACGTAAGGGAGGGGCG
ATCCAGACTACTGTAGCCATGGAAGGGCCGGATTTGGGCGCGTTTTCGTT
CGGACTGGACGATCTAGCCGAGGCGTTCGCCTCTCTGTCCATGTTCCCGT
TATTCGAGATCGCCCACTACATACTGATGTGCCAAGCGGTCAGGTCGGAT
TCAGGTAACGTAGCTACAGTTTCATCAAATTTCAAAACTGGCTAGATGGT
AAACGTGGCAACTGTTGGCTATCTACTTCCGCCATTTTGTCTCAGCGCGC
TTTTGGGCGAGGTGTGCAGGTAAACGTTACTTTTGGGGTGAAGAGAGGTC
AAATGCAAACGTTACTACGCCCACTAAAGGCTGTAATACACGTATGCACA
CTGATAACAAATGTATATCAGCAAGTGGAGATAAAGGGAATTGATAATCG
ATAACGAGAGCTCTACTGTATGTCAGCTAATCTTTTGCGATGTGAATGGA
ATTAATTGGGGCAAGGAGGTCTCTATTTCCTTGATTGGGGGTAACGCCCA
CCTTTTTTGCATGATGTTTACCTGGTAGCGGTTGTATTGAATTGTAACAA
AAACCGAGAAAGGTCACGTGAATCATATTAATTATTTCCAAAATTTGAAG
AAAAAAAAACACATTTTGTTTGTCCCTCAGAAATATATAAATAATGTTAT
ATGTATTAACATATGAACTTGGTTGACTTGAAATCGAAATTTCAATACAT
TCTATAACTTTATATGCACCATAATATGAAACAACAACAGTTGTCACTGC
TCTATACAATGTTATGTCCTACCTCTCTTCAACCTCCATGCATACACTTA
TTACTAACTGGTGTGTGTTTATTTGCTCCCTTAGGAGGACTGACCCTGTC
CAGGAAGCACCCCCTGGCCAACTGGGTGTGCTGCATGTTGATGTGTTCAG
CAGGGGGGTTCATCAGCAGCCTCCTCCTGGGGTTACCATTGATAGGTCCA
CTCAGCAAGACTCCAAACGTTCTGCTGGCTTCTGCAATCTGGTAAGTTGC
ACTTCATGCAATGTTAATTACCATTTATCTGCCGGGTTACATAAATCTGA
AAAACAGTAGGTTTGAGAGATCTTTAGTGCAGCACTCCCCAGGTATGCAC
AGTTTAGATATACAGGAGTAGATTATACTGGGGAACGTTGGGTTGGAGAT
CTATTTGGATGTATCTTTTTAGGTTGGCGGGATTATGTACCCTGGTGGAA
TTATGTTAGTAATTGATAGTTAAATGGGGGTGAGACAGGTTATTTGTACT
TGCTCTTCAAAATTGTATTTTCGGAATGAATTCTTTTAATCCATAAGTGA
AACATTTCTCATTATATTGACAATGAATGACCCACTTTTTGAGGTAAATT
CATAACATGTTAACACATTTTTGGCATTATTCTGATGTTAAAGTTTGAAA
TCTAGCCATATCGTTCACCACTACACCATCCTGTTCAATACAACACCGTT
GTATACTTTTTCTAAGAAAGAGAATGGTATATGCTAACATTCCCACAATA
TATGAAGGTGAGTGTGTTGGTGTTTACCCAAGTGTGTTGACGTTTCAGGT
ATATTTTCTATTTCCACAGGTACGTGGTGTTTTATGCACCATTTGATGTC
TTTCACAAGGTGGTGACTTTCCCACCGGTACTGATGCTTGTTTACTGTGT
GAAGGAGCTTCATCGTTCACATACGATACTGGGAGGAGTCCTTAACGCGC
GGAAGGTGTATTCCTCTGGCATCATAGTGCAAATTTGCATTGGCATTGTG
CGTGGTAAGTCGGTCATCAGCAGGGACTATCTACAGTGCTACTTCTTCAT
CCAGAATTGAATTTGATGTTGAAAGCATCACAGAGTCGAAATACATCTTA
TCATCGTCAATGCATGATTTTTTCTGAACTCCCAGAAAAATGATGTGGAA
AACCAGTAGACAACTGTTGTTGTTTGCTGTTGTTCACCTTGTAGAGCCTA
GTGGCACATAGGTCAGCAAGTTTCCTTGCTGTTTCTGCAGCAGGGTATAT
TTTCACAGGGAGGGGTTGCTACCCCCTCCCCTTAACAAAGGACCTCAAAC
AAAGGATCCCCATTTTACGTCCCTTCCGAAAGACATGTGCAGCACTAACC
GAGATGTCCTGTCCGTACTGTATTACCATTAGATTGTGCTCTGTGAACAA
ACAAATTCCATTTTGGATGAAGTTTGTAGCTTTCAAGGTGGTCCCATTTA
ACATTGATTAACCTGTTACCTTTACATCCACAGCAGCTGCCACCAGTTGA
ATACAAGGGAACAGAAGGAAACATTCCATCACCAATGGAACCTGTCTCAT
GCCTTCTCTTTTATCCACTGTGTTTTTACCAGGTACCTTGAGTTTTATGC
TCCATTCGACCTGTTCCACAAGGCGGTGACTTTCCTACCAATAAAACTTG
TCGTCGTCAGTCTCAAGGAAATCCGCCGGGCACACAAGGTGCCTGATGGT
ATAGCAACGGCAGCTAAGGTCCATCCTCATGGCTATGTAGCACATGTTGT
CATTGCTTGTGTCAAAGGTAAGGGGCCTAATACTTCACAAAGTAGGCTTG
GAACGTGCACTGCTTGTTGCTGATTACCCTCCCACAGACAATTCGTTCCT
GAGTTGCCTTTATGTTTTTCGTTGTTTTAGGCATGATTAACTAACCACTA
GGTTAGTGTTTAAAGACACTCTGTGTGTGTGTGTGTGTGTGTGTGTGCTG
AATAATCAAGAGCTGCCTCTTTCACAAAGGTTTACAGAAAGGAGGAAGAA
ATCTTTGATTCTAGGGCTTTCCCGTCCCCCACAAGATTCCAACAATGCAC
TACTTTTGTTTACCTGAATATTGTTTGCCCTTTTTTGTAATTTTTTTCCT
GTCGTTTCTGCTTGAAAGAGATGACGTACAATATTGTTTTGATTGATCAA
GATTTGCTGCTGATGTTTGGTTGGAGTAGTATTACCGCTCGTTGTGTGAA
TGTGATCATTGCAGTGTGATTAACATACTAATCCCCCACTAAGACAAGTA
GTGCCTCCTTGCAGTGTTTTGAAATATTGCAATTTTTGCCAACTTTGGCT
TGCCTTACATAAGTTCTTTTTGACAGACAACAACAAGGCCAAGAAGAATT
TATGTACTTGTCCAGTGTGGCATCACCATTGAATATGAGTGTTGTTGCTT
GTTGTAATGTATAGGTGCGGGTAGTGGCTTCATGTTGAACTTCCAACGGC
TGGTCAGAGGGAAATGGTCGCCAGAGACGAATCAGATTCTTCACCCAACA
GTGTGAGTATCAACGCATGTTTTGTAAATTGATATCTTCAACTTTCAAGG
ACTTTTCACCAAAATTCCCTTTTGGTCTTATGGCTGGTCTAGAATGATTG
AAGTAGAAATGAGGCCACAAGATGTGGTGCTTTCATGTAGTAAAGATTTA
GCATACTGTAAGTCTTGAAACATTCACAGTGGTTTTATTTTTGCATTGAC
CTCTCCACTACAAATTTATAACATCATGAATAAGCATTTTCTGTACTGCA
AAATCGTTTCGACCGTTAATTGAAAACATTGCAAAAAACTCCTTTTCCCT
CATAACGTTACCGCAAAATGAAACCATAGCAAAAGTGAATGAATTTACGG
TAATCATTTCATTTCATCTTTCCAGTGTGTTGAAGGAGTGCCTTATATCT
GCCATCCTGTTCACCCTGCCCACTGGGGTACTGCCAATCAACCAGGATCA
GCTTCTCCTTCTCACCGGCATTGTCATGGTCGCTGTCAAGGTCACCTTGA
CTCTCACAAACGTCGGCGACCCCTTCAAGCCAATAGAGAACGTTCTGTGT
ATGCCCATATTTGGTAGGGCAGAGGTCATGGCAGCAGAGAAGAAGAAGAA
GGAATAGACATAAAACCTGAACCTTTGTATTTTTGGAACCAAAGTGGTTT
AAGGTAACTCAAAGTCAAACAACAAATGTAATGACGAAATTAATGTATAA
TTTTGGTGACTGTTTTTTCAAAGGGAGATTGTGTAGAGGTAGATCCAGTC
AGCACTGAATGCTGTTCGAATTAGGAAGGGATAAAGTATATTTGTGCACA
AAAGTATAAACCAAAGTCGTGTTTGGCACCTCAAAATCTCCAAAAAAGTG
TCAAATAAGGACATTGTGTCACTCTCGGTGTGCCATACCAAAAGTTTCAA
GGTAGACAGCAGCGAGTGTTAGAAGCAATAAGGTATGAAATGAGTACAGT
TGTTATCTTTCATAATTATTGATGTTGCAACCTTTCCAATAAACTCAAAC
TCTCCAAAAAAGATTGCCAAATCATTTTGATGAAGCACACCTCTTTGAGA
ACATCTCCAAATGTTTTGACCCAAACTGGTAAAGGTTTATACTTACATTA
TCCACAGTGTGATGACAATTGCAATGTATCTTCTCAGTTGTGGTTGTTTT
ATGAGGGCTGACATGCACATGTATATGTACTTATACACTGTTAGTATGGC
TCACAGCATCCTCTCAAATTTCTGTTAACTTGTTTCTAGGATGTGGGCAT
TGTAACTTTTGTGAAAATGGAGTACAGTGTTTTCAGTTTGTGTATGTTTG
TTTGTTTGTTTGTCATGGTGTGTGTCCACAGCTGTGTCTGCATTGATGTG
TCAAATTATTGCTCGCCATCTGTTGAGTGTTGTCTATACAAAAGACTGAA
ATTGTAATGTTTTATATCTTGATTTCATCCATGAAATAAAGTTCATACAG
CCATAATCAGCACTGATTATAGATCTATAACACGTTAGCTGTTTGGACTC
TCTGCATTTACTTCAGATTGAAAAAAGACCACTCAGGGGACAGATAGAAT
CTGGTCTTTGTAGACAGGTGGACAGGAATCTTAATGCTTGTGTCAATGGG
AAAATTATCTAAGGGACCACCAAAAAATGGTCACATTGGCCATGCAGGTG
GACCTTATATACAGGTTTGACTGTAGTCTTGTATGTATTTCAGTAGATAG
CTTCTTTGGTTCGTAGCCAATCATAGGTCTCTGGATTTGCATATTGTGAA
ATGTGCCATCTTGTATGCTTTTTCACATTTTTTCTCCACTTTATAAGGAA
GTGTAGGTTTTCTGAAAAAAGAATATGAGTACATTTCCCCATGTCTTACC
AGAAACAGCTTCTTGTAATGGTGCCACCTATACACGAAAGACTTTGTAAG
TATTGCAATACAAATGCCGTGGAAGACGAAATACACTTTATTTCAAACTG
TTCATTTCATGATAATGCACGAAATGAGTTGTCTATTCAGACCACTAAAA
TCTATCCGAATTTCCCTAAGCTTACAGACAAAGAAAAGACTATTCTTCTT
TTAACTACCAAAAACCCACAAATTATAGAAAAGGTGGGACATTACGTCTT
CCATTGCTTACAAAAGAGAAGTCAAACCCTTCCCTAGTTATAGACAATTA
CATTTGTATAATTTAGATAAGCAGTTTTTATACCTATTTTGTACACTGTT
CTTTTATGTATGTTATTTGCATTTAGCCTTCGGGCATGAATTTGCAATAA
ACTTATTATATTACGGTACGTTCCATTTGCATCTATAAGGCCCATGGGGA
AAAAAAAGACTTACAAACTTCCTATAGTATGTATTCAATAGCTGGAAAAA
AACATGTGCTGGGGCCTTTGGTAACAACATGGCTTTAGTACAATGTGTGG
ATATTAAGTGAAATGTATGAAGTTTTGCTATAATACTAGTGATATTTCTA
TATCGCCGGTAACTTTGATATACCATGAGACAGCAATAAACATTTTCTCT
GCG Coding sequence (CDS) from alignment at Sc0000168:107562..113614+ >Blg01658.5 ID=Blg01658.5|Name=Blg01658.5|organism=Branchiostoma lanceolatum|type=CDS|length=783bp|location=Sequence derived from alignment at Sc0000168:107562..113614+ (Branchiostoma lanceolatum)
ATGCACCATAATATGAAACAACAACAGTTGTCACTGCTCTATACAATGTT
ATGTCCTACCTCTCTTCAACCTCCATGCATACACTTATTACTAACTGGTG
TGTGTTTATTTGCTCCCTTAGGAGGACTGACCCTGTCCAGGAAGCACCCC
CTGGCCAACTGGGTGTGCTGCATGTTGATGTGTTCAGCAGGGGGGTTCAT
CAGCAGCCTCCTCCTGGGGTTACCATTGATAGGTCCACTCAGCAAGACTC
CAAACGTTCTGCTGGCTTCTGCAATCTGGTACCTTGAGTTTTATGCTCCA
TTCGACCTGTTCCACAAGGCGGTGACTTTCCTACCAATAAAACTTGTCGT
CGTCAGTCTCAAGGAAATCCGCCGGGCACACAAGGTGCCTGATGGTATAG
CAACGGCAGCTAAGGTCCATCCTCATGGCTATGTAGCACATGTTGTCATT
GCTTGTGTCAAAGGTGCGGGTAGTGGCTTCATGTTGAACTTCCAACGGCT
GGTCAGAGGGAAATGGTCGCCAGAGACGAATCAGATTCTTCACCCAACAG
TTGTGTTGAAGGAGTGCCTTATATCTGCCATCCTGTTCACCCTGCCCACT
GGGGTACTGCCAATCAACCAGGATCAGCTTCTCCTTCTCACCGGCATTGT
CATGGTCGCTGTCAAGGTCACCTTGACTCTCACAAACGTCGGCGACCCCT
TCAAGCCAATAGAGAACGTTCTGTGTATGCCCATATTTGGTAGGGCAGAG
GTCATGGCAGCAGAGAAGAAGAAGAAGGAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01658.5-exon-Sc0000168-1570713199:107562..108852 | Blg01658.5-exon-Sc0000168-1570713199:107562..108852 | Branchiostoma lanceolatum | exon |
| Blg01658.5-exon-Sc0000168-1570713199:110194..110378 | Blg01658.5-exon-Sc0000168-1570713199:110194..110378 | Branchiostoma lanceolatum | exon |
| Blg01658.5-exon-Sc0000168-1570713199:111026..111113 | Blg01658.5-exon-Sc0000168-1570713199:111026..111113 | Branchiostoma lanceolatum | exon |
| Blg01658.5-exon-Sc0000168-1570713199:111487..113614 | Blg01658.5-exon-Sc0000168-1570713199:111487..113614 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000168 | genome | Sc0000168:107562..113614 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01658 |
|
