Blg01366.0 (mRNA) - B. lanceolatum

Overview
NameBlg01366.0
Unique NameBlg01366.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000051:226862..228803+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01366.0 ID=Blg01366.0|Name=Blg01366.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1942bp|location=Sequence derived from alignment at Sc0000051:226862..228803+ (Branchiostoma lanceolatum)
ATGCCGACCTTTTTCGTCCGTAAGTCAAGTCTCATGGAACGGAACTTCTC CTTTCCAAAACTGCAGCAGGCCCATTCTAAATTTCACATCCGAAGAGTTC GAAATCCTTCCCAATGGTAGTGTTCACCTGGTCAGTTCTAACGTGTCCTG CCCAGATGAGCAGGTGGCCATTCTGGACACAACAGCGTCAATCTGCGGAG ACTGCCTACTGGAGTATTTTTCAAACGACACGCGCGAACCCTGGGATGCT AACCAGAGTTGGTTAACCCTGGGTCTTGTGATCGTGTCTGACGTAGCCGT GTTTGGTTTCGTGGTCCACACCGTCAGGTCTGGTCAGTGGAAAAAAGTCC CAGCAAAGCTGAAGATGCAAATGATGATATGCATGGCAGCTGCGGAATCG ATGTTCGTGATACGTGCATTTTTCTCTCCCGGACCGGGCTGTACAGCGTA CGCGATACTTCTGCACTACCTCATGCTGACTGCCTTCACATCCATGAACG TACTAGCCGTAGATCTCTTTCTTACATTTCGTGATAGCTCAGAGAGGGCG GAACTGTACAAGTACCTCTTGTATACCTGGCTGGTGCCGGTACCTGTAAT CCTTGCCACAGTGATTGTGGAATTCGGCAGTTCTGTCAGGGTGGGTTACG GGGAGAGCTGTTGGATCGGCAATCCTACAGCCAGTCTGGTGGCATTTGGA GTCCCCGTCTTGTGTGCCCTTATGATCAATGCTGTCTGTATCAGCCTCGT CTTGCTGGCCATACGGAAGTCATTTCAGATCGCTAACAAGGCTTTGCCAC GCTCGCAGATCAGTAAGGTCTGGGTCTACATGCGTATCTCGTTCCTGATG GGGTTCACCTGGTTCCTGGGTTTCATTTTCCCTTTCGCCAACAGCAGCGT TCTCGAATACATCTTTATTGTGCTGAACGCTTCTCAAGGCCTTCTGCTGA CACTGTTGCTGACATTGACGGGGGAGGTGGTACAGGAATGGAAGTCTGCG ATCAGGGCACGCTTTGGTCTGGCTGATCCTCATCAAGACAATGGACGAAC CGCCACTACCAGCAACCGGCGGACCACCGGCGGGAGCACTGAGGTAACGG CATGTGGAACCGGCTCTGCTATAGAAATACCCATGAAGGTTATGGTCGAT GTAGAGGAGAACAGAGCACGCCTTCATCTGTGTCAGCCTCAGCGGGGCAG TGCACCAACCGCCCCTGCCAGGAAACAGCAGGCCAACCCAGGGGAAACTG AGGTGACGGCAGGTGGAACCGACTCTGCTACAGGAAAACGCATGGCAACT TCTGCTGATGTACATGTAGAAGAGGAGAGGGCACCTCTTCAACTGGAGGG AGCTATTCAGGGGAACGGAAAAACCACCACTGTTGGCAACCAGCAGACCA ACGCAGATGAAACTGAGGCAGAGGCAGATGAAACCGACTCTGCTGCAGAA AAACCCATGGCAACTTCTGCTGATGTGCATGTAGAGGAGGACAGGGAACC ACTTCAACTGGATGAAGGTATTCAGGGCAATGGAAAAGCCACCACTGATG GCAACCAGCAGATCACAGCAGATGAAACCGACTCTGCTACAGAAAAACCC ATGGCTTCTGCTGATGCACATGTAGAGGAGGACAGGGCACCTCTTCAACT GGATGGAGCTCACCAGGACACCGGGAAAGCCACCACTGTTGGCAACCAGC AAGCCACCGCAGGAGGAGCTGAGGTGACGGCAGGTGGAACCGACTCTGCT ACAGGAAAACGCATGGCAACTTCTGCTGATGTGCATGCAGAGGAGGACAG GGCACCTCTTCAACTGGATGAAGCTCATCAAGACAACGGACAAATCACCA GTGTTGGCACCCAGCAGACCATCGCAGGTGAAACTCAGAATATGCCAGAT GAAACTGACACCGGAAGCAACCCGCAGACTCGCACATGTTGA

Coding sequence (CDS) from alignment at Sc0000051:226862..228803+

>Blg01366.0 ID=Blg01366.0|Name=Blg01366.0|organism=Branchiostoma lanceolatum|type=CDS|length=1806bp|location=Sequence derived from alignment at Sc0000051:226862..228803+ (Branchiostoma lanceolatum)
ATGCCGACCTTTTTCGTCCATGAGCAGGTGGCCATTCTGGACACAACAGC
GTCAATCTGCGGAGACTGCCTACTGGAGTATTTTTCAAACGACACGCGCG
AACCCTGGGATGCTAACCAGAGTTGGTTAACCCTGGGTCTTGTGATCGTG
TCTGACGTAGCCGTGTTTGGTTTCGTGGTCCACACCGTCAGGTCTGGTCA
GTGGAAAAAAGTCCCAGCAAAGCTGAAGATGCAAATGATGATATGCATGG
CAGCTGCGGAATCGATGTTCGTGATACGTGCATTTTTCTCTCCCGGACCG
GGCTGTACAGCGTACGCGATACTTCTGCACTACCTCATGCTGACTGCCTT
CACATCCATGAACGTACTAGCCGTAGATCTCTTTCTTACATTTCGTGATA
GCTCAGAGAGGGCGGAACTGTACAAGTACCTCTTGTATACCTGGCTGGTG
CCGGTACCTGTAATCCTTGCCACAGTGATTGTGGAATTCGGCAGTTCTGT
CAGGGTGGGTTACGGGGAGAGCTGTTGGATCGGCAATCCTACAGCCAGTC
TGGTGGCATTTGGAGTCCCCGTCTTGTGTGCCCTTATGATCAATGCTGTC
TGTATCAGCCTCGTCTTGCTGGCCATACGGAAGTCATTTCAGATCGCTAA
CAAGGCTTTGCCACGCTCGCAGATCAGTAAGGTCTGGGTCTACATGCGTA
TCTCGTTCCTGATGGGGTTCACCTGGTTCCTGGGTTTCATTTTCCCTTTC
GCCAACAGCAGCGTTCTCGAATACATCTTTATTGTGCTGAACGCTTCTCA
AGGCCTTCTGCTGACACTGTTGCTGACATTGACGGGGGAGGTGGTACAGG
AATGGAAGTCTGCGATCAGGGCACGCTTTGGTCTGGCTGATCCTCATCAA
GACAATGGACGAACCGCCACTACCAGCAACCGGCGGACCACCGGCGGGAG
CACTGAGGTAACGGCATGTGGAACCGGCTCTGCTATAGAAATACCCATGA
AGGTTATGGTCGATGTAGAGGAGAACAGAGCACGCCTTCATCTGTGTCAG
CCTCAGCGGGGCAGTGCACCAACCGCCCCTGCCAGGAAACAGCAGGCCAA
CCCAGGGGAAACTGAGGTGACGGCAGGTGGAACCGACTCTGCTACAGGAA
AACGCATGGCAACTTCTGCTGATGTACATGTAGAAGAGGAGAGGGCACCT
CTTCAACTGGAGGGAGCTATTCAGGGGAACGGAAAAACCACCACTGTTGG
CAACCAGCAGACCAACGCAGATGAAACTGAGGCAGAGGCAGATGAAACCG
ACTCTGCTGCAGAAAAACCCATGGCAACTTCTGCTGATGTGCATGTAGAG
GAGGACAGGGAACCACTTCAACTGGATGAAGGTATTCAGGGCAATGGAAA
AGCCACCACTGATGGCAACCAGCAGATCACAGCAGATGAAACCGACTCTG
CTACAGAAAAACCCATGGCTTCTGCTGATGCACATGTAGAGGAGGACAGG
GCACCTCTTCAACTGGATGGAGCTCACCAGGACACCGGGAAAGCCACCAC
TGTTGGCAACCAGCAAGCCACCGCAGGAGGAGCTGAGGTGACGGCAGGTG
GAACCGACTCTGCTACAGGAAAACGCATGGCAACTTCTGCTGATGTGCAT
GCAGAGGAGGACAGGGCACCTCTTCAACTGGATGAAGCTCATCAAGACAA
CGGACAAATCACCAGTGTTGGCACCCAGCAGACCATCGCAGGTGAAACTC
AGAATATGCCAGATGAAACTGACACCGGAAGCAACCCGCAGACTCGCACA
TGTTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01366.0-exon-Sc0000051-1570713199:226862..226880Blg01366.0-exon-Sc0000051-1570713199:226862..226880Branchiostoma lanceolatumexon
Blg01366.0-exon-Sc0000051-1570713199:227017..228803Blg01366.0-exon-Sc0000051-1570713199:227017..228803Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01366.0Blg01366.0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000051genomeSc0000051:226862..228803 +
Properties
Property NameValue
GeneIDBlg01366