Blg01353.3 (mRNA) - B. lanceolatum

Overview
NameBlg01353.3
Unique NameBlg01353.3
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000051:1423382..1426027+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01353.3 ID=Blg01353.3|Name=Blg01353.3|organism=Branchiostoma lanceolatum|type=mRNA|length=2646bp|location=Sequence derived from alignment at Sc0000051:1423382..1426027+ (Branchiostoma lanceolatum)
ATTAGGATTCACATTTGCATCGCCCACTGCAAATTTGGTGATCATACATC CTACTGTTTGGAATTTCTATTGGTGGATGAGCCCCCTTCGAGGCCCAAAG AATCCCCAAAAGCCCAGTCTAGATAGGGTTAAGCCACACATTGCATTAAC TACTAAAACTTCAGACGCAACCAAAAACATAACCTTCTTTGCAAAGGTAT TAATGATGCATAGACCATCGCTCTGTCGAATAACATTTTGAGACGTTCTT TAACGGCCCAAATTGCTGTGCTAGGGTCCGGACATCGTGCTTTAAATTTT GTAAATTACCTTTAGTTCTTGCAGTGACCAAGGTTATATGCCACAACCTT GCTGCATGATATACATTTACAAGCAGTCAAAGTACTATTCTAATTCAGGG CCATTGTGGTCTCCGTACGGTGACCATTGGAAGGCACTTCATCGCTTCAC CGTGTCGGCACTTCGGTTCCTTGGAATGGGGACTGTCATCTTAGAAGAGA AGATTCAGGAGGAGTTTCGTCACTTCTGCAGCACACTGCGACTTATAGGA GGGAAACCTGTGGACATCAAGAATCTTCTGGAAAATTCTGTGTCTAACAT CATCTGTTCCATGACGTGGGGGAAGAGGTATGAGTATGGAGACCCAAAGT TTGTTCGTTTGCAAGAAATATCTGAACGTATCAATATGTTATTCTATGAA TTCAGCGTCTTGAACTTCTTCCCTGTGCTCCGCTTCTTTCCGGGCTTCAG AAAAGCGCACCAAGAATGGATGAAGTTATCAGAGGAAGTCTTCAACTACA GCAGAGAGTACATTGATCAGCACGGAATTACACCACAAGGCGAAGTCCGA GACATTATTGACGCTTTCAACAAGACTAAACAGGAGAATCCAGGCTTTCT GTCTGACCTGACACTGCCGAGTTTACCCTCTGCTTTGTTTTCCGCGGGAA CAGAGACAACATCCAACACCTTACTCTGGGGCCTTTTGTACCTCATGGCA TATCCTGACGTACAGGAAAAGATACAAGCCGAGTTGGACGAGGTTGTAGG GAGGTATCGTCCTCCGGCCTTCAGCGACAAGACCAACATGCCTTACACTT CAGCCACCATCATGGAGATCATGCGGATCCGCCACATAGGGCCAATCCTT CCACATTGCACCACCGACGACACAACTCTGCTTGGATACGACATTCCTGC AGGCACAACCGTGTTCTTCAACCTGTGGGCCCTCCACATGGACCCGGCCC GCTGGCCTGATCCAGACAAGTTCGATCCGACCAGGTTCCTGGACGAGAGT GGACAACTACTGGCACATGATGCCTTCATGCCGTTTTCTGCAGGTAACAT TGAATCCAATAGCATTACCTTGAGGAAACCATGGATCATCGAAAACGGCT TATAAATCTTACATATGAAAATGCATCTACCTATTTTCGTTTTGTTTAAT CACCCGTTGAAAGACAAAGGGATTATATATTGCGTGGTTACCATTCTATT ATAATAGTTGCGACTCGCTCCTATGGTAGCTTTCCGACCAAATCAGAGGA AGAACCGTGGCTAGAATAGAAATTAGCAAATAGGTAACCACACCAGATCA AACAAATACAGGAACAAAACGATTTTTTTTATTCCCCTCCTGTAGGACAT CGCAGGTGTTTGGGTGAGCACATGGCTAAGATGGAGTTATTCCTCTTCCT CACCAACACGCTACAACAGTTCACTTTCAAGTTGCCTGTGGGTGCAGTGC CTGATCTCCAGGGCATCTGTAATGCCTTTCTTTCTCCCCGCCCGTACGAC CTCGTCGCAATCATTCGGGAGTAGTTAAGTACGACTACAGGCATCCTTCC GTCTAATACACTTGGTCCTCTTAAGTACAGTCTGATTAACGGGTACATGT GCCGGGCAGACCTTCGTAATCAATAGCTTATTGGTAGAAAAATCGCAACT AGCACAAATCTTAATTGAGTTTGAACTATGAGTAATCATTAAACAATATC TAACACGTATGTTAAGAGCATGAACTAATTCGCATGTATTTAAGAAAACT CCTAATCGTTTTTTGATTCGATTAAAATAGATGAAAACGTTGTGAGGAGT AATCAGAAATGTATTTAACCGCAAGTTATCATTTAGCAAGAATACATTAA AGATTACTTTATTTTGTACTTTTGCTGAACAGATTTGTACTGATACTGAG TCAATCCATCACTGGTTCTAACAGCTCTATTGATATCATTTTATGTTATA GGATAAGTATAGCAAACAGGACGTTGTGAAACATCCGTGTGTAGATCATG GTACTGGTGTTACTCAATCCATAATATTATCCTGTTTATTGTTGTGATCA AACATTTGTGGGAGTAAGAATATGTTAGCTCTAACTAACCAAAAATGAAA TAAAACTCTCACATCATCATGTTATGTGCATCGCAAGATCAATACCTTTG TAATAAATGAAAAGTATTGATACTCTATATGTAAGAATATTGCATTTCAG TAGTAGCTAGGACCTTGGTGATTAAAATCATTAAAGGATACATCAAGTTA TTTGTGTATTGTTAGCAAACTGTAAACTATTATAACATTATTCGGCAGAC AGGCACTATTTGACTGGTATTTCTGCTTTGTACATGTAGGGTGGAA

Coding sequence (CDS) from alignment at Sc0000051:1423382..1426027+

>Blg01353.3 ID=Blg01353.3|Name=Blg01353.3|organism=Branchiostoma lanceolatum|type=CDS|length=1185bp|location=Sequence derived from alignment at Sc0000051:1423382..1426027+ (Branchiostoma lanceolatum)
ATGCCACAACCTTGCTGCATGATATACATTTACAAGCAGTCAAAGTACTA
TTCTAATTCAGGGCCATTGTGGTCTCCGTACGGTGACCATTGGAAGGCAC
TTCATCGCTTCACCGTGTCGGCACTTCGGTTCCTTGGAATGGGGACTGTC
ATCTTAGAAGAGAAGATTCAGGAGGAGTTTCGTCACTTCTGCAGCACACT
GCGACTTATAGGAGGGAAACCTGTGGACATCAAGAATCTTCTGGAAAATT
CTGTGTCTAACATCATCTGTTCCATGACGTGGGGGAAGAGGTATGAGTAT
GGAGACCCAAAGTTTGTTCGTTTGCAAGAAATATCTGAACGTATCAATAT
GTTATTCTATGAATTCAGCGTCTTGAACTTCTTCCCTGTGCTCCGCTTCT
TTCCGGGCTTCAGAAAAGCGCACCAAGAATGGATGAAGTTATCAGAGGAA
GTCTTCAACTACAGCAGAGAGTACATTGATCAGCACGGAATTACACCACA
AGGCGAAGTCCGAGACATTATTGACGCTTTCAACAAGACTAAACAGGAGA
ATCCAGGCTTTCTGTCTGACCTGACACTGCCGAGTTTACCCTCTGCTTTG
TTTTCCGCGGGAACAGAGACAACATCCAACACCTTACTCTGGGGCCTTTT
GTACCTCATGGCATATCCTGACGTACAGGAAAAGATACAAGCCGAGTTGG
ACGAGGTTGTAGGGAGGTATCGTCCTCCGGCCTTCAGCGACAAGACCAAC
ATGCCTTACACTTCAGCCACCATCATGGAGATCATGCGGATCCGCCACAT
AGGGCCAATCCTTCCACATTGCACCACCGACGACACAACTCTGCTTGGAT
ACGACATTCCTGCAGGCACAACCGTGTTCTTCAACCTGTGGGCCCTCCAC
ATGGACCCGGCCCGCTGGCCTGATCCAGACAAGTTCGATCCGACCAGGTT
CCTGGACGAGAGTGGACAACTACTGGCACATGATGCCTTCATGCCGTTTT
CTGCAGGACATCGCAGGTGTTTGGGTGAGCACATGGCTAAGATGGAGTTA
TTCCTCTTCCTCACCAACACGCTACAACAGTTCACTTTCAAGTTGCCTGT
GGGTGCAGTGCCTGATCTCCAGGGCATCTGTAATGCCTTTCTTTCTCCCC
GCCCGTACGACCTCGTCGCAATCATTCGGGAGTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01353.3-exon-Sc0000051-1570713199:1423382..1424724Blg01353.3-exon-Sc0000051-1570713199:1423382..1424724Branchiostoma lanceolatumexon
Blg01353.3-exon-Sc0000051-1570713199:1425027..1426027Blg01353.3-exon-Sc0000051-1570713199:1425027..1426027Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01353.3Blg01353.3-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000051genomeSc0000051:1423382..1426027 +
Properties
Property NameValue
GeneIDBlg01353