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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000051:921899..929250+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01352.5 ID=Blg01352.5|Name=Blg01352.5|organism=Branchiostoma lanceolatum|type=mRNA|length=7352bp|location=Sequence derived from alignment at Sc0000051:921899..929250+ (Branchiostoma lanceolatum)
AAATCTGAGTCAAGTGACCTAGTTAACTCTGACCCGCTCATAACAGCGCC
GGTCGCTCATAACTTAATTGGTCTATGCAAATTAGCTTTACTGATTGTAC
TCAATACTCAGAAACCTATTGACACCAAGCCACTCCGTCTGCCCGGTCAT
CACTTTGGTAAATAACCTACATTTTATACTGTTTCTAGGCTAGATTTTGT
GTAGACTTTCATTGATAGATTCATAGAATCGTGGCATCCTGCCCAGAAGC
TGTATCCAGCCTGCTACCGGTCTTACTAGCTGTCAGCCATGTTTATAGAC
CGTCCTGCTAGGGGTAAGAGCCTTTGTGTCCGTGATGCCATGTGTATCTT
TCGCCGACCAGTCTTACATCGTGTCAACACCTGAGGAGCCTTCAATTTTG
TACAGCAGATTGTTTAGTAGAGTGAGAGAACTGTTTCTCTATCTAGAGCG
GTGTATGTTGTTAGAATGTTGGTTATCTGTCACTGCCTATTCACCGAAAA
TCTAGGTCAGTTTATTGTTGCGCCACAGGAGCCTTTGATTTCTTGTAGCG
TATTTTCTCTTACCTCTTTCTCACCTCACTATCATACCGAGATTGTTTAA
GAAACAGAGACAGTTCAATGATCTGTATCTAAAAACGGTGTGGTTAGAAT
GTTTGTTTGTTACTGCCTGTTCACAGAAAATCTAGGTCAGTATTAAACCT
GGAATTTTGTTGCACCACAGGAGACTTTGATTTCATCGTAGCAGATTTTC
CTTATCTTGTCCATCTCACTATCCTATCGAGATTAATATTGTTTGAGAAT
CAGACAGTTGCATCTGTATCTAAAACGGTGTTGTCATAATGTTTCTTACT
GCCTGTTCACCGAAAAGCTAGGTCAGTATTGATTTGGTAAACCTGGAATG
TTGTTGCGGAACCTTTGATTTCGTATATATGATTTCTTACCTTGTCCATT
TCACTATCCTATCGAAATTGTTTGAGAATCAGAGACAGTTGTATCTGTAC
CTAAAACGGTGTTGTTATAATGTTTGTCACTGCCTGTTCACCGAAAAGCT
AGGTCAGTATTAATTTGATAAACCTGGAATGTTGTTGCGGAACCTTTGAT
TTCGTATATATGATTTCTTACCTTGTCCATTTCACTATCTAATCGAGATT
GTTTGAGCTGTATCTAAAACGGAGTTGTTATAATGTTTGTTACTGCCTGT
TCACCGAAAATCTAGGTCAGTATTAATTTGATAAACCTGGAATTTTGTTG
CGCCACCACATTTAAATTTGTGAGTATGGCTCCCGCGGGTGCGCGCCTGA
GCTGGTTTCAGTAGACTGTCAGTGTTTATATTGATGTGGTTGTTGACTAG
TTTGTGGAGAAAGGTGAGGCGGGCGTTCCTCCTCCTTTCAGAGAGAGTTA
TAATGTTTGTGCCCGCCTGCACGGTTCGCAGAATATCTAGGTCATCAATT
AAATCTGTANCACGGTTCGCAGAATATCTAGGTCACTATTTAAACCTGTA
ATTTCATTGCGTGCAGGTAAACAAGAAGAATGGCGGACACTACCGTAGTA
GACGTCAAACTGAGTGATACCCTTTGCCACGGTGCACAGAAACATGGCAT
GACCAGGGAAGAAGTCTTCAGGTATTATGACAACTGGGCCGACAGGTATG
ACAAGGTACGGAACGTCTCTTTTCATCTCGGATATTCACCCCGACCAATC
AAACCACGTGAATCGCATTGAAACTCAGATTCGTATCAGCCGCGATTTAA
CGTTTAGAAAAAAATAGTTTCTACTACTTTTTTCTAAACGTTAAATCGCG
GTCGCTTTCAATCACTTCCAAAGTGCCAAAATTGCCAATCTGAAAACTTC
TTTGGAAAGCTGACACCTTCCACCATCTCACTGGCGAGTTTGTTTAGTCA
GATGTAGTCGTTAACGCAAGTTAGAAAGGGATTTGTCGGGAAATGGCTGA
TACGAATCTGAGTTTCAATGCGATTCACGTGGTTTGATTGGTCGGGGTGA
TATTGCGCTTTCTTTCAATGAGCGCCTTCGTAGATTCGAGTACGCATGTG
CAGTGTCAAAGGTGGAGGCCCCTGAGACGTAAACAAAACCCGTCTGGGAT
TTATTGTAGACTGTCCTTTGTATGATAGCGATAGAATAATTCTTTTCAGT
TAGGTGTTAAGTAAATTCCCCCACTTTAGATACCTGAATAGTAGAGAGAA
ATTTATATTTCTTGCAGCCAACTCTAACTAATCACACATCCTCCTACATT
TATACAATTACCAAGAAGCGAGAGGAAGTCGAAAATACATGAGTATGCTA
GATGTTTATATACAGTAATACTCGTGAATATGTATATATTTGTTAACATG
TGACCTGTGCTTAGCCCAGTGGGGCAAACATGTACAATAAAGGTCTTCAT
TCATTGTTATGAAAATCGAGACAGTGGTCGAGACAGAACTGTTTGCAAGC
CAAGTGGCTTCACTTTTGACACTGCAAATGCGTACTCGAATCTACGAAAG
CGCTTATAGATTGTGGCGGCTTTACCTTAAGACCTGGGAGAATGATTCAG
CTTAATCCTCTTTCGCGACTTTTCCAATCAGCTTTATACCTTCCACACCA
CGTAAACACGACAACAGATCGTTTAATATTTCCATTGAGGAAAAAGACAC
AGCAATACTCCAAAGACAAATACTCAGCCCCTCCCAAAACAGGATAATGA
ATTGATATAAGCTAAAGTGGACTGATTTTAGCCGTAGGAAGAGAAAGGAG
ACACCACAGTTTATTTTGTCTGACTTGTATTGCATTACTGCGTTGTTCAA
GCGTTGTAATACAATGAAAATCATATCTACGCTGTGGCCGCGAATACTTC
GCGACTTACAGTACTAGTAAATCTGCACCTAAACTGACAAGGCAAATGAA
AATTCTACCGTTTTGTCTGTAGGACCTATTTGATCTGAACTACGGCGGTC
CCCGCCAGTGTGCCGAGGCTCTAGCGGAGGTCCTGTCAGGGAACAAGACT
GCAAGGATCCTGGACGTAGCCGCCGGAACGGGCCTGTGTGCAATGGAGGT
AAGGCAACTATCACCTGGAGTCCAGCCATGTTCGCTTTGGTTCACTGTTG
GCGGGGTCGTGACGTTGGGAGCGCGCCAAAGCTGGCGAGGCTGGACTCCA
GGCTAATGCTTTGATCCCAATTGCGCCGGTGCCCATAGTAGTGTAGTCCT
GGCCAGGCCCCGAAGCCAGAAATTTGTCTCGGTGGACTGCCGTGTACCGG
GGAGGGGGGTGGTACCTTCTAGTGTTCGCACGATTAGCTCACGGCGTCTA
TTTGTAACAGGGTCCCGCTTTGAATTTAAGTCCGGATTAAAGTCACCGCG
GGGCCCGGCCGGGCCCAAAGCCGCAGGGTGTCCCACGGGGCCACGTAGGG
GTCACGCTCGAAAGTGAAAAAAAAACTGCCCGTGAACTACCCGGCAGGGC
TCCCTTTTCCAATTGTGACCGAAGCACATCAAAGGCAACCATGCTCGGTC
TATTGACCTAGTTATCGTCACAAGGTCGCAAAACACAGTGTTCATCCGCG
ACCGCGGGGTCGGTGGTAAAAAAATTAGTGCGACAAAAATCGTGAACGCT
TCTAGAATTCTTTACGTGAAAGCCGATTAACAAGACAGGAACTGTCCTAT
AAGGTAGACGTATAAGCATGCCTTTAGATCGCATGAATACGGTAATGATT
GTTAACGTTAGGACCCTGTCACACTTGTGCGTATATGCAAGTCCGCATGA
GTTGCGTATTAGCAAGTTTTTGTTGTAGGTTAAGTTTGCAGCCGAAGAAG
TCATTTCTTTGGTCCGATAAGTAGACTGCACAACGATGGGCAAAGTAGAA
AACAACTTCTTCCCTGCAAACTTTACATAAACCAAAAAAAAATGTTCATG
CGCAACTCATACGCACTTGAAAATGCGCACAAGTGTGACAGGGCCTTTAA
GCTTGCTCAGTCTGCGTAGAAAACACTGGATATCGCAACATCCAGTTTCA
TAAGTTGATTTTTTAATCCCTCCTGAAGCTGATCAAGTTGGGCTACACCA
ACCTGGATGCGATCGACGGCAGCCAGGGCATGTTAGACATCGCCAAGTCC
AGGAACCTGTACCACAGGTACATCTGTGACTTCCTGGGACCACGGCGCCT
CGACATAGAGGACGGTAAGTGTGAGGGTGACGATTCCTGTAGCTATGTTT
TAGAAATGAGTCCTTATAAACTGGCCAATAGTTTCAACAGGTCGGTAAAT
CAGTGTATAGCAAAGTTTTTGGTACACAACCAGAGAGATGATAAGGCCAA
GCCGACGTTCTAGTGACCGTCTGTCACCCTTCACAGGACAAACCTGACTT
GTTCTACCTCGCGCTGCAGCTAGGTGTCGCTGCTGCAGTGTCAACAGTGC
GGTCCCCTACGTGACTGACTTTATATCTCCCTCATCACGTGTCATGACTG
GAGCAGATTTGTTTTATCCATGCCGCCTCCATAATCCGACAAGTGCCTCA
CCTTGGCCCCGTCCCGGTCTCTTACACAGTTGTTTCTTGTACAGTAGGCG
CCACTTAATTGCACCTCGGATAAACGCACATTCCATTTAACTGCACCGAA
TCCCAAAATCCAAAACCGGTTCCCATTCACTGCATTGTTAGTGACTCCGC
ATATCTGCACGGTGCATTGTCACCAATGCCGGATAACTGCACTAATTTGT
TTCAAAAATCCTTATGGTTAACTAAAAAGGTGCGCTAAAAATCAGAAAAC
GCGGTACAAATGAGCCTATACGTCCCTATATAGAGTCACAATACCGCCAA
TATGTCTAAAATTGTTTTCACTAACAAAACAAGGTGGTCTCCATTGACAA
TCACGTTGATAGCGATCGTATGGGATGTCCTGGGTGGGTCACGGGACGTG
GCGTCACCATCAAGAGACACACGCCTGCCAAAGGCGGCATTGCGCTTTGG
CAGACAGCATGCTGTACTCAAAAAAGATTTGATCTCTACCTCTACACTAG
CTGTCTTATAACTGTGAATGCATTTAAGTTCGCGGGGATTTGATTTCGCG
TTAAAGATGACATGGGTGTTGTCGGTGGTTTGGGGTTCGCGGCAGCGCTA
TATTCACATACTGCTGCAATAATGAGACCGGCGTCTTAACGTACATCTAG
TCGCAGTTCTCAGGTCTAATCGGAAACCGCACAGCGACTCGAGAAGGGCT
ACAGACGCGTGGACGGACATAGCAGTCGCTTTTGACGGTGCGGTGCTGAC
GTCATCATCTGTCAAATTCTTTTATGGCACAGCTGAATCTGCGTCCTAGA
AGCTTCCTACATTCACCCGAAGGATGTATGCGTGGGTTCAGCTCTGCTAT
AAGGAGAATGGTCTGTCACTGATCGAAGTCATCTAACCATATCTACCCAC
TGGATACGTAGTACAGTCCATTGTACAGTTATTCACTACAATGATGTACA
CAGTCTAATCTGTCCAAACATGACAGGGGCCTCTCTGGCGCTTACTGATT
TCACTCACTGTGTCCTGAGATGTCTTTCCTGAGAATTTGACATTTACTGT
TTTAATACATAAACGTGGCCCTAACAAGAGGTGGAATCTACGGTGTTACT
GCACTGTACCTGTATAACGAAAGCTTTCTAACATCTAAATGCGTACTGAC
AAGTCCATACAGCACACCGAGGTTTATAAACTATTCACCTCTTGTATGAT
ACAGTGTACTATCGGTCCAGCGGGGCAATTTCGCATAATTGCACCAGCCG
GATAATTGCACCAAATACGCTTGCAAATGGGGTGTGCAGTTAAGCAGATT
CTACTGTAATATAATATGGTCCTGTCACTGCTGATGTATCGCCAATTAAG
AAATCTAATAATCGTATAATAGTGTCCAACAACTGTTAATGCGTACAATG
CAGCGTTGCCATATATTGTACATTCTCAGCGCAGCTATATTTGTCTGTAT
ACGTGTAGTGTTGGAAGTGTCGTATGGATCAGGTGGTGAAGTTTGCCATC
TTTGATTGCCTTGTAGACGTTGCCATGTGTGTGTTTGTGGTCATAAACTT
GCACTAAAACGGATACCACAAAGACATAACAGGATGACCTGAAAGGCACT
TATCTAGAGCACGTGTACTGAGACAACGAAACTGTCTACGTTTCAGACCA
CTATGACGCCATCGCTTGCTGCGGTTCGTTCAGCCAAGGTCACTTGAAGG
ACGACTGTCTTCCGGAGCTCATCCGTATCGTTAAGCCAGGTAAGGTGAAA
GCTTCTTGTTCTGTGACGAGGCTAAAGAAGACTGAAATAAATCGACTACT
TAGACATGTATTTTCAATCGCGGGGGCAGACTTGTTGTGAGCCTCAAGTA
GTAAAATCCTTTGCTCAAACCCGATTATTTTTTTACACAATTAACAGATT
TGTTGTTACATTGTGGCCTTTTCGCAGAAGATCCTCCAAGGCTAGTAATC
TTCCTTTTCCGTCCTGAGAATTTAAGTATCATTGAATAACCATCACGGTT
GGGACCGCATCCTTCTCGGAGCGGGGCCACCTAGTAATTTGAGTCAGTAT
TACTGCTCCTACAAGTTAGCAGACGGACTACCAAGTCATCTGTGTAAAGA
AAGAACTATAAGGTAACATTAATGATAATAACTTTATTGCAAGTTCATGC
CCGAAGGCTAATTGCAGACAAACAAGTATATAAATATACATGGGAATCGA
CATAGTTATCTAGTCTACTGTGAAAGTTCTATGTTAACTAAGGTTGACTT
TGGTTGGGTTTGACTTCTTTTTTGAAGGCAGTGGAAAATGAAGAGACCCA
CGTTTTGTATCGTATTAAAGTGGGTTGGTTGATTTTGGTAGTAAGATTGA
TTTTGGTAAGTTAGTCAAATGGTGAAAGCTAGGGATTAATGGACGTGTGC
GTGTGTTTCAGGTGGTCTCATCTGCATCGCAATGAGGGAGGAGTTTCTGT
ACACCGTGGAGGCGTACAAGGATAAACTAGAGCCCGCCATGATAGCCTTG
GAGGACAAAGGATCCTGGGAACAAGTGGCACGTGACATCGTTCCCGAGTA
CTACCGCCAGCTGGACGGAATCATATTCATCTATAGGGTACTTGCCTAAA
CACTAAGGATATGGCCGATTGAATGTGCATTCCGAGTATTACGAAACTGG
GTGATATTAAGGGGGACGGAATCCTGTTAAGAATNGGGTGATATTCAGGG
GGAGGGAATCCTGTTAAGAACAGAAATAAAAACGATGTGACCCTTTCACC
AGATCGGCATATAGTCATTAAAGGCATCCAGGGCATTTTATGAGGCTTGA
AACTTCAATAAAAAGGTCTAATTTCTAGTCATTCCTACACAAAGTAAGGT
TT Coding sequence (CDS) from alignment at Sc0000051:921899..929250+ >Blg01352.5 ID=Blg01352.5|Name=Blg01352.5|organism=Branchiostoma lanceolatum|type=CDS|length=669bp|location=Sequence derived from alignment at Sc0000051:921899..929250+ (Branchiostoma lanceolatum)
ATGGCGGACACTACCGTAGTAGACGTCAAACTGAGTGATACCCTTTGCCA
CGGTGCACAGAAACATGGCATGACCAGGGAAGAAGTCTTCAGGTATTATG
ACAACTGGGCCGACAGGTATGACAAGGACCTATTTGATCTGAACTACGGC
GGTCCCCGCCAGTGTGCCGAGGCTCTAGCGGAGGTCCTGTCAGGGAACAA
GACTGCAAGGATCCTGGACGTAGCCGCCGGAACGGGCCTGTGTGCAATGG
AGCTGATCAAGTTGGGCTACACCAACCTGGATGCGATCGACGGCAGCCAG
GGCATGTTAGACATCGCCAAGTCCAGGAACCTGTACCACAGGTACATCTG
TGACTTCCTGGGACCACGGCGCCTCGACATAGAGGACGACCACTATGACG
CCATCGCTTGCTGCGGTTCGTTCAGCCAAGGTCACTTGAAGGACGACTGT
CTTCCGGAGCTCATCCGTATCGTTAAGCCAGGTGGTCTCATCTGCATCGC
AATGAGGGAGGAGTTTCTGTACACCGTGGAGGCGTACAAGGATAAACTAG
AGCCCGCCATGATAGCCTTGGAGGACAAAGGATCCTGGGAACAAGTGGCA
CGTGACATCGTTCCCGAGTACTACCGCCAGCTGGACGGAATCATATTCAT
CTATAGGGTACTTGCCTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01352.5-exon-Sc0000051-1570713199:921899..922055 | Blg01352.5-exon-Sc0000051-1570713199:921899..922055 | Branchiostoma lanceolatum | exon |
| Blg01352.5-exon-Sc0000051-1570713199:923415..923553 | Blg01352.5-exon-Sc0000051-1570713199:923415..923553 | Branchiostoma lanceolatum | exon |
| Blg01352.5-exon-Sc0000051-1570713199:924821..924946 | Blg01352.5-exon-Sc0000051-1570713199:924821..924946 | Branchiostoma lanceolatum | exon |
| Blg01352.5-exon-Sc0000051-1570713199:925927..926062 | Blg01352.5-exon-Sc0000051-1570713199:925927..926062 | Branchiostoma lanceolatum | exon |
| Blg01352.5-exon-Sc0000051-1570713199:928045..928137 | Blg01352.5-exon-Sc0000051-1570713199:928045..928137 | Branchiostoma lanceolatum | exon |
| Blg01352.5-exon-Sc0000051-1570713199:928810..929048 | Blg01352.5-exon-Sc0000051-1570713199:928810..929048 | Branchiostoma lanceolatum | exon |
| Blg01352.5-exon-Sc0000051-1570713199:929080..929250 | Blg01352.5-exon-Sc0000051-1570713199:929080..929250 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000051 | genome | Sc0000051:921899..929250 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01352 |
|
