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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000051:1478594..1483537+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01336.1 ID=Blg01336.1|Name=Blg01336.1|organism=Branchiostoma lanceolatum|type=mRNA|length=4944bp|location=Sequence derived from alignment at Sc0000051:1478594..1483537+ (Branchiostoma lanceolatum)
ATGAGGCCGACAAAGACACTCTCGCCAGTCCACCCCCGTCTTGACGACTG
TGAGTGCACCCCAAGTGTTAAGCACCTCTTCCTACGCCACCACATCCTTC
AGACTCCCATGTTCTTCATAAGGTGGATATACGCAGCCCTGTATTCTCTC
TACCTTCTGTTCGTCTTACGAGCTCCAACCGACCGGGACATTGTTGACTT
CATAGAGAACACGACAATGGCTATGCTGATTCGCCCTGCAGCAGACGACA
AACCGGGCGAATATAAAGTGACGGTGAACGATTGCAAGCTGCGTGCCTCT
GGAGGATACAAGCTGAAGAACATGTCACTGGGGTATAACAAAGGACAAAG
CGGCGCCTATATTTTGTACTTCACTCGCAACGGAGTTGAAGTGAGCAATA
GATCTCAGATCTTTTCAACCATTTACTTCTACCATATTTTCTCCATGCAC
CCCAAGTCCCACTTGTTCTCCAATAGCCTGGTCCGACACATCGTGGATAA
CGATATAAAGGCTCTCAAAGAGTCGAGCTACACTTCCATTCCGTTACATA
AGGAGCTCCTCCATCCGTCGCTGAATCCGTTCGGAGGAAACGTACCCAAG
TATATCGGCTATGGACTTCCCTGCATCAGAGAGAGCCTTGTGGAGGAGAG
CAGGAATATGAGTGTACTGGAAGGGCACCAAGTCGCACATCGCTCGAATT
TACATGGGAAGGACTCTTTTGTCGGCAAACTCTTCAGGTTGGTGGAAAGT
TGTAGATGGTTGTGAAGTTAATGTTAGATTTTTTTAGTGTTAAACAGTTG
AGTTCCATTTAGAAGTAGCACTGGCATGTTAGTTTTTGAGAGAGCAGGCA
GAAGTATATGTTCAATTCCTCACTGTATTTCAAAGGTTTATCAATATATT
GTGTTACATAATATAACGTTATGGGTCGTCGTCTTCAGAACCTTGGTTAC
TTTTCATTTCGATATTACCTGACTTCTAAATTTTGTTCAACCCTCTCCCT
GCTGTCTCATCACATGATATAAATAAGGTGCCTAATTGCTTTCTAACCAG
GCCGACAGTTAACCCGAGCTATCTAGACTGGGGGGGGGGGGGGCTAAAAG
TGCCCGCGCCAACTTTGACATCGTANNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNGGGGGGGGGGGGGGTGCCCGCACCAACTTTGACATCGTA
TAACTGCCAAACGACGTATGTTAGGACTACCAAACCTGGTGACTTTTCCT
AAAATTTCGTTGGCAACAATATAATGGTAATAGTGTAAAGTTTATTATTT
TTCGTGTTGCCATGGCAAGGGGTTTCTTAATAGGAATTTTATACAATATT
CACTAATTTCGGTTTGACCAATGATTTTTCTCATGATTTCTTGCTCCACC
ACACTTGTTTCCTACATGTATAACATTTTATGTAATTTGATGTAACTTTA
ATGATTTAATATTCATAAATTATGCTAATTTAATGATGTCATCGGTCAAA
ATCCAAGATGGCAGACTATATCATTAGTGTAGGTACTGACAGGCTTTTTC
GCCTTCAAATTCGTCACTATCTGGTATTTTATTAAACAGAAACATACAGA
TAACGTTTCTAGTCTATTTCCATTGTGTATTGGGGTCATAAGTTGAAGAA
TATATTTTCAAAAATTTAAAATAGCCGATCCAAGATGGCGGATCCCAAGG
GATCGCTTACAACACATGGCGAGATTCTATGGCGTCATTTTGACGTCAAC
CTAGTAACTATTGATGTCAGATGTCTTGGCATACCTTAACATCAAAAAGA
CACACTATTTTATTTAATACCCTTAGATATTACGTGTACATCACTCCCTG
AAAATTTGATGATGATATACCATACCGTTTGTAAAAAAAGCCCAGTCTAA
ATAGGGTTCACACAAGATGCTCACATGGTCGTTAAGATTTAGATTTGTTG
TATACTTTTTAAAGTGCTAGATAGTAATGGCCACTTTTCCCCCATCTGAC
AGGTCAAGACTGGCGCTTCAGGGCGTCATGAAGCGCCACGAGATCGACCC
GAAGTTGCTGGACGCTCTGTTTAACCACACCATTGTGCACAGTGTGGACC
ATGTTAGCAACAGTGAGCGGTCGTTCCTAAGGCGTTGGATTGCAATTTAT
TATCGTGTTAACTCGTTTCCAGTCCCGCACAATTTATGGCTATTATTTTT
CAACATTGAATGACGCTTAAATGACTCAAATTATACGGTCGACTTTGTTC
CAATGCGGAACGATGTTTCAATCAACAGTTTATGTTGAAGACGGCCGTAC
GATATAACGCTGGAAAGATTACTTTATTTTTCAGTAGCTATGAATGCAAA
TGTCGCTGAACACATGTAGCTAAATAAATAACATGCAGTTTCAGACAGTT
TTCATTGAATATGATATTTTACTGGCGAGAGTTTCGATCTCAGATATTCC
TGAGTCCGAGCCTGAGGTGTTGCTAAAAACGACTTCCCTACGGAATGCTT
GCGTGCAATTTTTAGAATATTTGGCAACTTAATCGCATCCATGCTGTGAC
TGTGGGTACCAATCTGAAACCATCTTACATTTGATATTTAATTGTCCAAA
ATATATTCCACACAGAACAAACTTTCTTGACAAGCTAACAAATCTAATGT
CCCAAATATATTCAACACAGAACGAACTTTCTTGACAAACTAACAAAATT
AAGTTGGACTTAAATACCATCTCTGACAGTACCAAACTTGCCCTTGTTCT
TAGAGGATCATCCTCAATAACTGCTGACTGTAATCTAAATATTATGCTAC
TTAAACAAACATACATTCAACAGACCCAACGCTTCTAGCTCTATTGGGCG
GAGAATTTCCGTGCAGAAGATATAGAAGTGAGCTATCTAATTTACATCTA
AATTGAATTAATATGTTCTTAGGTGTGGGTGCACGTGGGGGGGGGGGGGC
GTAGGCACAATTGAGGTTTTGTTCTATTGTTGTATTCATATATATATATA
TATATTCATATCTATAAGTCTAAATCTTTTGAGCTGGCAAAATAAGTTGA
ATAAATTTAACGCAGCGCCACTTTGTCTTTGTCTCTGTTATTTCTGAATA
ATAATTCTAAAAAATAATCGCAGTACCACGGCCCTGAGGTATCGCAAAAA
CTATTTGCAAATTTTCTCTGGGACGATCCCATTACAATCACATCAGAAGC
TTATCATGGCTCCTTACACCTTTCTTTCAGGTTTTCTCTTCATCCGTGGG
ACAAAGAATGCAGCCTCTATAAGGCCTTCAACACCAGTGTGGTCCGTTTA
CTGCTCGCCCAGCCCAACCTGAACCCGCTGGCACCAAACACCATCCGCTC
TATCAACAAGCCGCTCTACCAGGACCTGTACAAGGAACTGAAGAAGATCG
ACCCCGCGTGGGCGGATGTAGTGACTGCTAGTGTCATGTACTAGATGGTA
CATATAGGTCCGTCAAAGCCGTGTTACAAATTTGTGTTTGGTAACGTTGT
AGGTCTACTCTTAACCTGTCCTACTACAATCTGTACCGCTAACTGCAGAA
GATTAACGAGGGGACGTCATGCAATATATCGATATCTGTATATCTGTTTA
TCTCTATATTTCTATATATCTCTATATTTCTATATATCTCTATATCTGTA
CATCTATATATCTATATACCTATATATCTATATATCTATATATCTAAATA
TCTAAATATCTATCTATATATATCCATCTATCTATCTATCTATCTATCTA
TCTCGCTCTCTCTCTGTCTCTCTCTCTCTATATATATATATATACATACA
CATACATATTTATGGAAGGAAGGAAGGGATGAAACAACGAAAATTCCACG
ATTTTTCCTACATCCTTTGTTGGATGTCTCATTCCATGTCTTAACGAGGT
TTAGGGCAGTGGGTTGCGTATGACAATATATGAAAGCAAGTAAACAACGC
AAACCAGGGAGTGAAGTCTTTAAGTGTTATTTTCAATATGTTACGAATTG
CTAACATGTGACATCAATCTATCATGATGTACTATTAGTTATGTATACTC
TCTATACATGTTACTAATGTTAAATAAATGAACAACAGAGAAATTTTGAG
GATTCCCATCTGACGCTAGCTAAATAAGGAAATCGAAGACAATCCGTATT
CAATGCAACGGACAAGACTGTGAACGTTTTATAAAGTGATAGTTTTCCTA
TAAACCTGATGAGAACAGAAACGCAGTGATTTTGTCTCTACTCCTCTACT
CCACACCACTCCTGTTGTCTCAACTTCATGCATCTGCACTCATTTTCACT
CTATAAATGATTCGATTTGGTTAAGACAGAATTGCTGAAAACAACTGGTA
AGACCTGTTTATGCCTGACTACAAGGCATCTCTGCAGTTCATATGATGAC
TGCAAGATGTCATTTGTGAGCCATGAGTGACAGACTAGCAGTCAAGTGCC
ATATGTAAAATCCACGCTAGATGTCCCCATTGATACGTAAAGAAGTGATA
TAGGGTAAAAATGCCGGTGTGCTCTTTGATCAGCGACATTAAAATTAAAG
CAGCTGATTTAGCATTCACAGTACAAATAACCACCATTTGTAGTCTTCTT
ACACAAGATAGACACGTAAATTTAAAGGTATAACGTAAAACACCAAGGCA
GAATATTTTTTGTTAATCCTTTTTTTTGTCAAAGCTAGTCTGGGAGACAA
CTTTTCTTAAATCTTGTACCTTAGATACTTCGCTGTGTCATCTTAGATAG
TCAGTAAACATACTCAAGATCTATGACCTATAGCTGCATTGGTGTGTGTT
TATTCAAACCTATCTAGAATTGGCTTTTGGGGGTGGGTTATATTCAATAT
ATGACAACTCTACATATGGGAAACAACCATGACTACATATATCCCCATTC
ACAAAGTAGATCTTACGAATAAATATGTTCTGACGACCTTGTTT Coding sequence (CDS) from alignment at Sc0000051:1478594..1483537+ >Blg01336.1 ID=Blg01336.1|Name=Blg01336.1|organism=Branchiostoma lanceolatum|type=CDS|length=1080bp|location=Sequence derived from alignment at Sc0000051:1478594..1483537+ (Branchiostoma lanceolatum)
ATGAGGCCGACAAAGACACTCTCGCCAGTCCACCCCCGTCTTGACGACTG
TGAGTGCACCCCAAGTGTTAAGCACCTCTTCCTACGCCACCACATCCTTC
AGACTCCCATGTTCTTCATAAGGTGGATATACGCAGCCCTGTATTCTCTC
TACCTTCTGTTCGTCTTACGAGCTCCAACCGACCGGGACATTGTTGACTT
CATAGAGAACACGACAATGGCTATGCTGATTCGCCCTGCAGCAGACGACA
AACCGGGCGAATATAAAGTGACGGTGAACGATTGCAAGCTGCGTGCCTCT
GGAGGATACAAGCTGAAGAACATGTCACTGGGGTATAACAAAGGACAAAG
CGGCGCCTATATTTTGTACTTCACTCGCAACGGAGTTGAAGTGAGCAATA
GATCTCAGATCTTTTCAACCATTTACTTCTACCATATTTTCTCCATGCAC
CCCAAGTCCCACTTGTTCTCCAATAGCCTGGTCCGACACATCGTGGATAA
CGATATAAAGGCTCTCAAAGAGTCGAGCTACACTTCCATTCCGTTACATA
AGGAGCTCCTCCATCCGTCGCTGAATCCGTTCGGAGGAAACGTACCCAAG
TATATCGGCTATGGACTTCCCTGCATCAGAGAGAGCCTTGTGGAGGAGAG
CAGGAATATGAGTGTACTGGAAGGGCACCAAGTCGCACATCGCTCGAATT
TACATGGGAAGGACTCTTTTGTCGGCAAACTCTTCAGGTCAAGACTGGCG
CTTCAGGGCGTCATGAAGCGCCACGAGATCGACCCGAAGTTGCTGGACGC
TCTGTTTAACCACACCATTGTGCACAGTGTGGACCATGTTAGCAACAGTG
AGCGGTCGTTCCTAAGGTTTTCTCTTCATCCGTGGGACAAAGAATGCAGC
CTCTATAAGGCCTTCAACACCAGTGTGGTCCGTTTACTGCTCGCCCAGCC
CAACCTGAACCCGCTGGCACCAAACACCATCCGCTCTATCAACAAGCCGC
TCTACCAGGACCTGTACAAGGAACTGAAGAAGATCGACCCCGCGTGGGCG
GATGTAGTGACTGCTAGTGTCATGTACTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01336.1-exon-Sc0000051-1570713199:1478594..1479330 | Blg01336.1-exon-Sc0000051-1570713199:1478594..1479330 | Branchiostoma lanceolatum | exon |
| Blg01336.1-exon-Sc0000051-1570713199:1480596..1480724 | Blg01336.1-exon-Sc0000051-1570713199:1480596..1480724 | Branchiostoma lanceolatum | exon |
| Blg01336.1-exon-Sc0000051-1570713199:1481824..1483537 | Blg01336.1-exon-Sc0000051-1570713199:1481824..1483537 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000051 | genome | Sc0000051:1478594..1483537 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01336 |
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