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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000179:238766..244895- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01163.1 ID=Blg01163.1|Name=Blg01163.1|organism=Branchiostoma lanceolatum|type=mRNA|length=6130bp|location=Sequence derived from alignment at Sc0000179:238766..244895- (Branchiostoma lanceolatum)
CACAACTTGAGAACCTCTGGACGAATTGCGATTATACTTTGTATGTGAGT
AGGTCTTGGGAAGACAAAGGTCAATGTCGAATATAAGCCTCCTGGTGGCT
GACTTTGTTACTGCAGCAGAAAGTCCATTTGTTGTACCTTTCGTCCTGGA
CATGCTATGGTCTTGTTGTTTTAGTGGAAAAATGATACCGCACTGTCCGC
ACACCAACATTTTAACGTTTGTTTTTATATTATTTGTTTCGCTAGAACAC
ACGATCCACAGGCGTTTGACTCAGGCAACGTCATCATTTTGGAGGGGTTC
CCAAAGGCGTCCGTATCACCAGACCGAATCACCCTCGCTTTCTTTGTCTC
CAACCCGAATTCCTCCGCCGCGCCAGTCCCGGGTAGCCTCCTCCTGATGA
TGATGCAGAATGATCAGATGAAGGTGGAGGAGGCACTAGGATGGAAGACG
ATCTACAGTATTTATGCTTATGGTGATGGAGCTCCTACAAGTGAGTATGT
TTTTATGTTCAGTTTTTCAACATTAGGTACATGGACATTGCATGGTGATG
CACTCAGGTGTACAGAACTTATTTTGACACCACCTAACATAAACATAGAT
TTCAAAAGCATGCTATTATATCAGCACTACTAAGTGTAGACCAAATGCAA
GAAACACAAGGTGCTAACATCGGTAAAAATGTACAGAAAATGTGAAGTTT
TAAAAACGTTCTGATGAGGTGATGTAGTTTTGAGAAATAGCCAAAATATT
AGAATTAACATCCAATGGATATAGGAGGCTGTCTCTGCTAAGTGAGTATG
TTTGCAAACCTACAACTTCAGTGGCAAGTAAGTTACATTTAGTACCTGAA
AGTTGCCAAATTGAACAATTGACATTGGCTTGACTGCATACGGTCCATCA
GACTACAGCATTGACATATTTCTATGTGTGTTTTCGAAGTTCCAAACAAT
GGGACAAGGTAAAGGTGTGTGAGAATGTTCAAAAACAGTCTGGTTGGGAA
ATTGATTCTATAATCAGACCAATTCGCGCAAGCCGGTCATTATGANTCGC
GCAAGCCGTTCATTATGATCATGGCTGACTACTTGTGAAGTCTTTTTAGC
AGGAAGAACGGAGGACAGCTCTTGGTATAGAAAACAAATTTAAAATATAC
GGTGTAGGTTATTTTACTCAAACTTCATCATCTCAAACTTTCTCATCGCC
AGCAGTGGTGTCGACAAATGTGACGGAAGAGTTAGACGGACAAACTGACT
ACCCAGTTACCGAAAGCTCATCCCGTGTGTTGTACATCGTGATCGGGGTG
GTCGTCGCAGTGGTTGCGATAACACTGCTCATCGTGCTGATAGTAAGGTA
CATCATTATCTCCATGAAAAAATGGAGATATTGTTTTGGCGTGTTTGTGT
GTGTGTCTCTGTGTTTGTGTTTCTGGACTATTCTAGTCAGCATAACTCAA
GAACCTCTGGATGGATTACGATGATATTTGGTATGTAGGCGGGTGTTGTG
AAGCCGAAATTCAAGGTCGATTTTGGGCCCCCTGGTATGTGAGCTTGGTA
CTGCAGCAGAGCTTCCATTTTTGTATCTTTTGACCTGGAGGTGCTATGGT
CTTGATTTTTTTGGTGGCAGATAGCTTGTGATGTAATAAAGAAGTGGTGT
AGGTTTGCCCCCCCCCCCCCAGCAGCTTGCTCTGGAACTGCAGTGGCGTT
ATTGTGAAAATCTTCTAAGGAGAATAACTGAACGAAGGGACGACAGATTT
CCATGATATTGAGTATGCAGGTAGCTTAGACAGAGATGTACACAATGATG
TGCAAATTATGCTAATCAACACTTAATTTGCATAACTAATGAGGAAAATC
TATATTTGCAGTGTTTTCCATTATAAGACTCAAATACATGTACATATGTA
GTTTATGGCAAGTGGAGCACCATCAGATACCAATTATGCAAATACATTCC
TAATTTGCATAATTAATGCAAAAGTGCCAGAATTCATCCAAGTGGAAAAT
GATAGGACTGACAATATCGCATCATGTCTAAGTTAGATAAAGGTGTTTAT
GACCAAGCATATATTATGTAAATGTGTAAGTCATTTGCATAAACAGAATA
GTTCATGGAGATATGAGGTCGCGGTACGGTTTATCGTGCGTTTAGACCGT
AGATACTGGACATGCTGACTGGAGAGATCTCGTAATGATCTATTTAACAT
AAAGAATTGATACTGTTACGGCTAATACCTTTTGAGTATGCTATTCATAT
CATTTAGCACAATTNAAGAATTGAAACTGTTACGGCTAATACCTTTTGAG
TATGCTATTCATATCATTTAACACAATTGAAATATAAATCTTCCTTATTG
ATTGTACAAATTGTGCATCCATTTCGTTGGTCTTCATTAAGGTCACTTAC
AGGTCAAAAATTATGAGAATTCATTCGTCTCTTCTTGACTTATTCTGTGT
CATGGACCTTTGCCAACGCATCAGCTAAATAAAACACTTTATCCTTCCTG
GTAGAAACGCAAAGATCATGTGAAGGTAAACATTCTGCATTTGCTCGCAA
ATGTTGCCCCTCTAGTATTGTCTTCGAAATATTGAATAGTCATCGGGCGC
CATGGGCGTGGATCAGTCTTGTTTTATCGAGCTCTTACCAGTCAATAACT
CCTTCCTCCCTCCTTCTTCGTTTATCTCTCTCTTCTATTCGGTGCGTGAG
ATGTATCATGTACCGACTAAATAACAGGAATTCTGATGTACAAATATTTC
CGGTTGCCATTGTACAAGCAGGGGAATGAAGAAACCAAACATGACCAAGC
CGAGCTATGAAGTCCACAGGAACATCAGCCCAGACCCACCGATGGCTGGT
CACGTGAACAGGGCTCTGAAAACCACGGATGAGCACATGGCGTGGCCCAT
GGACCATGAGACCCGTGAAGGACAGATCCCGATGACAAGGATTGACATCG
ACAGTCTCATCAGCCCAATGCGTTGATGGCCTGCATATACTGTTACCTGA
AAGTGTAACTTGAAAGATAGAAAATTGTCATTTCCAGGAGGGTATACGTA
AGTTACAAAGGGGGATAAGGTGCCACAATCACTTATATTACCCGTAGTAG
CTTTGTTTGTTCGTTTGTTTTGGTTTATTACTATACCCAGTAAACCGTTT
GATAGCGTAACACACCAGGTTTGTACTGAACAGTATAAGCTGCATATCCG
GACAGATTTATTGTATCCACTCACACCGAGAATTCGAAGAACCCTAGTGT
CAGCAGTGTTAGAAAAGAATGATGAGGACTTTTCATATTATTGGAAGAGA
AGCTGTAATTTTTATTATTCTGCATTTGTACATGAAAAGAAACAAATCAT
TTAGTAACAGCAAGGAAAAAGAACAAAGAGGGGAGACCAGAAACCTATAA
AGTTTTCGTGGGTCTTCTAAACTAAGATTATACGAATGATCATAACAATA
ACAGGTATATGTTATATAAGTAACCATTTGGCTCGTCCCTGAGATGTCGC
CAAAAAGAAAATCGTTATAAATATACTAGAACATTACAAAAATGAAAGGA
CTAGCTTACTAATAGAATGATACAATCGAATGGTACATAAAATTTAACAG
AAGTAAATTTAAAGAAAATCAAATGCATGTTATTAATCTAAAACACCTCT
CACTCGATAGAACCATTCCCTTTCCCAGAGCCACCAAAAAAGGAGCTCTG
GATTCTTTTATCACTATGACAATACATCCTTTAAGCCGGCGTCACAATTC
ATGCGAGCATCGGCCGNCAGTATCATTTATCATCTTATGTTATAAACCAA
ACTGTCGTTTCCTTTTATCTATAAACAAGAAGGAGTTCGGCCGAGGCCCG
TCCAAGCTCCCATCAACACCTGCACAACGCTCGCCCGAAGCACGCCTTAC
TTTTCATGAGTCGGCCGGAACACTGACGACGGTCGTCCGATTATTGTACA
AGGCCCGTGCGAGGCTCGCACGAGGCCGAAGAGTTCGGGCGACCTCCGAC
CGACCAAAAATCGGGTCTAAAATCCTCGGATGCCCGGCCGAANATCTCAA
ATTTGGACCAACTTTACTTTCTGAGTTGTGGCAAATCTGTAGGGCACAAG
TGAAGTAGGTGGGCACACTGAAAATAATCACATAAAGAGGAATTTTGTTA
TAGACCAATCAAAATACAAGTGCAGGAGCCACAAAGTCAACAGATCAGTC
GTTTAACCCCGATCCAAAAATTTTCACCAAATAGAAATCGACCGAAGCTC
GGGCGAACGCCGTCCGAGCTTCGACCGACCGTTGACAAGCCTATCGACGC
CCTGCCGACGCCTGGGCGTGCCTCGGCAGACAAACATAGATCTATAATGA
CTCAGTGGACTTTCAACTAGTCATTTTGTGGAGGAAAAACTCAGGAAGTG
AAGTCAAACCTCAAAAGTCAAGCCCCAGTTCATTAATATACAAATTGAAA
CATCCAAACCAATACCAAAATAGAAACAAGAAGCATTGTCTTCGGTGTCA
ACATTTTATTTATAATATTTTTTTGAATGAAAATTTAACTTTGCATTGAA
TTGTCTTTCATTAGAAAAGTTTGGCAGCATTCTTCGACAAGTTGAAATTA
GTATTAGTTAATATTACAGTATCATTTATCATCTTATGTTATAAACCAAA
CTGTCGTTTCCTTTTATCTATAAACAAGAAGGAGTTCGGCCGAGGCCCGT
CCAAGCTCCCATCAACACCTGCACAACGCTCGCCCGAAGCACGCCTTACT
TTTCATGAGTCGGCCGGAACACTGACGACGGTCGTCCGATTATTGTACAA
AGCCCGTGCGAGGCTCGCACGAGGCCGAAGAGTTCGGGCGACCTCCGACC
GACCAAAAATCGGGTCTAAAATCCTCGGATGCCCGGCCGAATATTGGCCG
AGCGCTGGGCGTTGCTCGGGCGAGCTACGGGCAAACTGTTGACGAGCTGT
GCGAGTTCAAAAATCGTCGCCGAGGCCTCGCTGAATTTAAGCGCAGCTTC
CAGTGACACGCGAACGTCGGCCGAGCTCCGAAAATTCGCCCGAAGCCCGT
AGAATCGGCAGGACGTCGGTCGTACTTCGCCCGAAAATCGCCATTTGGAG
CTCGCCGACAAGTCGGCCGAGCTAATTTCTTGATTTGTGACGGGGGCTTT
AGGAGCTTAGGACTCTCTATCACTATGGAAACCAGTCATCACAGCCTCCA
GCACCATTGTAACAGACAGGTCACAGTCTGACAATAATAAGTTCATACTT
ATCTAGCACATATGCATAAATAAAAGGGATTAGAATGTTTCCCATTCTCC
TGACTTAGAGGTGTTGGTTATCAAGCTTCTAGTGGCAGTGACCAGTGGAA
GGGCTGCTAGAAGCTTCATTTACTAATAGTTACTAATAGGCTAATATTTG
CGTATGTAATTAAAAATAAATTAGACGAAAAACGAACAAATCAATTGGCG
GTTTACAAGTAATTTATGTTAGCATGCGTTTTATTGTTCATTTGTAATTG
GAGACTAAGCATAACGCAAGAAGCTATCGATGGACGATACGTCTTTAGTC
TTGACACAGGCAGCTTCTAAGGTTCCTCCGTCAGACCAAGTTTCGCCATG
GCGACCAGTCGCAACTTCTTCCGGTCAACCAGTATCACGTGAACCGAACA
AGCTGCTTTCCTGATATGTTCCAAAGCACTGATTAGTTACGGAGGGGTTT
TATGTTAAAGGCATCCAGAGCATTTTATGAGGCGTGAAACTCGAATAAAA
AAACTCAAATTTCTAGTCATTCCTACACATAGTAAGTTTCAATGACACTA
TTACCATTGCTTATCGACATCAAAGGAGCAAAGATACGATGTCGTTGTGT
GGTGAGAACTGATAGAAAATCCAAGCCCGAATAGACTGATCCTGACTGTC
CATCACAATTAGCGGTTCGACCAATGAGAGAGTGACTGCATGTCCGTCAA
ATATTTGCATTTTTATGTTTTAATTTTGCATTTGTACGTTTTGACGGAGG
TTGGCGGGGCTATAGTATCGGTCTATATACAGTAGGCGGGTGAAACTAAA
AGATTACTTTGTAGCTTATTTTTGTGCCGCTTTTGAGCACTTTTGATCAA
AATCTGCACGCATATGTGGTAAACAGTGGC Coding sequence (CDS) from alignment at Sc0000179:238766..244895- >Blg01163.1 ID=Blg01163.1|Name=Blg01163.1|organism=Branchiostoma lanceolatum|type=CDS|length=447bp|location=Sequence derived from alignment at Sc0000179:238766..244895- (Branchiostoma lanceolatum)
ATGATGATGCAGAATGATCAGATGAAGGTGGAGGAGGCACTAGGATGGAA
GACGATCTACAGTATTTATGCTTATGGTGATGGAGCTCCTACAACAGTGG
TGTCGACAAATGTGACGGAAGAGTTAGACGGACAAACTGACTACCCAGTT
ACCGAAAGCTCATCCCGTGTGTTGTACATCGTGATCGGGGTGGTCGTCGC
AGTGGTTGCGATAACACTGCTCATCGTGCTGATAGTAAGCAGGGGAATGA
AGAAACCAAACATGACCAAGCCGAGCTATGAAGTCCACAGGAACATCAGC
CCAGACCCACCGATGGCTGGTCACGTGAACAGGGCTCTGAAAACCACGGA
TGAGCACATGGCGTGGCCCATGGACCATGAGACCCGTGAAGGACAGATCC
CGATGACAAGGATTGACATCGACAGTCTCATCAGCCCAATGCGTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01163.1-exon-Sc0000179-1570713199:244406..244895 | Blg01163.1-exon-Sc0000179-1570713199:244406..244895 | Branchiostoma lanceolatum | exon |
| Blg01163.1-exon-Sc0000179-1570713199:243549..243693 | Blg01163.1-exon-Sc0000179-1570713199:243549..243693 | Branchiostoma lanceolatum | exon |
| Blg01163.1-exon-Sc0000179-1570713199:241162..242127 | Blg01163.1-exon-Sc0000179-1570713199:241162..242127 | Branchiostoma lanceolatum | exon |
| Blg01163.1-exon-Sc0000179-1570713199:238766..239743 | Blg01163.1-exon-Sc0000179-1570713199:238766..239743 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000179 | genome | Sc0000179:238766..244895 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01163 |
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