|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000179:566948..573149+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01159.0 ID=Blg01159.0|Name=Blg01159.0|organism=Branchiostoma lanceolatum|type=mRNA|length=6202bp|location=Sequence derived from alignment at Sc0000179:566948..573149+ (Branchiostoma lanceolatum)
CACCGCCGTGACCCAAGATGGCGGCGCCCATGGAGCTTTGGTGCTGGAAG
GGGGACTGGGGCCTTCCATCGATCGATGTAGACTGTCTAACCGTTATTGT
AAGTGTGAAAACGATCTAAAGCATTGAAAAGACTATAACTTACGTACTAG
AAACAACATTATGGTAATTTACACCTAATTTTGGCCAATAAAGTAGCTAG
ATGCAATATTTGAGTGGGAGGGGGGCGTCTCGTCTGACATCCGATATCAA
CAAACGGCAAGCTCCGTTCCTAGATATCTGTAAATTTAGATTTTACGGCC
AGATTTGTGTTGTTTTTAATTTGCTTTTATACACCCAAGACGTGCCGAGC
ATCCAGCATTCGTGCGATGCAGGCACACCCTGATTTTATGTTGTTCTCTC
GTTAACNCACCCTGATTTCATGCTGTTCTCTCGTAACAGAATCGATCCAT
TATTGAGAAATTGATTTTGGTAAGCTGGCCAAATCTACCGAGTCCAATTT
AAGGTTGATACTATTACTGTATTTCTCGGAATTAAGGGGGTGCTTTTCAA
TTACATTGATTATTTATAAATTTAGGCAGATTGAATGAAAGACATTAATC
ACATGTTGGTGTTCTTTTTTCTACTCTGTAGGCTTATGCCAAGTTTGCAG
GTGCCCCGCTGAAGCTGAAGAAAATCAACAACCCATGGAAATCTCCATCA
GGTATGCACAAGTCCCTAGGGCCCTCTCTACCAGTGGCGATGTTAATACA
TTGTATATACCTGATTTTTAAAGATTTTTCTCTCTACCCTAGATACTCGC
ACGCTTCGGACACAATTCACTGATACTGATTTCACTAAATGGAAAGTCCT
CCTCAAAAGTTATTGAAAAAAAGATCGAAGTTGCTCCACTCAAAGTCATT
ATCAGCGCCGGGTCGCAGCCGTGAAAACAAAGCAAATTCCCCAAGCGCTG
GGCGTATGCATATTGGGGTAATTCGCACCTTGACGCGACTAGAGCTGTGT
ACCTAAACAAATTTTAGGTACAGGTACAGGTACAGGTACACGGGTTTAGG
TACAGGTCCGGACCTGAACCTGTACCTAAACTACTTGTTCGGAAAATGCT
ACATTTTCAATAAGGACAAAAGCATGTTTGAACTGGTAAAAACATGATAT
TTGATTGTGCTGGGTATTATTTTTATGAAAACACAGATGAAAATTTGACT
CCAGCCATGCAAATGTGTTTTCTCTGCTTTAGAGTGGCTTTAGAGCACTG
CCACGGTAAATTCATAGTAATTTTTTCTGTCAAAGTGGCCATCCCCTGAG
TCAGGTCCAGTACCCATACAGCAGGGTCAGGTATTTTGGACCTGTACCTA
ATTGATTGTACCAGTACTGTATCGGTACAGTGTACCCGTACACAGCTCTA
GACGCGACATTGACTTTTCACACCAGTTATACCCATAGTACAATAGAGAC
TTAGCCCGTCCTCTCTCCTTCTATATAAAACCTCCTTGGTTAGACATAAG
ATACGCAACTGGACAAAAGGCGATGGATGCTACCTGAAGTGTCTGACCGT
TTCCAAAATCTATCTAGTTTCTTGAGTAACTGTTACCCTGTGGAAAATGG
TGTAGATTGTTTTTTGAATTTGAATTTTCATGCATTGGTGTGTACATGTT
ATCTTTGTACAGGTGCCCTACCAGTGTTCAAGAATGGAGAAGAATTGATC
TTTACATCTCCAGGAAAGATACTTGACTACCTTAGACAAGAGGTATGTGA
CTTCCTTGTCTACAAAAACATTTTCTGCTTTTCAATATCTGATATTACAT
GTATAGGATAAACTGAGTAATCCTACTCTCCAAACTTTCTCCTTTATGCG
ATTTTTACCCTAGTTGTGCAATGGTACATGTAGATATGATGGGTGTGACT
ATGTGGAGCCCTATGTATTTGTGATCATCCCTCTTACCCTGAGATTGTAT
TATGTTGCAGAAATTCAACGCTGACTATGAACTGACAGCAAAGCAGAGCT
CTGATGTGGTGGCATTCAAATCACTCTTGGAGGAAAAATTTGTACCAGCA
ATGGTAATGATTTTGACATTCAAATTGTATTGAATACAAACAATTTCCTT
CATTTCAGAATATGATATAATATTGGTACATAGCTTTAGAGTATATACCA
AACATTTACCTTGCCAAAAATTATCTCTTCAATATACAGTACTCTGTAGT
TGATACAAATCAGAATTATTTCTTATAACAGAGCTTTCCTACCTGTTGCT
AGTTTGTCATCATTCTTTTTTGTCATCATTTTCTCTTGTATCAGCTTCAC
TCCTTCTGGATGGATGCCAGGAACTACGTAGATTTCTCGCGCCCGTGGTA
TGCCCGTGTACTGCCATTTCCTCTGAACTTCTTCATCCCCGGACGGATGC
AGCAAGCTGTGGAGGAGAGACTAGAGTGCACACGGGGTGGGGACCACCTG
ATAGATGGGGAGATGGAGGCCCAGGTAATTTTTTTTCTTTTTTTTAACAA
ACTCGATCAGTGCAAGGCTGTAGGGGGCCACTCATCAAAGCACTGAACTA
ATTCTTACTGTAGCAGCATCTCTTCGCCCTAGGTCAGAAACATCAATGCT
TGAGACAAGCAGGACTTCACTGACCCATTAGGAGAAGCAGGGGTTACGAA
GGCTGCTCGGGAAATTCCCTACCCCATTTAGGCTGGAATGTTTTGATCCA
CTCACACCGGGGCATGCCCCTACTCTTTTTTGAAAGATGTGGTGGGTTCT
TTTACGTGCTCAAGGTGTGACTCCTCAAACACAGGACCTCCATTTAACGT
CCTATCCCTAGATGAGTTAGGTACTCATTTACAACTGAGTGAAGTGAGGA
AAGTCGTGTTAAGTGCCTTTCCCAAGGGCAAAATTTGCAATAAGATCCAG
ATCCAGCTTTTGATGCAATGTTGACCTGTCATTTCAATGACTGGAGTTCA
AAGAAAGTCTTTGTCATTCCTTGACAAATTCTGGAGACAGTATACCATTT
TGGGTACTGTAATTCACTTTATCTTCACGGTAGCAAATTTTCATGGTGTA
AGGAAAATTGACATTTTCACTGAACTTAAACTTCACGGTGTTGGCAAGTG
ATTTACAGAATGGAAGTTTGAAGGAATCATAGACAATAACAACAGGTCTT
TTCACGGTGATGATAAGTTCACGGTACAGAGGTGAACATGAAAACAGTGA
ACGTAAAAGTTACAGTGAAAGAAACGAGAATTACAGTATGTCCAATATCT
GTGTTGAAAATTACAGTTCAACTTCAGAATCATTCCTACCAACATAAATA
CACAGATGAATTTTCAAGCACAAATCTAGCTTGTTATAACCTGTATGATC
AATTTGCATTTTTAGCATGTACATTTGTCCTGCCATGTTAAACATGTATG
ACTTTGTAGTTAACTATGATTTTCTCTGACAAGACCTGGATTTTTTTTTC
TTTTTCAGATCTACAGAGATGCTAAAGAGTGTTTGAACCTTTTATCTGGA
CGATTAGGAGAGCAGGATTTCTTCTTTGGTCAAAGGTATGCTATATATAT
ATGCAGTTTTGTTGTGCCCACTGCCAGCCATTGATAATGTACACTCAGTG
TACATGGACTATTGTCAAAGAGGCTTACCACTTGAAGCATTGTTATCAAT
TGTGGCGGTACTGTTTGGATGAAACAATTACATTATTATTCGTATCCATT
CCAATCTCTGTTGTTGCAAGTGTTAGTACATTTGTTTGTACCACAACTTA
AAGGCAAAAAAATGGAAATAAAAAAAATCATCTTTATGATAGTGACATTT
ACTAACATTGCTTAGCACATTTGCGTAAGAAACTCATACTTTTAGGATGT
TAAAACCGCGCAAAATTGTGCCGTACGATGATCCCCTTAGTTTCTCGAGC
CTACCAAAACTCCGGCCACGATTTTCGGTGAATTCTCACATCACAACAAC
GTCGTATTTTTGCATCATGGATGTTGCTATACATTGTGATGGTGTTGTGT
GAACTAATCATGTATAGAAATGACTAAATAAACTGACTTTCAAAATCCGA
TTTTTCGGACCCTAATATTGCTTAGGTTTCCTTTAGAATGTTAGACACGA
GGGAAATCATGTGCAAAACATACAGTATGGTTATGAAAAGACAAAACCTT
CAAAATCAGTTAGTGAGATGAAGTATCTAGATGATTTTATCAACTTGCAC
TTTTACCTGACCGTGTCTCCCCCTAGCCCCACCACCCTGGATGCTATAGT
GTTTGCCCACATTGCCCCGGTGCTGAAGGCCCCCCTCCCCAGCAACCAGC
TCCAGAGCCATCTCAAGAACTGCAACAACCTGGTCGACTTCTGTGCTCGT
GTAACCAGCCGATACTTCCCATCAGACTCAGAAGGTACAGGTTTCAAGCT
ATTACTGTAAATGCAGAAATGTTTGTGGTGGTTTTATGTTCGCGTTTTTG
CTCTTCGCCATAAACTTAAAACCACAGCGAAATTTTTGCCCTCCTACCCC
CTATCTATTATTGTCTCAAACGCCAATTTAAAACCACCGCGACCCTCCAT
TTTCTAAATTAAAACCACACAAACTTAAATACATTTACAGTATATTTGAC
ATGGTGCATTATCAAACATCTCACAAGCATTGTCCAGTGGGCTGCCAGTG
GGCTGAGTATTTTCTACATCTTTTATTAGACAGAGAGCTGCTACTAGTAT
TTGTGTACATTTAGAAGTGATCACGAGGGAAAGTTAGAATTTTCTCTGTA
GATTATGATAAAGAGCACCTTTGCTACACCTTTCCTACAATTTGTTAGGA
CCGTTATTGTTTAATATATATGTTCTTTCCAGACATATTGTTATTGTTGA
GCTTATAGATTCACAATAAACTTATCTATTTCCCTTTAGATGCAGACCAT
TCAACATTCACACCAAGTACAGTAGATGACCGCCAGTACAGCACAACCAA
CAAGATCCTGTCTGTGGGCGTGGCCGTCGCTGCTATGGTAGCATACGCTC
TGCTTAGTGGACTAGTCCAAATTGACCTTAGTGGGGATGATGATGTACCG
GTGGCCCCTCAGTCAGATATCAATGTTGAAAATTTCAGGTTTCAGGAAGA
AGAACAAGAGGATGACTAAGTTAGGGATTTGTGATATAAGATGAATAAGC
TTGTCTGGCAGCTTTGTTTTGTGACACGTACATTTGGTACTTTTTTAAAG
GCATCCAGAGCATTTTATGAGACTTGAAACTTGAATTAAGAAACTCCAAT
TTCTAGTAATTCCTACACATAGTAAGTTTCAATAACACTATACCATTACA
TATTGACATTTAAGGAGCAAAATTACGATGTCGTTGTGTGGTGAGAACTG
AAAGAAAATCCAAGCCCTGACTGATCCTGACTGTCCATCGCAATTGGCGT
TTCGACCAATGAAAGAATGACTGCATGTCCATCAAATATTTGAATTTTTA
TGTTTTAATTTTGCATTTCTACGTTTTGACGGAGGTGGGCGGGGCTATGG
TATCGGTCTATTTACACTAGGCGCGTGAAACTAAAAGATCACCATGTTAT
GGCATGTAGCTTATTTTTGTGCCGCTTTTGATAAGAAATCCGCACGCAAA
TGTGGTAAATAGTGATGTCAAATTCATAAAGATTACAGCAACTCGAATAT
TTCCAGTTTTCAAGCATCATAAAATGCTCTGGGTGCCTTTAAAGTATAAT
GAGTAATACGCAGTAGATAGACTGTGAATGTGAAGCATCAACCATATTTA
AAAAAGATAGTCTGATTATTTCTTGTAATTATTTCAAATACCTACCCATT
AATTATGTCTACATTGTCCAAACAATAAGGGCACTTCTAAATCATTGAAT
GTTTACCTTACCGATTTTTATGAGATTGGATGGTATTCTGTTTGTACTGA
AAAAGTTTACAGAAGTAAATAGTATGATGTGTATTCTTTGTATTAAATCT
GTGTAAGGCATTGTAAAACAACTGTTGGTTATGACAAAGATGTCATTTTT
TGTACCATCTTTAAATGTACATATTGGTAGGTACTTGAAGAGTTAATTGA
TGATTTATTGCATTTGCGTCTTAAAGTGTTCCTTGAATTTGTCATTATGA
CAAGATTTCTCTTGCATGTCTTTTTAGGGACAGAGTAGGAAATACAATTT
TAAACTTGACCAGTAAAAAGAATAGCAAAACTAGCTAGTAATTATGATAT
TC Coding sequence (CDS) from alignment at Sc0000179:566948..573149+ >Blg01159.0 ID=Blg01159.0|Name=Blg01159.0|organism=Branchiostoma lanceolatum|type=CDS|length=969bp|location=Sequence derived from alignment at Sc0000179:566948..573149+ (Branchiostoma lanceolatum)
ATGGCGGCGCCCATGGAGCTTTGGTGCTGGAAGGGGGACTGGGGCCTTCC
ATCGATCGATGTAGACTGTCTAACCGTTATTGCTTATGCCAAGTTTGCAG
GTGCCCCGCTGAAGCTGAAGAAAATCAACAACCCATGGAAATCTCCATCA
GGTGCCCTACCAGTGTTCAAGAATGGAGAAGAATTGATCTTTACATCTCC
AGGAAAGATACTTGACTACCTTAGACAAGAGAAATTCAACGCTGACTATG
AACTGACAGCAAAGCAGAGCTCTGATGTGGTGGCATTCAAATCACTCTTG
GAGGAAAAATTTGTACCAGCAATGCTTCACTCCTTCTGGATGGATGCCAG
GAACTACGTAGATTTCTCGCGCCCGTGGTATGCCCGTGTACTGCCATTTC
CTCTGAACTTCTTCATCCCCGGACGGATGCAGCAAGCTGTGGAGGAGAGA
CTAGAGTGCACACGGGGTGGGGACCACCTGATAGATGGGGAGATGGAGGC
CCAGATCTACAGAGATGCTAAAGAGTGTTTGAACCTTTTATCTGGACGAT
TAGGAGAGCAGGATTTCTTCTTTGGTCAAAGCCCCACCACCCTGGATGCT
ATAGTGTTTGCCCACATTGCCCCGGTGCTGAAGGCCCCCCTCCCCAGCAA
CCAGCTCCAGAGCCATCTCAAGAACTGCAACAACCTGGTCGACTTCTGTG
CTCGTGTAACCAGCCGATACTTCCCATCAGACTCAGAAGATGCAGACCAT
TCAACATTCACACCAAGTACAGTAGATGACCGCCAGTACAGCACAACCAA
CAAGATCCTGTCTGTGGGCGTGGCCGTCGCTGCTATGGTAGCATACGCTC
TGCTTAGTGGACTAGTCCAAATTGACCTTAGTGGGGATGATGATGTACCG
GTGGCCCCTCAGTCAGATATCAATGTTGAAAATTTCAGGTTTCAGGAAGA
AGAACAAGAGGATGACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01159.0-exon-Sc0000179-1570713199:566948..567045 | Blg01159.0-exon-Sc0000179-1570713199:566948..567045 | Branchiostoma lanceolatum | exon |
| Blg01159.0-exon-Sc0000179-1570713199:567579..567648 | Blg01159.0-exon-Sc0000179-1570713199:567579..567648 | Branchiostoma lanceolatum | exon |
| Blg01159.0-exon-Sc0000179-1570713199:568610..568689 | Blg01159.0-exon-Sc0000179-1570713199:568610..568689 | Branchiostoma lanceolatum | exon |
| Blg01159.0-exon-Sc0000179-1570713199:568908..569000 | Blg01159.0-exon-Sc0000179-1570713199:568908..569000 | Branchiostoma lanceolatum | exon |
| Blg01159.0-exon-Sc0000179-1570713199:569242..569421 | Blg01159.0-exon-Sc0000179-1570713199:569242..569421 | Branchiostoma lanceolatum | exon |
| Blg01159.0-exon-Sc0000179-1570713199:570406..570482 | Blg01159.0-exon-Sc0000179-1570713199:570406..570482 | Branchiostoma lanceolatum | exon |
| Blg01159.0-exon-Sc0000179-1570713199:571174..571331 | Blg01159.0-exon-Sc0000179-1570713199:571174..571331 | Branchiostoma lanceolatum | exon |
| Blg01159.0-exon-Sc0000179-1570713199:571837..572147 | Blg01159.0-exon-Sc0000179-1570713199:571837..572147 | Branchiostoma lanceolatum | exon |
| Blg01159.0-exon-Sc0000179-1570713199:572642..573149 | Blg01159.0-exon-Sc0000179-1570713199:572642..573149 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000179 | genome | Sc0000179:566948..573149 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01159 |
|
