|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:359627..364668+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01098.4 ID=Blg01098.4|Name=Blg01098.4|organism=Branchiostoma lanceolatum|type=mRNA|length=5042bp|location=Sequence derived from alignment at Sc0000003:359627..364668+ (Branchiostoma lanceolatum)
CACGCTTGGAAATGGTGCTAACGGTGCAGGTGGGGAGGGGGGCGGACCGC
CCCTGAGGAGAAATAACCTTTATTTATTTACTTTTTTCAACCTCCTTGCT
TTATTACACGATACAAAAAGGCGTGTGTAACAGTAGAGATGCTTACTGCA
ACAGTTGGAACTTTTAGAAGAAAGAAGAATGAGAAATCAACAAAGACCTG
ATTGGTATAATGATCAACTAGTTTGTAAAGACAACTTTCAGCAGGCCTGG
AATAAAGGTGTGGGGAGGGGGGCGTCAATGTGAATGGACATGATGATAGA
TTATAATCGTTTAACATTACCTGACTCAGAGTCACTTATTGTGCTTGGGA
CAGACAGATGTCCTTTCTTAGAACATGCAACGAATACAAAGTAGCAGCTG
ATCCACAAAAGAAGTTGTTTGATTTGATTTATTTGACCGTAAAAAGAAAT
TGTAAAAGAAGTTGTTCTCTTCAAGTTCATGATCATACTTTCTCCACTCT
GAGACTAACTTTAGAGGTAACAATGAACTGTGGTACATGTCTTAACACTA
CCTGCAGTTTTCATGTACGTATGATTTCATGTAAATATATTAGTTTTCGT
TGACAGCAACGTTAACTGTTTGCCACCATCAAGGAAATCTATATGTGGCA
AATATTTACGCCAAAACAACACTACTGAGACTAGAGGTTGAACCATTGTA
TGTCTAAATTATGCTACTGTAAACATGATAATGTATTTATTTCCCTACAG
CAACTGTTCGCCACCATCGAGGACATCTACGTGGCGAACATCGAGACGGA
CCGTGGAGTCAGGGAGAAGATCAGGTTCTACGACACGGCAGGCTTAGTGA
GTTAATATTAACTTGTATAACTATTGATAAGTTAATATTAACTTTTATAA
TTATTGATAAGTTAATACTAACTTGTGCAGCTACTGATAAGTTAATGTTA
GCTCATCTTACATTGTACAACTCTGGTGAGTTGATATTAACATACATAAC
TAACTGATAAGTTAATATCAACTTAGGTTGTAAAAATCAGTTACTAGTTA
TCAATGATAACTTGTGCATACTAGTACCTTTTTTTGCTTGAGACAGGACA
GGTTAGTTGATATTGACTGTAATATTGTCAGACCAGGACTGACGAGTTAA
TCACTCACTAACTAACCAGTTTATTAGTCCATAAGCTGTAAGGGTTGGAC
GTATTCATATTAACTTTTACTTAAACCAGTGACATGTTATTGATTTATGC
TTTTTTTAATTTAAGACATTCATTTTACAATTTCAGAGTTCGTCGAGTCC
AGAGCTGCCCAAGCATTACATCACTCTAGCAGATGTAAGTAACAGGATTA
ATCTTAGTTTTTACATGTACCGCCTCCAAGACTACCCGGCTAGGACAATA
GGAGCTTAGATATGTTTTCCATAAGCAGAACAATGTTACTGTTAATGAAT
GTTTGTCAATCATGTTTAGTGGATTATTGGTGTGTTGATTGGATAACCCC
ATAAGGTTTTAAGCTTTGTGAGCAAGGGGTAGCTTTGAGGAAAAAGAGAT
ATTGTATTTCCCTGTAACTATTGAAACAAATCAAAGGAGCGAGTAGAAAC
AAGTGATCCCAACCGAGATTCGAACCCACGCCAAAACCGGCAGCCCAGAT
CACAGGCACACACGCCTTAACCACTAGGGTAAAAGGTCGCGACCAGCTAG
ACTGGTCAGTTGGAGGCGCTTGAACCCCCACTGTTACACTATCATGACTG
ATTAGATCCAGGATACAGCATACTTCACTGTAAACTGGGCGTAACAGGTG
TACAATAATCAGTTCGGTCAGATACCAAATCTCGGTGCACAATCCTTTTT
ATTCAGTTGGTCTGGTCAATCCAGCCTTCTCTCATGACTCTCTCATACCG
TCCGACCCCGGTCACTGACACCGGTCCTCCCCCAAGTTCTGGGCCCTACC
ATTATCTAGTGACGGGGGTGACACCGATCATGACACTGAGACAATTCTGT
ACGTTGGCAAATCTTGTTCTGTGTCTATCGCCCACAGGGTTTTGTGCTGG
TGTACAGCACCACTGACAGGGAATCCTTCAAGAGAATCGACCTGCTGAAG
AGAGACATCGATGCTGCCAGGGAGAAGAAAGAGGTCAGCATTTAAGGGTA
ATGGGGCTCTAGGAAGGGGAATTGGGAAGCTAAGAACTATCTATTATACT
AATTTGACATAATCATGACATACTTTATACTGGATAGGTGTGTCATTTGT
TGGTGAAACAAAGTTTATATCACATTGCATTTAGATCTAGTGAGATGATG
AGAATCATTGTTTTTGTTTACTGTTGTTTCCCAGGTAACAGTAGTTGCCG
TGGGAACCAAGACGGACCTGAAGGATCGGAAGGTGGAACTGAGGGAGGCT
CAGAACTGGGCTCAGAAGGAGAAAGGTGTGTGTGAAAACTCTGGTTACTT
AGGACAGTAGAAACTTTGTAACTCCACAGTTACATTCCTCAGCTTGCACC
CTACCATATAACCCCAGCGTCCTTGGCAAGATCTGCGAGTGTGGCTTTTT
TTTTGTTGCTGATAATGTGCTTTTTCCCTCATGGCAAATTAGTTCTTGCT
GTGCTCAGTTTTTTGTGGACTGGCCCTTTGGAGTACAGTAACTGTTAGAA
CTGATCATGAGTGATATGCCATCAGAAAAAAAGCTTATCATACGCCCAAA
AAAAGCCTGACTTGTAGAGCCTGCTAAGGAGGCTCCTAACCCTTCCTCCT
GATACTAATATGTGGTCTCCTCCTTCTGTTCCCCCTCCTGACATGGTCTC
CTCCTTCCATTCCAGTGTGGCTGTTTGAGGTGTCGGTGAGGGAGAGGAAA
GCCCTGATGGACCCGTTTGTAGTTAGGTCTCATCCTTCCGTTCCCCCTCC
TGACATGGTCTCCCCCTTCCGTTCCAGTGCGGCTGTTTGAGGTGTCCGTG
AAGGAGAGGAAAGCCCTGATGGACCCGTTTGTGTTCCTGGCCAGCAAGAT
GACTCAGCCACAGAGTACGGCTCTCTTTACTTGTTTTTTTTCATTACTTT
ATTGTCCCTGTGGTGTAGTGGCCTGCGCCTTTGTCTCTCACCACATCTGG
TTCCAATTACTTGGATCAGAAGGACTGGGGTTCAAGCCCCAGGTAGGACA
TCTCTAGACAAGAGGCGCATTGAGTCATACCAAAGACTTTATAAAAATGG
TACATACTTCTGAAACAGTATGGAAGTTAAACACACTTCACTGCCAGTGG
ACTAGCCCCCTGCTACAGTGATTGCACAACAGTGTGGCCCAGGGCTATGA
AACGGAGATGGGCACCGCCCTATACATCAATAATGGTGTTGGAGGATTTT
AACTTTAACTATTGTTATCTCCATGAGAAATGGAGATATAGTTTTGGGTG
TGTCTGTCTGTGTGTCTGTGTTTCCGCACTACTGTAGTCAGCATAACTCA
AGAACCTCTTGATGGATTACAATATTTGATATGTGGGCGGGTGTTCTGAA
GCCGAAATTCAAGGTACTGCCGCAGAAGTTACGTTTTTGTGTCTTTTCAC
CTGGACGTGCTATGGTCTTGATTTTTGTGTGGTAGATAGCTTGTTTTATT
TGTATTCTGTTACCTGGTCAATTGTCTACCTCAGAAATCTGCCATATATA
TTCAGCTAAAGGGACTTTACCTGAGACCTTAGATCCTCCCACAACTTTGT
TGCATACATGTAGGTCGACTTGGCGGCAAACTTCCTCTCTCCAAAGGTTC
CGGTCTTGTGTTGCTGCTGCCATTTCCTCAAGCGAATTTATTCCCATTTT
CTTACCATCATTTTGTAGTGTACTTCTGAGAGATACCTTAGGCTAAAGGA
ACTGCTCAATGTATATCCAAGATTGCTACATGAATAAAAAAGGCTCAAAC
TCAAAGTTGATACTATGGGTTACTGTGTGGGATTGATGTTAAGTGCAGTT
GTTATGCTAGTGAGAATTTTGCATGTCTGATTTTTTATGTTTTTTATCTT
TGCAGCCAAATCAAGATTCCCGGCTTTGGGGCCAAAGGTCAAACAGACAT
CCGTCAACGACAGCTGAAAGGCTATTGGATGATGGTCACATGACCTTCCT
GTGTAGCTACGTTGATGTATATATTTCTGTCTTTGTAAAAAGCTTGTCTG
CTGAATACTTATATAGTAGTTATTATCTAATTGATAATAGAATAGAAAGT
ACTATGAATAAAAGACTTACTGCAAACCTAATGCACAAGTCAGTAACATT
AAATTTGTATTTGTATATCATAAAGTTTGTACCTTGAGTTGTTTGCTAGT
CTTTTGTATGTTTCAGAAGGCCCCTAATTTAACCTGGATGCCAAATTCAT
ATTAGATTATATTGTCAGTTTCTGGTGATGACGAATAAGTAGCATTATAT
TTTGTGCAAGTCATTCTTGGAGTAAGTTGTAAAGAAGTTATTCTTTTTTT
ATAACTAATTTAAAACTAATTCGAAAGTTGAACTATGATTAGCAGTACAG
CTGATTAAATGTAAACTTTGAGGACAGAATAGAAGAGACAAAGCTTGTGA
TGGAGTTTGCTCTTGCATTTTAATGAATGTATTCACTATACACCAAAATG
ATGTCTATCAAGACTCAGATATCAAGGAAAGCGATCTTAATTATGCATAA
ACAAAGATTCGTAATGGGACAAGGCATCATGGGATGTGTGGGTCAAAGTT
TAACTTGTATCAGGTGCGAATGTATAAAGATTGTAACATACAGAAGATTT
CATTGACATTGAACTTTTAGTGACGTATTACTCATAACTGTCTATAACCA
GCCCCCCTCCCACTACAACAGAACTGTGTACTAGGATATCTACAACTGCC
CTTTGACCTCTGACCCCTAGAGGTCCTTGATGACCTCCTCGACCTCCTCC
TTGCTGAACATGTGGAAGCGTTTCTCCCGCGTGATCGTGGCGACTTCGAC
GTTCGTCGAGTTCAGCTTTTCTTCCATCACCTGCTTCAAGATGGTCAGCG
CAGACTTAAGAGCTTCCTGTAAACAACAAAGAAACAAGCAGG Coding sequence (CDS) from alignment at Sc0000003:359627..364668+ >Blg01098.4 ID=Blg01098.4|Name=Blg01098.4|organism=Branchiostoma lanceolatum|type=CDS|length=498bp|location=Sequence derived from alignment at Sc0000003:359627..364668+ (Branchiostoma lanceolatum)
ATGGTGCTAACGGTGCAGCAACTGTTCGCCACCATCGAGGACATCTACGT
GGCGAACATCGAGACGGACCGTGGAGTCAGGGAGAAGATCAGGTTCTACG
ACACGGCAGGCTTAAGTTCGTCGAGTCCAGAGCTGCCCAAGCATTACATC
ACTCTAGCAGATGGTTTTGTGCTGGTGTACAGCACCACTGACAGGGAATC
CTTCAAGAGAATCGACCTGCTGAAGAGAGACATCGATGCTGCCAGGGAGA
AGAAAGAGGTAACAGTAGTTGCCGTGGGAACCAAGACGGACCTGAAGGAT
CGGAAGGTGGAACTGAGGGAGGCTCAGAACTGGGCTCAGAAGGAGAAAGT
GCGGCTGTTTGAGGTGTCCGTGAAGGAGAGGAAAGCCCTGATGGACCCGT
TTGTGTTCCTGGCCAGCAAGATGACTCAGCCACAGACCAAATCAAGATTC
CCGGCTTTGGGGCCAAAGGTCAAACAGACATCCGTCAACGACAGCTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01098.4-exon-Sc0000003-1570713199:359627..359655 | Blg01098.4-exon-Sc0000003-1570713199:359627..359655 | Branchiostoma lanceolatum | exon |
| Blg01098.4-exon-Sc0000003-1570713199:360377..360472 | Blg01098.4-exon-Sc0000003-1570713199:360377..360472 | Branchiostoma lanceolatum | exon |
| Blg01098.4-exon-Sc0000003-1570713199:360913..360960 | Blg01098.4-exon-Sc0000003-1570713199:360913..360960 | Branchiostoma lanceolatum | exon |
| Blg01098.4-exon-Sc0000003-1570713199:361664..361759 | Blg01098.4-exon-Sc0000003-1570713199:361664..361759 | Branchiostoma lanceolatum | exon |
| Blg01098.4-exon-Sc0000003-1570713199:361961..362051 | Blg01098.4-exon-Sc0000003-1570713199:361961..362051 | Branchiostoma lanceolatum | exon |
| Blg01098.4-exon-Sc0000003-1570713199:362554..362640 | Blg01098.4-exon-Sc0000003-1570713199:362554..362640 | Branchiostoma lanceolatum | exon |
| Blg01098.4-exon-Sc0000003-1570713199:363632..364668 | Blg01098.4-exon-Sc0000003-1570713199:363632..364668 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:359627..364668 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01098 |
|
