Blg01039.2 (mRNA) - B. lanceolatum

Overview
NameBlg01039.2
Unique NameBlg01039.2
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:2246562..2248096+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg01039.2 ID=Blg01039.2|Name=Blg01039.2|organism=Branchiostoma lanceolatum|type=mRNA|length=1535bp|location=Sequence derived from alignment at Sc0000003:2246562..2248096+ (Branchiostoma lanceolatum)
CGTCACCGGCGCGTTTTCCGCCATTTTCCTCCTGAGCCGAAACGGGACTT
CTTTGTTTCCCTGTCTCCTTTTCCACAGCATTCCGTCTGAACTACCGCAG
CAGCCATGGCGTACAAGGGACAGAAGGTGCAGAAGGTCATGGTGCAGCCC
ATCGTATCCTTTTTGTGTGGTTCGCAGGGATGCTTACATTGTTTTTGTTG
TTCGGTGAATTTTGCACGTGTGCCCCCCTCCCCATATCCACACCTTGACC
ACTTGTCATGTTTTATGTCTAAATCACATGTTGCGTTCAGGTTTTTCACT
GGATCAAATCAGTATGAAGTTACAGAGTTGCTTCTTTCATTATTTAAGAT
GATACTGTATTCACTTATTTCTTACTGGCCTGGCTTATGAAAAATACTGA
ATTTAAATGTCCAACAATAGAAAATAATTAGATTGAAAGATTTATGCAAT
TTTCCTTAACCAGACTTTTTCAGAACTTGATCTTCAGATATCTGCAAAAC
GTAAGTACACATTAGAACGTCAATGATAATCTTTTTCAAGTGCCATTTGT
CTTTCAGTACTGGCTGCATATCTTGACTTCTTCTTTTATAAACCATTATT
GTTATAATTGTATCATGGCAATTATCACAAAGATGATTTGTTTCCATATC
ATCTAAGAAGAAGCTGAACAGTCTGACCTGTGCATGCTTTACAGTTCACA
ACTGTAGTGGTCCAATTGCAACTTCAATGTACATGAGAAGAGCATTTTTT
TTCTCTCTCTGATTCAGTCTGAAGTGGTTAAGAAGACTTTATTTTTATAT
CATCCTGCAGCGCTCACGTATCCAGATCTGGCTGTACGAGCAGACCAACA
TGAGAATCGAGGGACACATCATCGTAAGTTGGGGAACCTCCAGATAGATC
ATAAACTCATTCCAATAATGACATTGACAAATTATGTGCTACCAACCATT
TAGCAACAGCCACCCCCCGCACACACACCCAACTACTGCTACATGTAGGT
ACAACAGTATCATACCATTATCAATTAACATTAGTATGAGTTGATGAAGC
TTACCCATTTATGTGAACCACAGCAATCATTTTCAGTTAATTTTATTCCT
TCAGTTTGTCTTTCCCTGTAATGTTTTTGCCTCTCTCCCTTGATTTCATT
GTAATGTCTTTTCTTTGTTAGCAACAGGCTTGGTCAGCCCTGGCTGCGTG
TGCTGAACAGCCAAGGCAATGAATGAATAACTTTTGCCTCTCCTCGCAGG
GTTTTGATGAGTACATGAACCTGGTTCTGGACGATGCTGAGGAGATTCAC
CTCAAGACAAAGAACAGGAAGCCGCTGGGTAAGGAACCAAGTCTTCTGTG
TCTTTGATTTATTTCCTCCACTCTTCACGTTTTCTCCTTGTTTTCTCTTT
CTTCACTCCATCTTTTCTATCTCTTCATCCCACCTTACTGGTCACTCTTT
CATACTTAGTATTCTCCAAACTAAGAAGCTTGGCAGAGAGCAACATACAT
GTGAATGTTTCCAACTAACTTTCTTTTTGTATTTT

Coding sequence (CDS) from alignment at Sc0000003:2246562..2248096+

>Blg01039.2 ID=Blg01039.2|Name=Blg01039.2|organism=Branchiostoma lanceolatum|type=CDS|length=246bp|location=Sequence derived from alignment at Sc0000003:2246562..2248096+ (Branchiostoma lanceolatum)
ATGGCGTACAAGGGACAGAAGGTGCAGAAGGTCATGGTGCAGCCCATCAA
CTTGATCTTCAGATATCTGCAAAACCGCTCACGTATCCAGATCTGGCTGT
ACGAGCAGACCAACATGAGAATCGAGGGACACATCATCGGTTTTGATGAG
TACATGAACCTGGTTCTGGACGATGCTGAGGAGATTCACCTCAAGACAAA
GAACAGGAAGCCGCTGGGTAAGGAACCAAGTCTTCTGTGTCTTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg01039.2Blg01039.2-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg01039.2-exon-Sc0000003-1570713199:2246562..2246714Blg01039.2-exon-Sc0000003-1570713199:2246562..2246714Branchiostoma lanceolatumexon
Blg01039.2-exon-Sc0000003-1570713199:2247035..2247061Blg01039.2-exon-Sc0000003-1570713199:2247035..2247061Branchiostoma lanceolatumexon
Blg01039.2-exon-Sc0000003-1570713199:2247372..2247434Blg01039.2-exon-Sc0000003-1570713199:2247372..2247434Branchiostoma lanceolatumexon
Blg01039.2-exon-Sc0000003-1570713199:2247811..2248096Blg01039.2-exon-Sc0000003-1570713199:2247811..2248096Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:2246562..2248096 +
Properties
Property NameValue
GeneIDBlg01039