|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:2244705..2248374+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >Blg01039.0 ID=Blg01039.0|Name=Blg01039.0|organism=Branchiostoma lanceolatum|type=mRNA|length=3670bp|location=Sequence derived from alignment at Sc0000003:2244705..2248374+ (Branchiostoma lanceolatum)
AGACACTGCAAGAAGGTAAGAAGGCTGGAGTCAAGGCTGACAACAATGCT
GCAGAGAGAGGCAAGCGTCTGTCTGAGATGGCACAAGACAGAAAGTAGTT
ACTAGTACCTGTTCTACACAGCAATATATACGTACAAAATAATGAGACAA
CAGGGACAGGAAACTGCTAATTTGAAGAATCTTACATTTTCAGTCACCTG
GGTATCTGAAAGGTACAATATGGTTTCATGTGATGAGACAAAGAAAGCAT
ATCAAAAGACAGGAAACGAAATCTTGCAAACAGTCTTCTCATGGGTGCAG
TTCCGCCCAAGGGAGCCATTAGTACTTGGGAGAGAAGCCCAGTCTGATCA
ATTAATTTTGTCAGGGGCAGCTTGGAGGAAGCAATTAAAAGTAATGATCA
ATCAATTAAAACTTGCACCACACACAAAGCCATTAAAATTGTAGAACAAA
ACACACAAAGGAAGTATTCTCACAGTGGATAATCAGTCCCAAGTGACAAA
AAAATCTGTCCTATTGTTGAAAAGCTTATGAGGCTTATGGCTCCCGGGAA
TTGAACCCGTTCCATCAGTGCACAAACCCAACACACTTACCACTAGCTAT
AGGCTAAATACTTATACTTCTGGACCTTTTAGCCTAGCCGTAAGTGTGTT
GAACCTGAACCTTTCGACCTGAATCCAGACATGAACCAGAGCACGAGTTT
AGGCAAGACACCGTAAGATAGCCCTACCGGTCGAAGGTCATCTGTCACCT
GCACCGCGCCAATCGCGACACTCAAATCAAAATTCATATAAGAGTCTACC
ATTCCACAAAGACTGTTATAGATACTCTTATTACCCTCGCACTGTGAGGG
ACTAGAATTCACTGCCTCAAGAAGTCACGGAGATAGCTGACCCTCCCAAG
TTCAAGGAGGCGGTGGCTGCTCCTGCACCTCAGAGGACAATAAAAGCGCA
GCGCACTCCCCTGGGCGCCTTTCCCAACAAGAGGGGTGTTGCCCAGTATC
AAATCAAGATCAAGGTCTTGGTAGTCCTTCGAAGTCGAACTCGAAGATGA
CAGTCAGTGTAATGAGTTTAGGTACACAGCACTAAATGGAGTGTATCTTT
CCTTATCTTTTCCAAAAAAGTACAATTTCTGTCTGGTATCAGTTGACGAA
AGATCAAGGGATGAACGAGTTTCTAAGCAACTAAGACTGAGACTTGTGTC
CATGGTAACGTTTCCATGCTACCATGGTAACGTTGACATGTCGTTAACAC
ACCATAGAATTTGGCAGGAAAGCGAAACAAAAGCTGTCGAACAAGGAGAG
ACATCTGCAGTTAACAGGGGAAAAGAAAAAGTAATCCGTACAGCCGTTTC
TGACAGACGGCGTCGACAAATGAAAAATTTATGAACCGCGCCCCCCTCCC
CTCGATACAAACAAAACATCATTTTTTATCGAAGAACCCACCAACCCAGT
GGTCTCTGGAGAATCAGTTATTTCCATCGGTGAAAGCTACTGTTATTTAT
GCATATTACGTACATACCGATTGATCTATCGCCTCTTTTCTACGAAAACC
GTTCAGAGAGCAACAGAGCCGCTCGAAAATCGATCAAAACAGCCGCCATA
TTGGAATGTTGAAAAGAGACTATTACATTCTTATAAAGGGGTGAGTTCTT
TTTTATCTATACAACGCAAATTAGATAGTTGTCAAATAGATTTTTGAAAA
TTAAAAGATACAAAAGAAACAATTACATTGTTTATAATTTTGCATAATTA
AATAGTTCTTACTCGAAATATCTGTCAACTTAAATTATGGTAAAAATCCC
CTGTAGTTATAATATAATCGCCCAACAAATTACCTTTCCCCTGTACGCAT
GCGCTAACGTCACCGGCGCGTTTTCCGCCATTTTCCTCCTGAGCCGAAAC
GGGACTTCTTTGTTTCCCTGTCTCCTTTTCCACAGCATTCCGTCTGAACT
ACCGCAGCAGCCATGGCGTACAAGGGACAGAAGGTGCAGAAGGTCATGGT
GCAGCCCATCGTATCCTTTTTGTGTGGTTCGCAGGGATGCTTACATTGTT
TTTGTTGTTCGGTGAATTTTGCACGTGTGCCCCCCTCCCCATATCCACAC
CTTGACCACTTGTCATGTTTTATGTCTAAATCACATGTTGCGTTCAGGTT
TTTCACTGGATCAAATCAGTATGAAGTTACAGAGTTGCTTCTTTCATTAT
TTAAGATGATACTGTATTCACTTATTTCTTACTGGCCTGGCTTATGAAAA
ATACTGAATTTAAATGTCCAACAATAGAAAATAATTAGATTGAAAGATTT
ATGCAATTTTCCTTAACCAGACTTTTTCAGAACTTGATCTTCAGATATCT
GCAAAACGTAAGTACACATTAGAACGTCAATGATAATCTTTTTCAAGTGC
CATTTGTCTTTCAGTACTGGCTGCATATCTTGACTTCTTCTTTTATAAAC
CATTATTGTTATAATTGTATCATGGCAATTATCACAAAGATGATTTGTTT
CCATATCATCTAAGAAGAAGCTGAACAGTCTGACCTGTGCATGCTTTACA
GTTCACAACTGTAGTGGTCCAATTGCAACTTCAATGTACATGAGAAGAGC
ATTTTTTTTCTCTCTCTGATTCAGTCTGAAGTGGTTAAGAAGACTTTATT
TTTATATCATCCTGCAGCGCTCACGTATCCAGATCTGGCTGTACGAGCAG
ACCAACATGAGAATCGAGGGACACATCATCGTAAGTTGGGGAACCTCCAG
ATAGATCATAAACTCATTCCAATAATGACATTGACAAATTATGTGCTACC
AACCATTTAGCAACAGCCACCCCCCGCACACACACCCAACTACTGCTACA
TGTAGGTACAACAGTATCATACCATTATCAATTAACATTAGTATGAGTTG
ATGAAGCTTACCCATTTATGTGAACCACAGCAATCATTTTCAGTTAATTT
TATTCCTTCAGTTTGTCTTTCCCTGTAATGTTTTTGCCTCTCTCCCTTGA
TTTCATTGTAATGTCTTTTCTTTGTTAGCAACAGGCTTGGTCAGCCCTGG
CTGCGTGTGCTGAACAGCCAAGGCAATGAATGAATAACTTTTGCCTCTCC
TCGCAGGGTTTTGATGAGTACATGAACCTGGTTCTGGACGATGCTGAGGA
GATTCACCTCAAGACAAAGAACAGGAAGCCGCTGGGTAAGGAACCAAGTC
TTCTGTGTCTTTGATTTATTTCCTCCACTCTTCACGTTTTCTCCTTGTTT
TCTCTTTCTTCACTCCATCTTTTCTATCTCTTCATCCCACCTTACTGGTC
ACTCTTTCATACTTAGTATTCTCCAAACTAAGAAGCTTGGCAGAGAGCAA
CATACATGTGAATGTTTCCAACTAACTTTCTTTTTGTATTTTTCTCATTA
CTTCTCTGAAAAAAGGTGATAAGTTGCTTCTGTCATTTTCATACTACATG
TACCTCTATTATCTTCTTGGTAGACCTCTGCCTGTCACAAGCAATGATGT
GCTTTTATTTGTTCACCAACAGTTTTGTGTAGACTGTAGATGATTATTTC
TTGTGTTTTTTTGTTCTCTTTAAAGATATAAACATTTATTTTTCAGGTCG
GATCCTTCTGAAAGGAGACAACATCACCTTGATACAGAGTGTCAACACAC
CTTGATACAGAGTGTGGACA Coding sequence (CDS) from alignment at Sc0000003:2244705..2248374+ >Blg01039.0 ID=Blg01039.0|Name=Blg01039.0|organism=Branchiostoma lanceolatum|type=CDS|length=276bp|location=Sequence derived from alignment at Sc0000003:2244705..2248374+ (Branchiostoma lanceolatum)
ATGGCGTACAAGGGACAGAAGGTGCAGAAGGTCATGGTGCAGCCCATCAA
CTTGATCTTCAGATATCTGCAAAACCGCTCACGTATCCAGATCTGGCTGT
ACGAGCAGACCAACATGAGAATCGAGGGACACATCATCGGTTTTGATGAG
TACATGAACCTGGTTCTGGACGATGCTGAGGAGATTCACCTCAAGACAAA
GAACAGGAAGCCGCTGGGTCGGATCCTTCTGAAAGGAGACAACATCACCT
TGATACAGAGTGTCAACACACCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg01039.0-exon-Sc0000003-1570713199:2244705..2244768 | Blg01039.0-exon-Sc0000003-1570713199:2244705..2244768 | Branchiostoma lanceolatum | exon |
| Blg01039.0-exon-Sc0000003-1570713199:2246640..2246714 | Blg01039.0-exon-Sc0000003-1570713199:2246640..2246714 | Branchiostoma lanceolatum | exon |
| Blg01039.0-exon-Sc0000003-1570713199:2247035..2247061 | Blg01039.0-exon-Sc0000003-1570713199:2247035..2247061 | Branchiostoma lanceolatum | exon |
| Blg01039.0-exon-Sc0000003-1570713199:2247372..2247434 | Blg01039.0-exon-Sc0000003-1570713199:2247372..2247434 | Branchiostoma lanceolatum | exon |
| Blg01039.0-exon-Sc0000003-1570713199:2247811..2247889 | Blg01039.0-exon-Sc0000003-1570713199:2247811..2247889 | Branchiostoma lanceolatum | exon |
| Blg01039.0-exon-Sc0000003-1570713199:2248301..2248374 | Blg01039.0-exon-Sc0000003-1570713199:2248301..2248374 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:2244705..2248374 + |
Properties
| Property Name | Value |
|---|
| GeneID | Blg01039 |
|
