|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000003:5727745..5733742- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >Blg00939.1 ID=Blg00939.1|Name=Blg00939.1|organism=Branchiostoma lanceolatum|type=mRNA|length=5998bp|location=Sequence derived from alignment at Sc0000003:5727745..5733742- (Branchiostoma lanceolatum)
ATCCAGTTGCTTGAGTAACTATTTTTGGGTTATGTTAGCAATTTCGTCAG
AAAGATGCATATACGTAGCACCGTTTCACTTGCTGGTTTGTGCAATCGGC
TTATTGACGCTTTCAGTGAACCATGTGCATGGGTTTTACTTTCATTTTCA
TTTGTGTGGGATGATGCAAAAAGAGCTGTCAATGATTTGGGATCAATCTA
TTTGCAGCCATGTTGCTTGACATTCAATTTTCCCAATGAACGGTCAGTTT
CTATCACGTCCCAGGGGGAAATGCTAAGTCCGCGGCACTGCACCTGATGC
CCGACCTCCTCCATCTGTACGGGATGTGCTGTACTGCCGTGATCCTGACC
TTCTACTACGATCAACACCTAGAGCCTGTACCTGACATCGAACAGTACAT
GAAACCGTTTTGGCCCCTCCTGTTGGCTGATTTGCTGGGAATCACCGGCA
TTCTACTGAGGCTTTGCAGTCACTGTTGTTCGGTATGTATTGCGAGTAAT
ATGACTCAGTTGTGAGGCTTAGTGTGTGCGCCTGTGTGTATTTATGTTTG
TGTGTATGTTTGTTTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTATGCGTGTGTTTT
GTGAGGGGAGAGGGTTACTGTCAATGATCTGTATTGACCTCAAACAATTA
AGCAACTGCTAGTAGTAGCGCCGTAGCTAGATATCTGTTATATGATGCCC
TATGTATGTCCGTGTCTTTTTACAGACACCCAATAGGCCAGATGCACCGG
CAGCTGCAGTTCCGATCAGATTTGGCCAACTAAAGGGCATCGCCGGGTCA
CCGCCTTGTAAGTTCATAATCACGGTCTATATTGTATGTATTGTATAAAG
CTTACATTCTTTTTGAATAATATGTGCTGCCTATAACTATTGATCAATCA
CTTTACTAATCGTTTTGTCAATAACAAGCTTGATTATTCATGTTACCCAT
TCAAAGCATAATGGGGTTCCATTTTCTTTTCCTCAAAACTCAATGATTGA
CGATACTGTACATGTTGTATACACTTCATTTAGTTTATTGAACCTCCTTT
ATAGAATTCGCCATCTGTTGACAGTATTTGTTGCCGTCAATTAGATCACC
TGGAGCCGCTTCCAAGTTCCAGTCACATGACAGCCGCTCCCACTGTCTCA
ACATATACCAAGCTACCACCTATAGGACAAGGACAACGACTGGGTAAAGC
TTTTTTTATTACATTTTCCTTCTCCTAACAAACCAATTGTCCTTTCATAG
TACATCCAATCCATGAAATGTGCTCGAAGCCATTTTACTGCTAGTGTTAC
CATTGCGTCCTTGGTAATCATACGTATACTGGATCATTTGTTTCATCTGG
AATTCGTTTATCTTTTAAAGAAAACATGTTAACGAATTCAGTAACGGTGC
AGTACACCTTAGCTTCATGTGAGAAATTGCACATTCCGGTTCCCAGTCAA
GCGCCGGCATTCAGAACAAAATATGAATGGAGAAATAACAAGATGTACAA
AATTGTAACATTTTAGATCAAATGCATCTCGTCGGAGAGGGTGATGCACA
AGCCCTCGGAACCAGTGCCGCAAGGACATCAGTAACGACAAAGGTATATG
TTACAAGTACAGTTCTTATTGTACATGTATTTTTATCTATATCTCTTCCG
TCTGTAGCTGCTAGGAAACTGTAAGAAGTGGTATCATCATGTACGTCACC
TCGTCGACTCTATCATAACGAGGCTTTTGATGGTCTGCATTTAGCTTGAC
AACAAGTGGTTTAGGTTTTGCTATAGTTTAGTTTTGTTCATTCCATCTTA
TGTAATTTTTCCTGTTTAATCTAACAAATTCAGAAACTCATAATCATTGT
CCCACATGATCTAGAGTTGCACCTTCAGTCGTATGCAATAGATAATGGAC
ACTGTGGATTTCTATGTCATCTATGGGCATCTTTTAATCATCCATGGACG
AAAAGCAACACCTGAAAGATTATTCACACCATCGTAAACTATCCCTATTT
ACATACACTAATATACCTTTGCTGATATGCCTTTACTATATTACAGGGCC
CAGTCTGTGACTACCAGTTGGCTTGTCTGCGATTCAAGAAATCTTTGGGA
ATACCCGGCAAGTACTTTTTGTTTCCAAATCCCAACTTTTGTAACAAACC
AAATCCGTGTGTTTGTATGTATGTGTGTGTGTGGGGGGGGGCGTATATTT
ATGTATATGTTTGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAATAACANNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNTATATATATATATATATATGGGATGTATATGTGTATGTA
TGTGTGTGTGTGTGTGTGTGCGCGCGCGCGTGTTTGTGTGTGTGTGTGTG
TGCGTGTGCGTGTGTGTGTGTGTGTGCGTGTGTGTGTGTTTGTGTGTATG
GGTGTGTGGGTGTGTGTGGGGGGGGGTGTGTATGTGTATGTGTGTGTGTG
TGTATGCGTGCATATGTAATAACAACAAGAAGTATGCTGTCTTTTTTCTA
CACCATTTAAGTCCTAACTTTTCTATATTACAGAGAGCTACTTCTCCCAT
GAGCAGGACAAATGTTTCTGTGAGACATGTCACAAGGCCCGGGGGGACGA
CGACTATTACACGCGGGGGGAACCGAAGAAGAAGTACGCGGTGCCTGTTG
GATGGACCAGATTTGGTCTCAGGTGAGAACATGTGTCTTATATATGACAT
CATGTTGTTTGATGATGAGCGCTACAACCCGCGGCAGCATGTAATTCTAC
TACATCTCCTCTTTTACAGCTTAAACCCAACCTTCAAGGACAGTGAGCTG
AATGTGTTCGACAACTGGCACCGTGCGTACCACGGGACAGACCCCGGTGT
GGTGAAGAAAATTCTACAGAACAGCTCACAACTGCTTATGGCAGGTACAT
AACCATTTTCAATAGGAAATTTCAATATTCCCGAACAAAGTAGATATCTA
CCAGCCTTAGTGTCATCCTGTTTCAGTTCCAGGCTCTACCCTCACAGAAC
AGTCTGAGATCGCTGCCATTCAAGTCGTCTGGAATAACTATTCGGCCAGA
TTGTGGCCGAGTACGCTGATTGGTCCCTTTTAGATCTGTCAGTGCTCCAC
ATGGAAGCCTTGTTCTTGCCAATCTGGCCGAATACAGTTTTTCCAGACTA
TTTGAATGGCAGCGATCTCAGACTGTTCCGTAAGGGCAGAGCCTGGAACT
AAACAGGGTGACACTCAGGCTAGATATCTACGTATACGATAGAATTATGA
TACCGTTTAGTTAGAAATGTAGGACAATATCAAATTGTTGATAAACGTTT
TTAAAATTACTTGACGCTGTATATTGTCTTGCATATACTTAATAGGAGAC
GTAGCTTTGGGTGGACGCAAATTAGGAGAGAGGGAAGGCCATTTCAACCC
TGATAGGAAACCGGAAGGATTCGACACCACGCAATTGTTCGTAACACCAA
GCATCGTGTACGCTGGATTGGATGCCTATGCCAGTCCCAAAAAGTAAGGA
GAAAGATACTCACTCCACATTCACTGTTCTTGTAATAAAGGCCATGCAAA
CAAAGCCATGCGTATTTGTTGGGAACATTTGTAATGTGTAAATGCAAATG
TTTTAAATGTCCAGGACCAAGACTGGAATTCTCTCAGCTACCTAAAAGAT
TAAATTTGACAATACCACATATCTTTGAACAGGTTCGAAGCTGACGGGAA
GAAATACAAAGCTCGTGTCGCCTTCCAGTTGTGTATCCGGCCCGACAGTT
ATAAGGTTGGACCGGAAACCGTGGGGGCCAGAGGGAAGGGCATAACCATC
GACCCACTCTTCAAAAACGAAGAGCTGGAATGGTCCACTAAGGAAAGAGG
AGGGACCGCTCTCTACGGCCTGCTTGTCAAGTTAGAACCCTTTGTTGAGG
ATTCAGATGACGTTGGTGTTGATGAATTACGTGCTAAATTGAGACTTCTC
GAAATGCTCTTTCTATTAGGCGCTCTGGGCACTCTAGACGATGATGATGA
CGATGATAAGTAGGTGGAATCTAATTTGAATCGCCATTATGATACGCATG
TGCACATTGTAAAGTTCACATACAGTAGAGGAAACCTTGTAAATAACAGT
TTCATATATTCAACTTACAGTAAGTTCTCAAGAAAAAAATGGCACTGTAC
AGTTATCGAACTAGTACTTCTATATTCTTATATGCCATAGAGCTGATATC
AACATTGAGCTGTTTATTTGACATCGGTAAATAGGATTGATATTGGTGAC
ACCGACTCTCTGATCAAAGTGAAAATACCTTTGTAGTGCCGCTTAGAAGC
GAAGTCAATAACATCTCTGTCCATTCCAGGTTTGTTTGTTTTTTTGCAGA
ACAAGAAAATAAATGATACAATAAACAATAGTTAAAAACAAGTGCAGTAG
GAGGGTTGATAGCTTATACTACGCCCTCCTCCTAGTAATGAAAATTGATT
ATAATCAATAAACAACAGCAAAGTAAATACATGAAATATGATATTCAAAG
TTAATTGCAATCATATGCCCGTGGGCTAATTGCAAGGACAAACAACATGA
ATAATGATGAAAAATACAATGATATCAAGAGCTACATCTAATGTTATGCT
ACGATACATACAATACATGTAATAGTTGTGTACAAGTGAATTAGGAAATT
ATCAAATACATGTGTATTGGGGAGCTTGTTAGAAAGGAAGTCAAATGTAA
AGATACTTATTTGCTTTTGATGACCAGTTTTATATGTGTTTCCTTTGCTG
ATTTAACCTTAACATTCTAATTCTGAATAATGTGTATTTGCAGTTTTACA
AAGTCTAGAATAATGATCTTTGTGCCAGATAAGGCAAAATGTTACTATAC
AAAGTTCCAGTACAAGGATATGGTTTTTGTAGGCGCATTATGCCACCATA
TGCTGACGATAATCCAAAGGGACATGCCAAAGCCATTCGAGAATTCGTAC
TCAGATCAAAGACTAATAATATTGGTACAAAAATACAATCATTTGTTACA
TTTATTTCATTGTATTATGTGTGTAAAAGTTTGTATCCACGCATCCTAAC
ATATGCCATGCTTGGTATCTGCAACCCTTAAGGAAGATCTTTCACGGAAT
GACTAAAAAATGTCATTACTTCTCCTTAGGCTAAAATCGACGTTCCATTT
TAAGCAACCAGTGTAATCAATTTCTAGTTGAATTGATTACAAAACCCAAC
TAACAGAAACAACAAACTTCAGTAAAATATTACCTCCTTACCAGAGCAGA
GGTCAACAAACAAGCTAAAATTGTATACACATCGAGGGCAAAAGCTAACC
TATTTGAACACAATAAGATATTCTGGATATGCTCCCGTGTCATAAAACAC
AACAAAAATTGTTGGATTTTGCTCATTATCCACGACAGAATCGTATCGAA
CTGCAGCATTTGCTGGATTCTTTGGCGGTGGTTCAATGATGCCAGTCTTT
CCAGTCGTGTATTCTCCAACGATGACTCTGGCTTGATAGATGTGTTTG Coding sequence (CDS) from alignment at Sc0000003:5727745..5733742- >Blg00939.1 ID=Blg00939.1|Name=Blg00939.1|organism=Branchiostoma lanceolatum|type=CDS|length=1248bp|location=Sequence derived from alignment at Sc0000003:5727745..5733742- (Branchiostoma lanceolatum)
ATGCCCGACCTCCTCCATCTGTACGGGATGTGCTGTACTGCCGTGATCCT
GACCTTCTACTACGATCAACACCTAGAGCCTGTACCTGACATCGAACAGT
ACATGAAACCGTTTTGGCCCCTCCTGTTGGCTGATTTGCTGGGAATCACC
GGCATTCTACTGAGGCTTTGCAGTCACTGTTGTTCGACACCCAATAGGCC
AGATGCACCGGCAGCTGCAGTTCCGATCAGATTTGGCCAACTAAAGGGCA
TCGCCGGGTCACCGCCTTATCACCTGGAGCCGCTTCCAAGTTCCAGTCAC
ATGACAGCCGCTCCCACTGTCTCAACATATACCAAGCTACCACCTATAGG
ACAAGGACAACGACTGGATCAAATGCATCTCGTCGGAGAGGGTGATGCAC
AAGCCCTCGGAACCAGTGCCGCAAGGACATCAGTAACGACAAAGGGCCCA
GTCTGTGACTACCAGTTGGCTTGTCTGCGATTCAAGAAATCTTTGGGAAT
ACCCGAGAGCTACTTCTCCCATGAGCAGGACAAATGTTTCTGTGAGACAT
GTCACAAGGCCCGGGGGGACGACGACTATTACACGCGGGGGGAACCGAAG
AAGAAGTACGCGGTGCCTGTTGGATGGACCAGATTTGGTCTCAGCTTAAA
CCCAACCTTCAAGGACAGTGAGCTGAATGTGTTCGACAACTGGCACCGTG
CGTACCACGGGACAGACCCCGGTGTGGTGAAGAAAATTCTACAGAACAGC
TCACAACTGCTTATGGCAGGAGACGTAGCTTTGGGTGGACGCAAATTAGG
AGAGAGGGAAGGCCATTTCAACCCTGATAGGAAACCGGAAGGATTCGACA
CCACGCAATTGTTCGTAACACCAAGCATCGTGTACGCTGGATTGGATGCC
TATGCCAGTCCCAAAAAGTTCGAAGCTGACGGGAAGAAATACAAAGCTCG
TGTCGCCTTCCAGTTGTGTATCCGGCCCGACAGTTATAAGGTTGGACCGG
AAACCGTGGGGGCCAGAGGGAAGGGCATAACCATCGACCCACTCTTCAAA
AACGAAGAGCTGGAATGGTCCACTAAGGAAAGAGGAGGGACCGCTCTCTA
CGGCCTGCTTGTCAAGTTAGAACCCTTTGTTGAGGATTCAGATGACGTTG
GTGTTGATGAATTACGTGCTAAATTGAGACTTCTCGAAATGCTCTTTCTA
TTAGGCGCTCTGGGCACTCTAGACGATGATGATGACGATGATAAGTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| Blg00939.1-exon-Sc0000003-1570713199:5733261..5733742 | Blg00939.1-exon-Sc0000003-1570713199:5733261..5733742 | Branchiostoma lanceolatum | exon |
| Blg00939.1-exon-Sc0000003-1570713199:5732886..5732967 | Blg00939.1-exon-Sc0000003-1570713199:5732886..5732967 | Branchiostoma lanceolatum | exon |
| Blg00939.1-exon-Sc0000003-1570713199:5732500..5732598 | Blg00939.1-exon-Sc0000003-1570713199:5732500..5732598 | Branchiostoma lanceolatum | exon |
| Blg00939.1-exon-Sc0000003-1570713199:5732100..5732176 | Blg00939.1-exon-Sc0000003-1570713199:5732100..5732176 | Branchiostoma lanceolatum | exon |
| Blg00939.1-exon-Sc0000003-1570713199:5731586..5731646 | Blg00939.1-exon-Sc0000003-1570713199:5731586..5731646 | Branchiostoma lanceolatum | exon |
| Blg00939.1-exon-Sc0000003-1570713199:5730571..5730709 | Blg00939.1-exon-Sc0000003-1570713199:5730571..5730709 | Branchiostoma lanceolatum | exon |
| Blg00939.1-exon-Sc0000003-1570713199:5730349..5730473 | Blg00939.1-exon-Sc0000003-1570713199:5730349..5730473 | Branchiostoma lanceolatum | exon |
| Blg00939.1-exon-Sc0000003-1570713199:5729750..5729897 | Blg00939.1-exon-Sc0000003-1570713199:5729750..5729897 | Branchiostoma lanceolatum | exon |
| Blg00939.1-exon-Sc0000003-1570713199:5727745..5729560 | Blg00939.1-exon-Sc0000003-1570713199:5727745..5729560 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000003 | genome | Sc0000003:5727745..5733742 - |
Properties
| Property Name | Value |
|---|
| GeneID | Blg00939 |
|
