Blg00859.0 (mRNA) - B. lanceolatum

Overview
NameBlg00859.0
Unique NameBlg00859.0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000003:27640..29587-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Blg00859.0 ID=Blg00859.0|Name=Blg00859.0|organism=Branchiostoma lanceolatum|type=mRNA|length=1948bp|location=Sequence derived from alignment at Sc0000003:27640..29587- (Branchiostoma lanceolatum)
ATGACACCCCTTCTGGTAACGGTGAGTAGGAGTGCGGATTTCGTACCCTT
AGATTTTTTGAAGTTAGCTTCGCCGAGCGACTTTCGCGCAAGGGACGACG
GGAGGCCGATGGGTATTTGCATAACTACCGACCGGGAGAGTCTAACGCAA
CTGCTCAGCGGGGAAGAAAACTCGCTATTGTTTATTGAGTCCGCGGAGCT
GAGGCCAAATGCCCATGGTTGTAATGGGATGGCACCAAGGCTAGCTTCTG
GGTTTGTCCTAAAATAAAGTTGAACTGTAGTTGTGTTTAGCGAATATTTT
GGATGTAACTTGTGTTTTGCAAGGATGTTGAAATGTTTTTTGATGTCTGT
TCTAGCGAGGACTTGAGCGGGATCGGACTTCGTTGGAGCGAGAAGAGAAG
AAGTTGGAGATGGAAATTAAAAAGGCAGCGAAGCAGGGAAACAAGCAGGC
GGCAACGGTCCTGGCAAAACAGCTGGTCGCTCTCAGGAAACAGAAGGTAG
GACACAAAGAAACAAACAAACACACAAATAAACAAGCAAACACACAAAGA
AACAAACAAACACGCACCTTATTGCAATTGTGAGCTTGGCTTTTCTTAAT
GTCTGTTTTATTTTCATTCAGTAATTGATATACTAGTACCAATGGTAAGT
GTAAGGCTGGAATAGAAGTGTTTAGGTGTAACATGTGACAGCAAGGGAAC
ATCTAACGAAACACTGCCGCACACAAACTGTGATCGTGTTGTTCTCTGGC
AGACGCGGTCGTACGCCGCGAGCTCGCAGGTCCAGTCCGTCGGCATCCAG
GCGAAAACGATGCAGTCCACGGTAAAGATGGCGGGCGCGATGGAACGTAC
CAGTAAAACCATGGGGGCCGTCAACAAGCAGATGAACCCGCAGAAAATGG
CCAAAACCATGCAGGTAAATAACGGCTGATTGGTCCATGTTTCTCTCTGT
GATTGGTTGGTGTTTGAGCAAGGCTGTCTTTGATTGGTTGGTGTTTGAGT
AAGGCTGTTTGTGATTGGTTGATGTTCGAGTAAGGCTGCCTGTGATTGGT
TGATGTTAATGTAAGGCTGTCGTGATTGATAGATGTTTGTGTAAGACTGT
CTGTGATTGGTAGATATTTGTGTTAGACTGTCTGTGATTGGTTGTTGTTT
GTGTAACACTCTCTGTGTATTATTGGTTGATGTTTGTGTAAGACTGTCTG
TGATTGGCTGCAGGATTTCTCGCGGGAGAACGCGAAGATGGAGATGACAG
ATGAGATGATCAGCGACACGCTCGACGACATTTTCGACGAATCAGGAGAC
GAGGAAGAACAGGACGCCATCGTTACCCAGGTAACCACTCCCCCTTACAG
TCAGTACATAGTACGGTCCTACGGCCCCCTAGTGTACATGGTACGGTCCT
AAGGCCCCCTAGTGTACATGGTACGGTCCAATGGCCCCTATTGTACATTC
CACCCGCTACTACACATGGTAGGGTCCAACACTGTGTTACTACAAGTTAA
GTCTGTAATGAAGCTCCACCTGACAGACCTGGCTGGTACTGCAGCACCTT
GTCCCTGTATGACCATAATGCATGTATGAAACAGTAAGTTATGGAGACCA
GGCAGGATTTTTCTTTCCTTTTGTGATAGATACACACAAACCTGCAAGTT
GTTTACCTGAACATTTAACCGTCTTTCAGAATGTCAATCGCTGAATGAAA
CTCCTGCTATGACCGATGTCTGAGTTGTGCCTTTGTGCAGGTGTTTGTTT
ATTTGTGCAGGTGTTTGTTTATTGATCTATCTATTTGTTTGCTTGTTTAC
TGCCCAGGTGTTGGATGAGATCGGAATCGAGATGTCCGGAAAGCTTGCGG
AGGCTCCGGCCGCCGGGCGTGGGAAAATCGGAGCCGCGGCGTCGAACGTT
CCGACTGACGACGAGATCGAGAGACAACTGGCACAGCTACGTACATAG

Coding sequence (CDS) from alignment at Sc0000003:27640..29587-

>Blg00859.0 ID=Blg00859.0|Name=Blg00859.0|organism=Branchiostoma lanceolatum|type=CDS|length=582bp|location=Sequence derived from alignment at Sc0000003:27640..29587- (Branchiostoma lanceolatum)
ATGACACCCCTTCTGGTAACGCGAGGACTTGAGCGGGATCGGACTTCGTT
GGAGCGAGAAGAGAAGAAGTTGGAGATGGAAATTAAAAAGGCAGCGAAGC
AGGGAAACAAGCAGGCGGCAACGGTCCTGGCAAAACAGCTGGTCGCTCTC
AGGAAACAGAAGACGCGGTCGTACGCCGCGAGCTCGCAGGTCCAGTCCGT
CGGCATCCAGGCGAAAACGATGCAGTCCACGGTAAAGATGGCGGGCGCGA
TGGAACGTACCAGTAAAACCATGGGGGCCGTCAACAAGCAGATGAACCCG
CAGAAAATGGCCAAAACCATGCAGGATTTCTCGCGGGAGAACGCGAAGAT
GGAGATGACAGATGAGATGATCAGCGACACGCTCGACGACATTTTCGACG
AATCAGGAGACGAGGAAGAACAGGACGCCATCGTTACCCAGGTGTTGGAT
GAGATCGGAATCGAGATGTCCGGAAAGCTTGCGGAGGCTCCGGCCGCCGG
GCGTGGGAAAATCGGAGCCGCGGCGTCGAACGTTCCGACTGACGACGAGA
TCGAGAGACAACTGGCACAGCTACGTACATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
Blg00859.0Blg00859.0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
Blg00859.0-exon-Sc0000003-1570713199:29567..29587Blg00859.0-exon-Sc0000003-1570713199:29567..29587Branchiostoma lanceolatumexon
Blg00859.0-exon-Sc0000003-1570713199:29092..29232Blg00859.0-exon-Sc0000003-1570713199:29092..29232Branchiostoma lanceolatumexon
Blg00859.0-exon-Sc0000003-1570713199:28674..28835Blg00859.0-exon-Sc0000003-1570713199:28674..28835Branchiostoma lanceolatumexon
Blg00859.0-exon-Sc0000003-1570713199:28258..28374Blg00859.0-exon-Sc0000003-1570713199:28258..28374Branchiostoma lanceolatumexon
Blg00859.0-exon-Sc0000003-1570713199:27640..27780Blg00859.0-exon-Sc0000003-1570713199:27640..27780Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000003genomeSc0000003:27640..29587 -
Properties
Property NameValue
GeneIDBlg00859