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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000105:373576..379257+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00086229 ID=BlTCONS00086229|Name=BlTCONS00086229|organism=Branchiostoma lanceolatum|type=mRNA|length=5682bp|location=Sequence derived from alignment at Sc0000105:373576..379257+ (Branchiostoma lanceolatum)
CTTCGAACACCGCCCCTGGCGCGAATGAAACCCTATGGCGGCTAGACTCT
CGGCTTGGCAGCGTAGTTAATCTGGTAGAGACTACAATATTTGGTGGAAT
TTTTAATGTCTATGTACTTTCTTTTGTCTGTTGTATATTTACAATGCAAC
GATCATCCCAGGTCAATACGTAGTTGAATATACCCCCATTTGGTTACATT
TGCTGCTCTTCTGGCGACATAAAATAACGCAACGTCTGTATTGATGTTTT
ACGTTGTGTTTTGCAAGCAGAAATGAAGATTTCCGTTCGTCTCATGATGG
TCTTCATAGCTGTGCGGCTCACCTCTGCCACAAATACAGGTAGAATGAAA
AAAATTCTGATCAAGATATCTCTTACTGTCATCATTTAACATGAGCTGAA
TAAGACTGGATCATCAGCCATCTTTTAGTATCTTCCCAAAATGTACATTT
TTGAATAAGTATAGATATAGGCAAGATAACAGTATACTTAAGAAACTGGA
TAGATCTGTAACGGTCAGACTTTTAGGTAGCGCCCACTAACTTTCCGGGC
CCTACCACCCCTGAGAAACAACATTAGCTCCTATACACAAACAACAGCTA
ACTGACGAATATGCATCATATCAACATTGACTTGTCTTTGTCTTAATTTT
GTTTCCATTGGACTGAATAACATTACTATATTTAAATATCAATCCATAGC
GTTTATTAGATACCTGTTCCCTCCCAGTCCTTCTCAGTCACTGGCAGTAT
CACACGTAGGTAGTTGATGCTACCTGAAACGTCTGACCGTTTACAATTAA
TCAATTATATAAATCTATCCAGTTGCTTGAGTAACTATCATCTCGCTAAT
ATTACTGCCTGGATGTCTAACCTTCATCGATGTATAGATACATGTATACA
CTCTTAAGCTCAGACGCAAGGGGGTGAAATACCAGGCGTCATGGTTGCCA
TGGGACCGGAGGGTCTGAAGGGGGAGAAGCGAGTACTTGCGGAGGGGCTG
GCTTCACAGGAGGAGTGCGACATGATGCTCGACTTGGCTCAGGTGAGCAT
ACGAGATATGCAATAGTTTCGAGCGGTGTCATACATTGTTGCCGATGTCT
GTGTCTGCATGGAGCGTAACAGGGCCAACCTGTACTCAAATAAAAACTTT
TAAAAATCGCCGGGGGGTCCCTTACTTGTAATGGCTGACGCTTCGCTTTC
ATGTACACGGATCAGGATGTTAACTGCGGCCAACCACGCCCATCCTAAAA
AAAAAATCAATATGTCACCTATTTGACTCGGGCAGTTTACCGTGCATGCC
ATACATAAATACATAGAAACAAACAAAGAAATAAACAGACTCGCGTGTAT
GTGTCCTCAGACGGCTGTCACGACCCTGGATGGCGGACGACTCTTTGCTT
TCACAGACTACGAGACGTATGAGGGGCTGACCGTTTTACATGCAGCGATG
GTAGGTTCAACTAGTCTCCTCCAGGCTTCTTCGGGTGCTAGATAGATAGT
TTATTAAAAAGCTGAATGAATGCGACGGTACTAGCGCAGAAGGAAATTGG
TATTTATGCAGTAATGCACTTGACTTGAATGCTGGCAAATGTAAGTGAAC
ATTTGGGGGAACGTAAAACAGTGAGGCGGCGAAAATAAGGAAGCTTAGGC
CTGGCAAAAGAATGTTTTGTTTCAGGATACGGCTTTAAAAGATAGGGTTA
ATTATGAATATTGATTGTGGCCTAGCCTGTCAAGTTTTGTGTATGTATTC
GTATATGTATATGTTATTTGTTACATTTCATAGTATGTATTCATGTTGTA
TGTATTATTATCACTATTATAATGGTATATGTATGATTATTATCATTATT
ACTTTATTATTATGATTTCCAGGACCCATCGAAAAGCAGTGACATGCCAC
TGAGATGGTCGCCCTGGTTAAATAAAAGAGAAATAAGTAGATAAATAGCA
TTATGTGTGCCATTTGCAGCTCGCCCAGCAAGGTGTAGTCTCGGTTGACT
CAGCCGACAAGTTCCTCACTCTGAGTGAAAAGGCACGTCGGTTCGTGCAC
GACTACTTCGGCCTGCAGCAGGAGCTGTTCCTTGACCTTACCCACCTCGT
CTGTAGGACAGCCGTGCCTGGTATGATATCACCTTAATATGCAACACCGC
GAATCAAATTATTACCTTCGCCAAGAAGGCTATGTTTTCGGTAACGTTTG
TGTGTGTGTCCCGTTGTCCGGCAAATGAAGACCTAATTTGCATAATTAAG
GACAGAATACTATAATTCTATACCGGTAAATGATGGCAATTTAATACTTG
TGGCATTTGGAGGTTATGTAAAGGTGAACATCATTGAATGTAAATTATGT
AAATGAGGACCTTATTTGCATTATCAATGAGAAACACTACAAAATGATAA
ACTAGTCATGAAGGTAAACATTTGGCTGGTCTGAGGTCGTGGAACTCCTG
AAGAATTAAACTGTTATCCAACAACAAAATGTTCTCACGAAATGTTCAAC
TGGTTCCCCCAGTCTTCCTCAGCTTTCCGGCCCAATCGCTCTGGACACGT
GAGTTTTATTCGCGTGTGACGTCAGCAATGGGTCATCATACATTTGTAAG
ACAATCAATCAACAAAGTCACAAAGCACCATCCAGCAAGGAATATGAAAT
ATACAACTGTAGCAGGAATGTATACATAGTTTACATACATACAACAGAAA
TGTCCCAAAGAACGTCAAATACATACGAGTTTTTGAACGCCGTCATCGTG
GTCACATGACCTAGCCCAACCAACCAACCAACCAACCAACCAACCAACCA
CACTGTCCATTTAAGTCACCTGACCTAGCTCAGCCAATCACCCTGATTTG
CTAAGGGCACATCCCTTTTGTTCACCTTTGCCTATGTCGGCTGCAGCATT
CGCAGGCGGAAGGCCTCGGACGGACCCGAGCCACGACGTACATGTAGACA
ACTGCGAGCTGTCCTCGCCAGGCCAAGACTGGTACTGTAAGTACCAAACT
CTCTTCAACCAACGGGACTACAGGTTTGTTTGTTTGTTTGTTTGTTTGTT
TTATTGCGATCTCTCTTCGTCATTTCCATCGCCATTCTGCCACTGAGAGC
CTTGTAACTTGAAATTAGAATGCATGCGCAAGTTTCACAAGTTAATCTTC
GATTCTCTGATTAGAATACCCGAACATTATACTAACTTCTTTCTGTGCCT
TTGTTGGATTTCTAGTGCCATCATGTTCCTAAATGATGATTTTGAAGGAG
GAGAGTTCTTCTTTGCGGACAGAAATCGTACTGCACAGGTAAGACGGTTA
CCCATGATGATGATGATGATGATGATGATGNGTATGTATTATTATCACTA
TTATAATGGTATATGTATGATTATTATCATTATTACTTTATTATTATGAT
TTCCAGGACCCATCGAAAAGCAGTGACATGCCACTGAGATGGTCGCCCTG
GTTAAATAAAAGAGAAATAAATAGATAAATAGCATTATGTGTGCCATTTG
CAGCTCGCCCAGCAAGGTGTAGTCTCGGTTGACTCAGCCGACAAGTTCCT
CACTCTGAGTGAAAAAGCACGTCGGTTCGTGCACGACTACTTCGGCCTGC
AGCAGGAGCTGTTCCTTGACCTTACCCACCTCGTCTGTAGGACAGCCGTG
CCTGGTATGATATCACCTTAATATGCAACACCGCGAATCAAATTATTACC
TTCGCCAAGAAGGCTATGTTTTCGGTAACGTTTGTGTGTGTGTCCCGTTG
TCCGGCAAATGAAGACCTAATTTGCATAATTAAGGACAGAATACTATAAT
TCTATACCGGTAAATGATGGCAATTTAATACTTGTGGCATTTGGAGGTTA
TGTAAAGGTGAACATCATTGAATGTAAATTATGTAAATGAGGACCTTATT
TGCATTATCAATGAGAAACACTACAAAATGATAAACTAGTCATGAAGGTA
AACATTTGGCTGGTCTGAGGTCGTGGAACTCCTGAAGAATTAAACTGTTA
TCCAACAACAAAATGTTCTCACGAAATGTTCAACTGGTTCCCCCAGTCTT
CCTCAGCTTTCCGGCCCAATCGCTCTGGACACGTGAGTTTTATTCGCGTG
TGACGTCAGCAATGGGTCATCATACATTTGTAAGACAATCAATCAACAAA
GTCACAAAGCACCATCCAGCAAGGAATATGAAATATACAACTGTAGCAGG
AATGTATACATAGTTTACATACATACAACAGAAATGTCCCAAAGAACGTC
AAATACATACGAGTTTTTGAACGCCGTCATCGTGGTCACATGACCTAGCC
CAACCAACCAACCAACCAACCAACCAACCAACCACACTGTCCATTTAAGT
CACCTGACCTAGCTCAGCCAATCACCCTGATTTGCTAAGGGCACATCCCT
TTTGTTCACCTTTGCCTATGTCGGCTGCAGCATTCGCAGGCGGAAGGCCT
CGGACGGACCCGAGCCACGACGTACATGTAGACAACTGCGAGCTGTCCTC
GCCAGGCCAAGACTGGTACTGTAAGTACCAAACTCTCTTCAACCAACGGG
ACTACAGGTTTGTTTGTTTGTTTGTTTGTTTGTTTTATTGCGATCTCTCT
TCGTCATTTCCATCGCCATTCTGCCACTGAGAGCCTTGTAACTTGAAATT
AGAATGCATGCGCAAGTTTCACAAGTTAATCTTCGATTCTCTGATTAGAA
TACCCGAACATTATACTAACTTCTTTCTGTGCCTTTGTTGGATTTCTAGT
GCCATCATGTTCCTAAATGATGATTTTGAAGGAGGAGAGTTCTTCTTTGC
GGACAGAAATCGTACTGCACAGGTAAGACGGTTACCCATGATGATGATGA
TGATGATGATGATGTTGATGATGATGATGATTTTGAGGTATCTTATTCAT
TGTCTGGAAACGTAGAGCTTGTCGTAAATTCTAAAACTGTGGCCACAAGT
GTCTTTATCTTACATGTTTATGTTACATTTCTCTTCACTTCTTCGAATTG
AAATTAGTTAGTCATGAATTTCAGGCACTAATGAATTACAAATATATTTC
TCATTTGCATCTATTCACCGAACATCCATGCAATAAAGTCAATGTTAAGT
TAATGATATGCCATCCTTAAGAACATGTCAGTAAGTTATAGTCTGTCTTA
ACAGGATCTTACTTTCGTGATGTATGTATGTACGTTTCAATAGAGGTAAC
GTTAACTGTATGTCCATATTATGCACACCGCCAGTACGGTTCTGTACTCC
ACATTTAAGAACAGGAGGAACGTGAAGTCTTTCCTTTCTTACCCATCCAG
GCGACAGTTCAGCCCAAGTGCGGCAGGCTTGTGGCGTTTTCCTCGGGCCC
GGAGAACCCTCACGGCGTGCAGGCCGTGCTGCAGGGCAGGCGGTGTGTCC
TCGCCATGTGGTACACGCTGGACAAACAGCACGACGAGTGGCCCCGCTAC
AAAGCCCGTGAAATAGTGGACTCCTTACTGAAGCCTGAGGGAGACCAACG
CAACGAAAAACTGGAGAACGAACTGTAGTTCTTTGCTGAATATTGGAGAC
TTGCGTCTTGTAATTGTGTGGACGGCTGGGCCGACTATGACGAATTAAAA
GAATCATTGATTCATTCAATCGCTCAAGTGTTCGCTCATTGGCTCACTGA
CTCACTGACTCACTCACTCACTCACTCACTTA Coding sequence (CDS) from alignment at Sc0000105:373576..379257+ >BlTCONS00086229 ID=BlTCONS00086229|Name=BlTCONS00086229|organism=Branchiostoma lanceolatum|type=CDS|length=870bp|location=Sequence derived from alignment at Sc0000105:373576..379257+ (Branchiostoma lanceolatum)
ATGAAGATTTCCGTTCGTCTCATGATGGTCTTCATAGCTGTGCGGCTCAC
CTCTGCCACAAATACAGCTCAGACGCAAGGGGGTGAAATACCAGGCGTCA
TGGTTGCCATGGGACCGGAGGGTCTGAAGGGGGAGAAGCGAGTACTTGCG
GAGGGGCTGGCTTCACAGGAGGAGTGCGACATGATGCTCGACTTGGCTCA
GACGGCTGTCACGACCCTGGATGGCGGACGACTCTTTGCTTTCACAGACT
ACGAGACGTATGAGGGGCTGACCGTTTTACATGCAGCGATGCTCGCCCAG
CAAGGTGTAGTCTCGGTTGACTCAGCCGACAAGTTCCTCACTCTGAGTGA
AAAGGCACGTCGGTTCGTGCACGACTACTTCGGCCTGCAGCAGGAGCTGT
TCCTTGACCTTACCCACCTCGTCTGTAGGACAGCCGTGCCTGCATTCGCA
GGCGGAAGGCCTCGGACGGACCCGAGCCACGACGTACATGTAGACAACTG
CGAGCTGTCCTCGCCAGGCCAAGACTGGTACTGTAAGTACCAAACTCTCT
TCAACCAACGGGACTACAGTGCCATCATGTTCCTAAATGATGATTTTGAA
GGAGGAGAGTTCTTCTTTGCGGACAGAAATCGTACTGCACAGGCGACAGT
TCAGCCCAAGTGCGGCAGGCTTGTGGCGTTTTCCTCGGGCCCGGAGAACC
CTCACGGCGTGCAGGCCGTGCTGCAGGGCAGGCGGTGTGTCCTCGCCATG
TGGTACACGCTGGACAAACAGCACGACGAGTGGCCCCGCTACAAAGCCCG
TGAAATAGTGGACTCCTTACTGAAGCCTGAGGGAGACCAACGCAACGAAA
AACTGGAGAACGAACTGTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00086229-exon-Sc0000105-1564993656:373576..373914 | BlTCONS00086229-exon-Sc0000105-1564993656:373576..373914 | Branchiostoma lanceolatum | exon |
| BlTCONS00086229-exon-Sc0000105-1564993656:374484..374617 | BlTCONS00086229-exon-Sc0000105-1564993656:374484..374617 | Branchiostoma lanceolatum | exon |
| BlTCONS00086229-exon-Sc0000105-1564993656:374936..375025 | BlTCONS00086229-exon-Sc0000105-1564993656:374936..375025 | Branchiostoma lanceolatum | exon |
| BlTCONS00086229-exon-Sc0000105-1564993656:375545..375695 | BlTCONS00086229-exon-Sc0000105-1564993656:375545..375695 | Branchiostoma lanceolatum | exon |
| BlTCONS00086229-exon-Sc0000105-1564993656:376472..376598 | BlTCONS00086229-exon-Sc0000105-1564993656:376472..376598 | Branchiostoma lanceolatum | exon |
| BlTCONS00086229-exon-Sc0000105-1564993656:376791..376863 | BlTCONS00086229-exon-Sc0000105-1564993656:376791..376863 | Branchiostoma lanceolatum | exon |
| BlTCONS00086229-exon-Sc0000105-1564993656:378876..379257 | BlTCONS00086229-exon-Sc0000105-1564993656:378876..379257 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000105 | genome | Sc0000105:373576..379257 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF042026 |
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