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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000052:642785..649088- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00064081 ID=BlTCONS00064081|Name=BlTCONS00064081|organism=Branchiostoma lanceolatum|type=mRNA|length=6304bp|location=Sequence derived from alignment at Sc0000052:642785..649088- (Branchiostoma lanceolatum)
CGGTACTGGGCAGGAACACCATCAAGAAGGGACGGTAAGGAGATTTCTAA
GGAGCTTTCTAACCTACTCCAGAAAACTCACCTACCTTGGGTGCTGTCTA
CCTATTGTGATAGTGCAAGGACAATTTGAAAACAGATCCATCCCTGAATC
CCCCTCTAATCAATGGTTTTGTCTTAAATGCTTTTTAATTTTCCACTTAC
CCATGCAGGTTTCCATTTCCCTGTGACAGGCACTTACACACAACGACAGA
CCAATTGTTAATGTCAAATGTATATGATTATGCAAGAAAAGTTATAGATA
AAGATGAAAATATATAAATTCAGAACATCTTGTCATTATCAGGGTATTAC
ATAATTAGTAAGTACCTACTAGTTGATCCTCACTATTTCCATTTTCTAAA
CCCCACAGCTACATCAAGATCGGAGACAAGGAGTGCGAGTACAACCCTAA
CTTCCGGCTGATCCTGCACACCAAGCTAGCCAACCCGCACTACAAGCCGG
AGATGCAGGCCCAGTCCACCCTCATCAACTTCACCGTCACCCGGGACGGC
CTGGAGGACCAGCTGCTGGCCGAGGTTGTCAGGTGCGAGAGGCCCGATCT
GGAGACCCTCAAGGTACAAACTTGGTGAAAATGGGTAACTGATTTTGGTT
GGGGAGGTAAAGGCAGTGGAATTGGCATGGGCTGTACCCTCTAATACCGT
GCCGTAGACACAGTGGACATTAACAACCCAATTTTACCTGATTGTGTTGA
GTGTTGTAAATTTTCAAGAATTTTGGCATGCGGCCTTGAGTCTAACGTCT
TTCTCTCCCCCCCTCCTCACAGAGCGAGCTGACTCGTCAGCAGAACGAGT
TTAAGATCGTGCTGTAAATCTTTAAGAATTTCGGCATGCGGCCTTGAGTC
TGACGTCTTTCTCTCCCCCCTCCCCACAGAGCGAGCTGACTCGTCAGCAG
AACGAGTTTAAGATCGTGCTGTAAATCTTTAAGAATTTCGGCATGCGGCC
TTGAGTCTGACGTCTTTCTCTCCCCCCTCCCCACAGAGCGAGCTGACTCG
TCAGCAGAACGAGTTTAAGATTGTGCTGAAGGGGCTGGAAGACAACCTGT
TGTCCCGCCTCTCCTCTGCTGAGGGCAACTTCCTCGGAGACACCGCGCTG
GTCGAGAACCTCGAGACGACCAAGCGTACGGCCGCCGAGATCGAGGTTAA
GGTGGGTAGAAAACGTCTTGAGTGCTGTTAATAAAACCTTAAGATACTCT
TTGTACACAACCACACTACTCCTTGAATCATCCTATGTAGTAGAACTTAC
GAAAGTCGCATGTATGTAATGTAATAGACCTTACGAAAGTCGCTGTGCTT
TTGTTGTGTCAATAAAGATCAGTAATTGTGATGTTAGAACAACTGACTGT
GACCCCCAGCAGAACTCAGGTATCCAATGGTTGCCTGCGAGGCTGTTGTT
TGTTTTTATGTAAATATTAAAGAAACCATTCGTTGCATTTCCGAAAATAA
TTTCATCAGGTTGGTAGAATATAGGGTATGGGAAATTCTTTTTACACAAC
CAGGTAATCTCACCTGCTAACGTTTCGGTGTTGGTCAGACACCTTCATCA
GAGCTTCTGACTGGAGTACTGCTTCTCACCGCTATAAGTAGCCGATGTAG
GTGGCACTTTTGCGGCGAGAACGTAATCCCAAATGTGACTGAGCTTGTAT
CCCCCCTCGTCTCGGTTCATCACTGGTGATGACTGTCCCAAATGTGCCAA
ACTGTCCCAAACGTGGCTCTCATATTGCATTATTTCAGACTTATTTCTGA
CCTTGAATGTGTTGCAAAGCAGGGTCCCATGCATAACCAATGAAATGAGG
GAACTTTTTCTGCATTTTCTGACTTATGTCTTCCGTCGTGCGCTGCAGGT
TACGGAGGCGAAGGTGACGGAGATAAAGATTAACGAGGCGCGTGAGTGGT
ACCGCCCCGCCGCCGCCAGGGCCTCGCTCCTGTTCTTCATCCTCAACGAC
CTCAACAAGATCAACCCGCTCTACCAGTTCTCGCTCAAGGTGTGTTTCTT
TGTTTGTTTGTAGTGTCGTGTTGGTGTAACGGTTAGGGTGTTTGGCCCGG
AACTCAGAGGTCCTGAGTTGGAATCCGCTGTTATGCCACTGATGTTGTGC
CGTTGAGAAAGGCACTTTATACAACTTTCTTAGGGACCTCTCCCTATAAA
GACGTGGTCCACTGTTCAATGTACCTGTCAAAAAGAGCTAGGGGAATTTC
TCCAGTGCCTGTAAATACTGTACATAGTATCTGCCGTCTCTGTCACCACC
AGTGGAAGAAAAGCTGAGACTTCATTGTGCCCATTGTCTACTTCCTTCTT
CTAAAAGCATCTAAGGGATAAATTTTTAGTAAATGACAAACAATTTACAA
TAACTGTTATTTCATGCTTCCCTTTCCTTAACATGTGGTATTGCAAAGAC
ATTCCACAAGATATTCTTTGTCAGCGTATGTACAACTGTATTCTTTTGTT
TCATGTTTCTGTATTGCATCTTTTGTTTATCTGAATAAAGTTTAAAAAAA
AAAAATTGTTTTTCTGAATAAAGTTTAAAGAAAAAAAAGTAAAAAAAAAG
ACATTCTGCATGATGTATGTTTAATAATATGTATTTATTGAATAAAGTTT
TTTATGAAGAAAAAAAATTCTACCTTCCTCCCAGGCCTTCAGCGTGGTGT
TCAACAAGGCCATCGAACGCGCCACGCCTGCCGAGGAGGTCAAAGTGCGC
GTGGTCAACCTGATCGACTCCATCACGTGGTCTGTGTTCATCTACACCAC
GCGCGGCCTGTTCGAGCGCGACAAGCTCACCTTCACCGCGCAAGTCGCCT
TCCAGGTCGGTTTCTTTGTTTGTTTTTCTCAGATCTCCATCAGTGTTTAA
TTTTCACAAATTTTACACTATTCTTCCTAGAGTACACTTACATTAGATAC
AATTATTCTTTCTGCTCAAGTGTTCCTGATGATCAATGAGATCAACCCAG
CAAAGACAGTCAGTCTCAGGTCTTTAAGTAATCATATTAGTGCATCTTAA
GTAGTATCTAAACCTTCCCTCTGCCCAGGTTCTCCTGATGTATCTATAGT
ATCTGATATTTGAGTTATAATAGCTCTCTAAGAGCCCAGGTCCCCCTCAT
TATATTGTCAGTCCTGCATACTGTTAGTCACAGGTTTCTAAAAAGCTAAA
ATTATTACTGGCCCTTTCTTTAGACTTTCTGAATTTGCCTTCTGACCAGG
TTCTCCTGAATGTAGTGTCTGATATCATACTGTTATAATATCAGCTCTAT
AAGAGGCTTTATAAGCTCATCTTTAAACTGATTGTCAGTCCTGTATACTC
AACAGACTTAGTCTTAGCTCTCTAAGAAACGCTTTAGTTAGTAGCCCTTC
TTTAAGACTTTGATGATGAAGACCTGAATTCCTTCTGCTCAGGTCCTTCT
GAATGTAGTATCTGATATCATACTGTTAATATCAGCTCTCTAGGAGGCTT
TATAAGCTCATCTTTAGACTGATGTCAGTCCTGTATACTGTAGGTTAGTC
TTAGCTCTCTAAGAAGCTTTAGTAGCCCTTCTTTAAGGCTTTGATGATGA
AGACCTGAATTCCTTCTGCGCAGGTCCTCCTGATGCAGAAGCTGATCAAC
CCTGCGGAGCTGGACTTCCTGCTGCGCTTCCCCGCGCAGGTCAACGTCAC
CTCACCTGTCGACTTCCTGTCGCACCCGAGCTGGGGAGGAGTCAAGGTAA
AGCTCGTCGTCGTGTTGGCGTAACGCCTTGTGTTGTAACAGTTGTAATGG
TTAGGGTGTTGGGTACAGAACCTAGAGCTCCTGGGTTTGAGTCCCCTGTC
ATGCCACCGATGGTGAGCTCTATTAAAACCATTTCTTTCTGAAAATCTAT
TAACCAATGGCATTTCTTTATCAGACCAAGTCCTAACTGCAAGCGAAAAA
AATGTCAAGCTGTCGACAAAAGAAAACTATCGTAATGTTTCCCCACCAAT
TTTGTCACATAAATGCTACCATCCAGAGTAAAGTGATAAATGCTACAGAA
TGTTACTGTCATGTTACAGTAGCAATGCAGTTTCTGCACTATGCTACAAA
ATGTTGTCTCCCTAACAATAGAATAACAGTCTCCACTCGCTCTGCAATGA
TAGAATTTGTGCAGACAGTTTCAAAAGTTTGTCTCCCAAACCTCTACCAA
CTCTGTGCACTCCCGAAAATAATTTCATCAGGTTGGTCAGGATATTGGAG
ATTCTTTTTACACAACTAGTAAAGCAGTACTTCAGTCAGAAGCTCTGAAG
AAGGCCGTCTGACAGACACTGAAACGTCAGCAGGTGAGATTACCTGGTTT
GTAAAAAGAAAATCTAACACCGCGCACTCTTGACCCCCAACCACAGGCCC
TGTCCCAGATGGACGAGTTCCGTAACTTTGACCGTGACATTGAGGGTTCC
GCCAAGCGCTGGAAGAAGTTTGTGGAGAGCGAGTGTCCGGAGAAGGAAAA
GTTCCCGCAGGAGTGGAAGAACAAGACTTCCCTGCAGAAACTCTGCATGA
TGAGGGCCCTGCGGCCCGACAGGATGATGTATGCTGTCAGGTGGGTCGTT
TGTTTGTTTGTTTGTTTCTTAACTATAGAAACTGCATGATGAGGGCCCTT
CGGCCTGACAGGATGATGTATACTGTCAGGTGAGTTGTTTGTTTGTTTGT
TTGTTTGGAAAGATTAGTCTCTCTAGCCTTACAACAATGCAACAGTTGTC
AGGTTGATTTGTTACTGTTAGACGAAATTTAGGTACTCTGCATGCTAGAG
GCTGTTTGATTGTTTGCTTATCAATCTATTTGTCTGAACATACCAAGCAC
TATATTCTTATTAGAGCTTTGCCTCAGTCTATGCAATCTTTGGCCTTCAA
TCCCTTCCAGATTATCATTTTTTGCTGCACTAGATTTTTAAGTGGGTCTC
AATAGATTATAACTCTGTTTTTTTCATCGTTTTTTTCCCCCTCGAAATAA
CTGGTCTTCCATGGGATATTTTCTTGCAGGAACTACGTTGAAGAGAAGCT
AGGCACGCAGTATGTCGAGGGGAGCAGCGTCCCGTTTGCGAAGTCGTTCG
AGGAGAGCAGCCCGGAAACCCCCATGTTCTTCATCCTGTCGCCGGGCGTC
GACCCCCTCAAGGACGTGGAGGCTCATGGGAAGAAGATTGGCTTCACCTT
CGACAACCGGAACTTCCACAACGTGTCCTTGGGTCAAGGTCAGGAGATCG
TGGCGGAACAGGCGCTGGATCTGGCCGCCGTCGAGGGGCACTGGGTCATC
CTGCAGGTCGGTTTGTCTTCATAGTTGTTCTTCGTGCTATTGTTCCTGCT
GTCTGCAAAGTTATTCATAGCGTGAAATGATTCTTATAACTGTTATATGA
CAGGTATGATTAGTCTTGATGATATGTTAATTTTGTTTTTCATCAGATTC
AAGCTTCCTTAGGGAAACTGACAAATTCTTAGCTCTTAGCAAAGTTCTTT
TCCCTTTTTTTCACTACAGAATGTCCGTCTGGTGTCTAAGTGATTGGGTA
TTTGTGGTTAGCATAACTGAAAAAGGTCCTAATGGATTGTGAGGATATTT
GGTATGTGGATAGGTATTGGAAAGAGAAAGGTCTAGGTCGTTTTTGGCCT
CCTGGCAGCTTTCCGGCTATATGTCATAGTGCTGTAAACGCATTTTAAGT
TTGCGGGCCGTTTATTTCGCGGTAGGGAGAAAATGGAGTGTTCGCGGTGG
TTTTAAGTTTGCGTTTGAAACAATAGATAGACAAGGGGGTAGGAGGGCAA
CAAAAATTTGCGGTGGTTTAAAGTTTGCTGTAAAGAGCTAACCGCAAAAA
CCACAAAGTTTAACATAAAACCACCGCGGACATTTCTGCATTTTACAGTA
ATTTGTCCTGATATTTTGTATTCTAAAGATTTACCTTTTCCGTCTTTTCT
ACTGCAGAACGTCCATCTGGTGGCCAAGTGGCTAGGTACGCTGGAGAAGA
GGCTGGAGAAGTACAGCGTGGGCAGCAACGAGGCGTACCGAGTCTTCATC
TCGGCCGAGCCGGCCGCCACGGCAGCCTCCCACATCATCCCGCAGGGCAT
CCTCGAGTCGTCCATCAAGATCACCAACGAGCCGCCCACCGGCATCCAGG
CCAACCTGCACAAGGCCTTCAACAACTTCAACCAGGTGGGTGGCAGGCAG
AGCTTACTAACTAACTAACAAGCGCATCATAAGAATGAGAAATAACGAGC
CGCCCACCGGCATCCAGGCCAACCTGCACAAGGCCTTCAACAACTTCAAC
CAGG Coding sequence (CDS) from alignment at Sc0000052:642785..649088- >BlTCONS00064081 ID=BlTCONS00064081|Name=BlTCONS00064081|organism=Branchiostoma lanceolatum|type=CDS|length=1569bp|location=Sequence derived from alignment at Sc0000052:642785..649088- (Branchiostoma lanceolatum)
GTACTGGGCAGGAACACCATCAAGAAGGGACGCTACATCAAGATCGGAGA
CAAGGAGTGCGAGTACAACCCTAACTTCCGGCTGATCCTGCACACCAAGC
TAGCCAACCCGCACTACAAGCCGGAGATGCAGGCCCAGTCCACCCTCATC
AACTTCACCGTCACCCGGGACGGCCTGGAGGACCAGCTGCTGGCCGAGGT
TGTCAGGTGCGAGAGGCCCGATCTGGAGACCCTCAAGAGCGAGCTGACTC
GTCAGCAGAACGAGTTTAAGATTGTGCTGAAGGGGCTGGAAGACAACCTG
TTGTCCCGCCTCTCCTCTGCTGAGGGCAACTTCCTCGGAGACACCGCGCT
GGTCGAGAACCTCGAGACGACCAAGCGTACGGCCGCCGAGATCGAGGTTA
AGGTTACGGAGGCGAAGGTGACGGAGATAAAGATTAACGAGGCGCGTGAG
TGGTACCGCCCCGCCGCCGCCAGGGCCTCGCTCCTGTTCTTCATCCTCAA
CGACCTCAACAAGATCAACCCGCTCTACCAGTTCTCGCTCAAGGCCTTCA
GCGTGGTGTTCAACAAGGCCATCGAACGCGCCACGCCTGCCGAGGAGGTC
AAAGTGCGCGTGGTCAACCTGATCGACTCCATCACGTGGTCTGTGTTCAT
CTACACCACGCGCGGCCTGTTCGAGCGCGACAAGCTCACCTTCACCGCGC
AAGTCGCCTTCCAGGTCCTCCTGATGCAGAAGCTGATCAACCCTGCGGAG
CTGGACTTCCTGCTGCGCTTCCCCGCGCAGGTCAACGTCACCTCACCTGT
CGACTTCCTGTCGCACCCGAGCTGGGGAGGAGTCAAGGCCCTGTCCCAGA
TGGACGAGTTCCGTAACTTTGACCGTGACATTGAGGGTTCCGCCAAGCGC
TGGAAGAAGTTTGTGGAGAGCGAGTGTCCGGAGAAGGAAAAGTTCCCGCA
GGAGTGGAAGAACAAGACTTCCCTGCAGAAACTCTGCATGATGAGGGCCC
TGCGGCCCGACAGGATGATGTATGCTGTCAGGAACTACGTTGAAGAGAAG
CTAGGCACGCAGTATGTCGAGGGGAGCAGCGTCCCGTTTGCGAAGTCGTT
CGAGGAGAGCAGCCCGGAAACCCCCATGTTCTTCATCCTGTCGCCGGGCG
TCGACCCCCTCAAGGACGTGGAGGCTCATGGGAAGAAGATTGGCTTCACC
TTCGACAACCGGAACTTCCACAACGTGTCCTTGGGTCAAGGTCAGGAGAT
CGTGGCGGAACAGGCGCTGGATCTGGCCGCCGTCGAGGGGCACTGGGTCA
TCCTGCAGAACGTCCATCTGGTGGCCAAGTGGCTAGGTACGCTGGAGAAG
AGGCTGGAGAAGTACAGCGTGGGCAGCAACGAGGCGTACCGAGTCTTCAT
CTCGGCCGAGCCGGCCGCCACGGCAGCCTCCCACATCATCCCGCAGGGCA
TCCTCGAGTCGTCCATCAAGATCACCAACGAGCCGCCCACCGGCATCCAG
GCCAACCTGCACAAGGCCTTCAACAACTTCAACCAGGTGGGTGGCAGGCA
GAGCTTACTAACTAACTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00064081-exon-Sc0000052-1564993656:649055..649088 | BlTCONS00064081-exon-Sc0000052-1564993656:649055..649088 | Branchiostoma lanceolatum | exon |
| BlTCONS00064081-exon-Sc0000052-1564993656:648476..648680 | BlTCONS00064081-exon-Sc0000052-1564993656:648476..648680 | Branchiostoma lanceolatum | exon |
| BlTCONS00064081-exon-Sc0000052-1564993656:647888..648052 | BlTCONS00064081-exon-Sc0000052-1564993656:647888..648052 | Branchiostoma lanceolatum | exon |
| BlTCONS00064081-exon-Sc0000052-1564993656:647050..647190 | BlTCONS00064081-exon-Sc0000052-1564993656:647050..647190 | Branchiostoma lanceolatum | exon |
| BlTCONS00064081-exon-Sc0000052-1564993656:646234..646404 | BlTCONS00064081-exon-Sc0000052-1564993656:646234..646404 | Branchiostoma lanceolatum | exon |
| BlTCONS00064081-exon-Sc0000052-1564993656:645343..645465 | BlTCONS00064081-exon-Sc0000052-1564993656:645343..645465 | Branchiostoma lanceolatum | exon |
| BlTCONS00064081-exon-Sc0000052-1564993656:644499..644692 | BlTCONS00064081-exon-Sc0000052-1564993656:644499..644692 | Branchiostoma lanceolatum | exon |
| BlTCONS00064081-exon-Sc0000052-1564993656:643783..644059 | BlTCONS00064081-exon-Sc0000052-1564993656:643783..644059 | Branchiostoma lanceolatum | exon |
| BlTCONS00064081-exon-Sc0000052-1564993656:642785..643131 | BlTCONS00064081-exon-Sc0000052-1564993656:642785..643131 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000052 | genome | Sc0000052:642785..649088 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF031396 |
|
