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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000051:967630..976251- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00063662 ID=BlTCONS00063662|Name=BlTCONS00063662|organism=Branchiostoma lanceolatum|type=mRNA|length=8622bp|location=Sequence derived from alignment at Sc0000051:967630..976251- (Branchiostoma lanceolatum)
CCTACAAGCACCAGAGGACCACAACATTTGTTGTCAGGACAAACATGAAT
TCTGCTAACACACAACTTGATTGGTGTAGTCGAGGCTACGTTTTACCACT
ATGAAGAGCCTGCTAGAGGGTAGAAGGCTGCTAACTAAATCTTTTCATCT
TCCGACCCTCCCAGTCTGTGTTACTCTCTGTTCCATGCCTCTGTCGTCTT
CCCTTCACACGATCATGTAAATATCCGTACTTGTTCATGTTCCCTTTAAA
CAATGACGGAAATCCCCGTACATGTTCATGTTCCCTTCACACAATAACGG
AAATGCCCGTTCATGTTCATGTTCTCTTTACACCATCATGTGAATGTCCG
TACATGTTCACGTACCCTTTACACAATGACGGAAATGTCCGTCGAACATG
TTCAAGTCCCCTTACCCCTTAACCAACCCCCTTCCCCTGAAACCGTACAC
CCTGTACCAGGCTTCAGATCAGAAATGCGCAGGATTCTTTACTCGGACAT
GTTTTATTAATCAAACATTCAATATAAACTTTTGCTATTTTTCAGTTTTG
ATCCCGCTCTCTTCATCTGAGGGAAAATGATGTTCTCTTTCTTATATCTC
CGTTTGTAATGCTCACAACTTACCTTCAACCGTTGGCTTTACAGAGGCAC
CTGCAGAAGTAGAAGAAGAAGCAGCCATGTCGGATTACGAAGAGGAGGCG
GTTGAGGAGGAGGTTGAGGAGGAAGTGGCTGAGGTTGCTCCCGAGCCCGA
GGCCCCCAAGCCCAAGCCACCGCCCCCGGCAGCCCCCAAGATCCCCACGG
GAGAGAAGGTCGACCTTGGCGCCATCGCCGCCAAGCGCAAAGACAAAGAT
CAGCTGGAGCTGGAGTCCCTCATAGACAAATGGTTCGAGAAAAGGACCAA
GGAAGACGCCGAGCTGGAGGAGATGCGCCAGCTGAGGGTGAGTAGGCGGT
GTTGTATATATCCTGACATTCAGTCTAGCGTGGTTTGGCAGGGCTCTCTT
CGGGACAGAAGGGGCTTTCCACCGCCAGTAGTAGTGAAGGAAGCATCGGG
TTCAACATATTACCCAGGCGGCAGAGAGATCTCTCTGCCACGATGAAAGC
TTGGCCAAAGATAGCTCGTCTTAACCACGTTGTAAAGGGCCTAGGTGTGA
GAAGTTATATACATACACGTCAGAGTATATATAGAGTTTGCGATCTTGCA
GCATCGGAGTTCGTCGAGATCAGGGTGCTAGGAATGTGTTCAGGTTGTCT
CCCATTTATAACTCGGTCTAACGTGACAGGAATCTATGTTCTGACTGTGA
GGGAATCGGTGATTATGCCCTGGTATATATATAACCATCCATATATACAT
ATCGAACAACTGATAGAGATAGAGATACTGGGGGTCTCGGAGATAATGAT
GGCGACGAAATGGAAGAAAGCAGGGATTGAGGTAATGATTGGCCATGTGT
TCTTGTGGGTTTGTGTGCTGCATGACAGAGCACCTGATCGGATGATGCGA
CACATCTGTAGCAAAATCATGAGAGGGAATTTAAAACATGTCGTTCGCTC
CTTGTTTTCTCACAGGAACAGCGCAAGGCGGAGATGGCAGAGAAGGAAGA
ACTGAGGAAACAGCAGGAGAAGGAGCGTATCGAGGCTGAGAAGGTAAGGT
TACTCACGCGCGCCCCCTGGCGACTCCAAGACACACTTGACATTTCCTGT
AGAGGTCGTACGTTCGAAATATTCCGTAGTCAACAGTATACAACATGTAT
TCAACATGTATAGCTAAGCTGCCTTCAACGCCGTTTGAAATTTGTAGTGT
AAAATGTCATGAACATTTTGACTTACATGAAATTTTCAGCATCAGAAATA
AAAGGAGGAAAACATTGCTTCGACTTGCAGACAATTGCAGCATTCGTTGT
CTCATTTGTGCGTGCTGTACAAAACGGTAAAGTCATTGTGTTCTACGTAT
AGTAAATGTTGACCATATGAGAAAAACTCAGTATATTTTCCTGGTTAAAG
ATGTCTTCGCCTGTTGTCAAATGGGGATTGCTTTTCATGGGAAAAAACAC
GGGTGTAATGGAATCGATCGAGACCTTCCTACTTACTCTGATACTCAATC
CAAGAGCTAGTCAAAACCAGACTTAACCGGACTGAGGGGACACCATGGCT
CAGGCAACGCGGCGTCAAATTCCTCTGTTGTGTCACATTTTAGCAAAAGC
TGAAAACGCAGCGGGAACAGGAGGAGCAGAGAAGGAGGATGCTCGACGAT
CGCAAGAAAAGACTCGGCAACACCAACCAGCACCTGGGCGGCTATCTCAG
AACTGTAAGCTCGGGCTAACGTTGTTTATGTTTCCAAAGAAATAATCTCT
GTCATGTTTTTTTTTGTCTCTCTCTCCCTGTCCCCCCGCCCCGTCCACCA
AACAGCGTCGCATGCGTGAACAGAAGGAAGCAGAGGAGAAGAGGAGGCGC
GAATTGGACGAACGGAAGAAGAGACTCGGCAACGTCAACATGCACATGGG
CGGCTACCTGAGAACTGTAGGCAAACATACCCCCCACACGCACGTCTGAC
CGGGTCACGGCGCATGCGCACGAGAACTACGACAAAGAACTCGCCTATTT
GACCTTCAAAAAATGCATGATTTATATTTGACAACATGTTTGGAAAAGTG
ATTGACAATGCTTGAAAGGGGGTTGTAAAAAAAACGATATAAATGAAGAA
TAGACTTGTTTCGTAATGGGATAGGGATTCTGGTAGCCGAGTGACCCGTA
CAGATATAGTGTGCTCGCTTTCGAGTGGTGCGGTGTGTGCTGTTCTCTCC
TCAAACCCTCTCCTTTCCTGCACGGCTTCCGTCATCGCCTTCTTCTACTT
TTTCTTCCGACTTTCTCCACTAGACACGCAGCGTTCCACGATGCCGCCAT
TTTCACCATCACTTCCTCTCTTCCATGACGTCATTTCCCTTTCCGTGTGT
TTTGACAAATTTTCGTTGCCACTGCGATGCATACACGAACACGAGCTTCC
ATTTACCACTTTCGGAGTTTTGTAGCTTCGAAAAAATGATCAACGATCTA
GGGTCATAAATAAAATCGGAAGGCAACAAATGACAGAAAACAAGGTATCA
GCAGTACACATCAAGGCATTTCCTTCGCTTGACAAAACAGAATGACAGCA
ATCGTTTTCACACCATAGCCCGACATACATCATTTTCCTGCTCATTTCAC
AGAGCTGCCATGAATATACTTCCATATGTAGACTCCTTTTTTTCCTTCCT
ATACCTTCGCGCTCATTGCTTTCCTTCGCATATCATCGCTAACTGCGCAC
TTGTACAGCTCTAGACTGATAGAACTCGCATCTGTCGTAGAGCAGTGGGT
GGTACCGCGTTCAATATATTGTTGTTGATAGCGCTTTGTCTACGTATACC
TTTGTTTCTTTGACCTGATAGTATAGTGACGACTGTCTGCTACTTTCCTC
CTGGACTTGTTCATGTTTTTACTAACAATCCAACGCTGCTCCCTTCCTTG
TTCGAGCATTCTTGTCTGCTTGTTTTGAATGCAGTGTTTGTATTCCTTCT
GTGACGTAATGGATTTTGGATTATGGATATATGATCGTAACGTATATATG
CTGTAGGTACGATAGAAAATTATCTAAAATTCGAAACGATATACTCTGTG
GCTTTCTGTGGCTTATAGCCCCAAATCCGTCTATTGCCGCTGACGTCGAC
GTCTATATCTATTACCGAATTATGAACTGATCACGCAAATATCAAGTATT
GTAATATGGGACAAAATGGACATTCATCATTATAATAGCAGGATATATAA
TCTCAGAATGCAAGATTTTGACTTACATATATTATGCTGCCAAATGGCAA
TGAAACAAATTGAGTTTCCGTTAGAAAGCCACAGTCGACTTCCTACCAAC
TACTTCGTGAAAGTAAGGAGATTCTAAGTAGAAGCCCGCGGTGTTCTGCT
GCTGCAGTAGTCTGGGCACCCTGAAGCTGCTAGGAGATCTGGAACTGATT
GTCAGACGTGATTTGACGTTTTGTATTTGGTCTCATCCTTTGTATAGCTC
GAGAAGAAGGGCCCAAGCAAGAGAGACATGGCGGCCGAGAAGAAGCGCAA
GACCGTAGAGCTGCGTGTCGGGAAGTTCAGCTCCGACGCCGTCTCAGAAT
CCTACGCCGACGAGCTGCATGAGAAACTGCAGCACTCCGAGGAGGCACTC
TACGACATCAAGGACAAGGTCAAGGTGCAGAACCAAGACGTAAGTGACAT
CTTCATTATTGTTTTCTCGCACTCATGGAAACCCGTCGTTCCTTTGTTCA
GTTATTCTCCTTAGACGATTTTCACAATAACCCCCCTGCAGTTCCAGAGC
AAGCTGCTAGGGGACCCAAACCTACACTACTTCTTTATTACATCACAAGC
TATCTGCCACCAACGATCAAGACCTTAGCAAGTCCAGGTCAAAGGATACA
AAAAAAGAAAGTTATGCTGCAGTACCAAGGTCACATACCAGGGGGCCCAA
AATCGACCTGGACAATGATGACAATGACAAAGCAGTCTTTTATATATGTA
CCTATTTTTGCATTGTGGGGTTGTTGCATCTAAAAATATATTCAAATCAG
TCGGTAGCATCGATTCTCTTATAATCCGATATACTTGATTTAAGAAATGA
GAATAACTTATTACGTAAAACATAGGTGGGAGGGTGGTTATAACTGTCCT
TGGTGCTGATTGGCTGGTTACACTTATGTGCATGGTTCGAAGGTTCTCAT
TGGCTCTTCTGTCAGCTCATGCCCTGCTCATGCATATATTTCAAATATAT
TGATTAATGCCACGTCACGATAGATTAGTCTTAATTAGCTTTGTTTTGAT
CAATATGGTAGAGGACGTAGATCCTAGTGCTAGTCACACTAGCCGTAAAC
AGAATAAGAAATTGACAAATTTTTCTACGGAAAAATTCATGTTTAGTCTG
AATGAACATTAGATTTTTAACTTTTTGCATTCATGGGTCATAGTTTTGTT
GATACAGCCTCATGAATATAGAATTTCATGCGTGCATACCTACATACTTA
CATGTAAATAAGTAGTAGTGAATCGCAGTTGTTCTAAGACAATTGATGAT
GATGTACCTTTCTTACAGGTTGAACGCCTCAGGACAACTGTCAACGAGAG
CATGGGCAAGTTGTAAGTACATCTCCATGACATTTACCATGTTACGTCCA
TTAATATCAATCTGCTGGTTTACATAAATCTGGCATGTTAAACAAATCCG
CCACTTTGAAAAACAGTATGTTTGAGAGATCTCTATTTAGTGCACCATCC
CCACGTTGAGTTGGAGATCTATTTTGACGTATCTTAACGGGGTGCCCGAA
TTATGTACCCTGTTTAAATTATGCTAGTAGATGATGGCGTTTCCATAAAA
CTAAGCCACAAAGTATGTCACAATTTTTCATTTTCTTTTATCCAAACGTT
TACAACTCTTGAATGTAGAGTGTCATTCGTTGCAAAGCTTCAGACTAATT
TTTTAAAAATTTTATTTCTATAGCTCCAAGCCTGGAGCAGTGTCCAGGGG
CAAGGTCAGCGGAGGCAAGTGGGGCGCAAAGAAGTAAGGTAAGTGTCACT
TACCCAACAACCGGAAGCTACATGCCGCCCTGCAGTGCATTCGGGGAAAA
TACTCCACCATCTTGGAAGAAAGTCGTCAAAAGGGGAAAATGCTTGTATA
TGGCTGAACACCACAATAGGTGAACGAAGAGTATAATGGCTTCATGTTAC
GTTAGTAGTTTCTTTTGTGGAAGAAAGATACCTTTTTTCTCGGTTTTACA
TGTTCAAACCTCCCCCTCCCCCTTTCATGGCTCCAACCAAACAAGTAACA
AAAACGCGGAACTTCAAACTTCAATGTCACAAATCCTGGTATGGGAAACA
AAAACAGTAATGATACCCGTACCATTTTTCAAGAATTTGATGAACCAGCT
TTTACCTACATTTTTCGTTGAATATTTGTCGACAATCAACGAATAGGAAG
AGCAATAGATTGAAGAATGTTTTTCTATTTTCACAGTTGACGCTTTGCTG
CTTCGTGATTCCAGTACAACCATAGGTTTTGTATGGCATGTATGGTATTG
TCTGTTGCACCAGGTTGATCGTACCCCAGGAGGACACTTTGTTTTCCGCC
ACTTCTCATTCTCCAGCCTTGTTTTAATAAAGATGTAGTGCCACTGCGAT
TTTCAAATCAGAATTTCAAAAGCAATTAAAAAATAAAGAAACAAACCGAC
GCAGGAGTTTTGATTTTAAAAGATATTTACATGTTGAATAACAAGACTCT
TTGTTCACAACCAAGTGATTTATTCAACCGACGTTTCGGTGACCATCTGT
CACCTTCCTCAGGGCAATTCTGACATTGCACTGCAGCAAAGGTGTCGCCG
CTGCTTATAGATGCGTTCCCAAACGCAAAGTATTTACATATGTATACAAA
GAGTCTGTTTATTCGGTGACTTACCAACCTGATGAAAATATTCACGGATA
TTTACATGTTTATCAATTATGGTGCTCCGTGGTTGGTCCATTCCTGTCCA
ATCAGAGATCGAGTCACAGGCCTTGGCACTACATCTTCAGACCCTGTACC
TAAACCTGTTCTTCTGTAGTAGTAGTCCCCAGAACTCTCAACTAAATGCA
CTTTTATCCCCCACAAGGAACACTCCCCCAAGGTAACGTAGTGTAACACT
GTGCACCTGTCCACCTGTAGTCTGCACGTATCGACTCAAGCCTCCTCCTA
TGTAGAAGACCTCTCTTTGTAACAACAAAAAATACTACAACACAACCACG
TGCACTGCATCACTAACTACGTTGTGTCAATAATCAAAACGACCACAAAT
TTGTCAAGAATTCTCTGTACGTTTCCCGACTAACATCGTTTGTATGTAAC
CAAAAACTAGTGACATTATGAATTCTGCTAAGACAGTAGTTTCTTTCTAA
ACAAGTAAACTTCCATGGCGTCGTAATGAGAGGTTTTCCGGTTATATGGG
AGGTATTGAGGGCTTGGGATATAGGAATCTTGTTTATAATAATGTGTCGT
ATTTTGCTCTATCTTTTCTACAGCTAAGCCAAGTGGATTGTGAACTGATT
TCCTCGCCTGGCTACCTTGCTGTCCGCCCCGCCCTGCACCGGATCGCCCC
CCTCCCTCTAAATGCTAGTCTCCTTTACTTCTTCATGTACGTTTTGATTA
CTGTATTCGCCAAAAATGTCCCGGAAGAGATACACACTATTATATACTCT
GTAAAGTCACCGTGAACTCGACAAAGAACAACTTGCAAAACTTCTGAACA
ACATTTCTGGATATTTTTCATGTATTAGAACTCACTTGTTTGTCCACGTG
TCAATGGACGCATGTAAAAATGACATTGAGCGTCGTGTCGTTGTTATTTC
ATGTATGTTTGTTTGTTTGTTCGTTGGGGTGCGTAGTAATATTCACGAAA
GCCACGTGCTTCTAGAGTAGAAGCTCGTGACGTTTCAATTGAGTACGCTC
CTAGTTGCTGGCGTCTCGTGGTCATATGTTGTTGCTGTGTCTATTTCTTT
TCCATCTGAAATTTGTGCGTGCGACTTTGGCGACCATATTGCCGCGAGAC
GCCCCAACTAATGTCCTGACCACAAAATCTCAAACCCTTTGTTTGTATGT
CCGTTTGCTTTGAAAAAGAAAAAAGAAAAATGAAAAAAAAAGCAACACCT
CTATTCTTAGATTCAACTGGCCGGTTATCTGAGATCGTAATTCGGAGCTT
TGAATTTCAGACTAGGGCTGTCAAATAATAACAAGTCTACTACGTAATCT
GTGATTAAGAGTTACATTTGCATTGTACAATAAATAAAAACCAAAAAAAT
CTAAAAAGACCAAATCTTTGCTTATATCAGCTTCTTTTTTGTTGTAACGA
AAACCAATGCTATACATACAGATTGCGCTGACTTTCTATAGAAAGGACAT
ACTGCGCGACGGAATGTTTCATTGGCCAGGTATACAATATAATTGAGTGG
GCAACATTCAGAGGCCAATGGGAAAATAGATAACATTTGCATCGTTTAAG
TGATGTAGGCCCCTTTCTCCAAAAGATTTACGAATGTAATAATTAATTCG
TATCAAGGCCCTAAGATACAAGGAGAAAACTCGTACCTTTTCCCCTGAAT
ATTTAAAGGAAACATTTTACCAAATTTTCTAAATTGGAAATACACCACGG
CCTGAAGTATCTGACATTCAATAGCCTTTAATAATTACTTGGACGAAACC
ATGTAACACTGATCTAGGGGGGTGCAGGGTTAAAGGAGGTGCAGGGTTAT
GTGACGGAAAGTTTCGGGATATTTTGGCGACGCTTCAGGAGCAAGCCTAA
TTTATCCTGTCCACAATTGCTCGGAAACCAATGGAAGACGGCCGGGGGTG
TGCTAACCAGGCAAGATGCTGGTAGAAGCAATCGGAGAAATTTGGAAACA
GTTCGCGGGAATTCGTTCGAACCCTGCACCTTCTTTACATTAGCTGAATA
TGTTGATATTTTACAGCTGAAACAAAGGTATTGACTCAGATAGTAAGAAA
AATGTTACGAGAAAGTTCGAAATAAAGTAAGAATATTTGGGGATTATACC
CGTCGTCGTTCCGAGGAGTTTG Coding sequence (CDS) from alignment at Sc0000051:967630..976251- >BlTCONS00063662 ID=BlTCONS00063662|Name=BlTCONS00063662|organism=Branchiostoma lanceolatum|type=CDS|length=801bp|location=Sequence derived from alignment at Sc0000051:967630..976251- (Branchiostoma lanceolatum)
ATGAAGAGCCTGCTAGAGGAGGCACCTGCAGAAGTAGAAGAAGAAGCAGC
CATGTCGGATTACGAAGAGGAGGCGGTTGAGGAGGAGGTTGAGGAGGAAG
TGGCTGAGGTTGCTCCCGAGCCCGAGGCCCCCAAGCCCAAGCCACCGCCC
CCGGCAGCCCCCAAGATCCCCACGGGAGAGAAGGTCGACCTTGGCGCCAT
CGCCGCCAAGCGCAAAGACAAAGATCAGCTGGAGCTGGAGTCCCTCATAG
ACAAATGGTTCGAGAAAAGGACCAAGGAAGACGCCGAGCTGGAGGAGATG
CGCCAGCTGAGGGAACAGCGCAAGGCGGAGATGGCAGAGAAGGAAGAACT
GAGGAAACAGCAGGAGAAGGAGCGTATCGAGGCTGAGAAGCGTCGCATGC
GTGAACAGAAGGAAGCAGAGGAGAAGAGGAGGCGCGAATTGGACGAACGG
AAGAAGAGACTCGGCAACGTCAACATGCACATGGGCGGCTACCTGAGAAC
TCTCGAGAAGAAGGGCCCAAGCAAGAGAGACATGGCGGCCGAGAAGAAGC
GCAAGACCGTAGAGCTGCGTGTCGGGAAGTTCAGCTCCGACGCCGTCTCA
GAATCCTACGCCGACGAGCTGCATGAGAAACTGCAGCACTCCGAGGAGGC
ACTCTACGACATCAAGGACAAGGTCAAGGTGCAGAACCAAGACGTTGAAC
GCCTCAGGACAACTGTCAACGAGAGCATGGGCAAGTTCTCCAAGCCTGGA
GCAGTGTCCAGGGGCAAGGTCAGCGGAGGCAAGTGGGGCGCAAAGAACTA
A
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00063662-exon-Sc0000051-1564993656:976133..976251 | BlTCONS00063662-exon-Sc0000051-1564993656:976133..976251 | Branchiostoma lanceolatum | exon |
| BlTCONS00063662-exon-Sc0000051-1564993656:975315..975607 | BlTCONS00063662-exon-Sc0000051-1564993656:975315..975607 | Branchiostoma lanceolatum | exon |
| BlTCONS00063662-exon-Sc0000051-1564993656:974609..974686 | BlTCONS00063662-exon-Sc0000051-1564993656:974609..974686 | Branchiostoma lanceolatum | exon |
| BlTCONS00063662-exon-Sc0000051-1564993656:973736..973846 | BlTCONS00063662-exon-Sc0000051-1564993656:973736..973846 | Branchiostoma lanceolatum | exon |
| BlTCONS00063662-exon-Sc0000051-1564993656:972013..972204 | BlTCONS00063662-exon-Sc0000051-1564993656:972013..972204 | Branchiostoma lanceolatum | exon |
| BlTCONS00063662-exon-Sc0000051-1564993656:971090..971133 | BlTCONS00063662-exon-Sc0000051-1564993656:971090..971133 | Branchiostoma lanceolatum | exon |
| BlTCONS00063662-exon-Sc0000051-1564993656:970669..970728 | BlTCONS00063662-exon-Sc0000051-1564993656:970669..970728 | Branchiostoma lanceolatum | exon |
| BlTCONS00063662-exon-Sc0000051-1564993656:967630..969178 | BlTCONS00063662-exon-Sc0000051-1564993656:967630..969178 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000051 | genome | Sc0000051:967630..976251 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF031171 |
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