BlTCONS00063657 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00063657
Unique NameBlTCONS00063657
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000051:913776..916544-

Legend: CDSexonpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00063657 ID=BlTCONS00063657|Name=BlTCONS00063657|organism=Branchiostoma lanceolatum|type=mRNA|length=2769bp|location=Sequence derived from alignment at Sc0000051:913776..916544- (Branchiostoma lanceolatum)
GGGAAGTTCCTCAGCCCTCAGATAACGCAAGGTGAAAGACGAATCCATAC AGATTTTACGATTAAGGAATACGAGGCCAAACTGAGGTAAGAAATTCCTA TCCCAGTCAGACCTCTGATCACTATACTACCACTGCAAACTACCTGAAAT AGCCTGATTCTTTTCCATGTTCTAAAGTTCTGCATGAAGTGCAGGGAAGG TAAGGCGGAAGCAAAATGCAAATGGCGAGGTTGTAGTTCTTCATTGTTGC AAATGTCTTAAGTTAGAATAAGTTAAGGAAAAAGCTCCCTTCCGAGAGGA GTAGTTGACGTCGCGGTTGCGTAGTGGCAGGGTGTTTGGCCCAGAGCCCA GAGGTCCTGGGTTCGAATCCAGAATCTGATTTGTCCCGTTGACGTTGTGC CCATGGGAAAGGCACTTAACAAGAATTTCCTCACTTCACTCAGGTGAAAA TGAGAACCTGACTTTATTTAGGGACATCCCTCGGATAGGACGTTAAATGG AGGTCCCGTGTTTGGGGAGAGCCACACCTCGAGCACGTAAAAGAACCCAC TACACTTATCGAAAAGAGTAGGGGCCCTTCCCGTGTGAGTGGATCAAATA AATCTGTCCGGATATGCAGCTTCAATACAAACATGGTGTGTTACGCAATG AGACAGTTTACCGGGTATGCAGTACAAACAAGCAAACTGAGTAAAAAGAC TCTTTTTACACAACCAAGAGATTTATTCCACCGACGTTTCGGTGACCATC TGTCACCTTCTTCAAGAGAATTATGACTGGTTCACATAGCAATGCAGCAC AGGTGTTGCTGCTTATCATAATGAAATGCATTCCCAAACGCAAAATATTT ACATATGTACAAATCACAGGACATGACATCACGGTCCCAAACGTACAGAA GTATAACATATGCACAACTATCGATCAAAAAACAAAAAACAAGCAAACTG TTGTTGATTAGAAGAGAACAGCTGTGAAACAGAGGAATGAATGTTGTTGT TGCTTATCTGGTGGAACTGTCCTGTATTCTTCAACATAGCAAGAAGAATA TATATAACCTCCTTGAACATAGAATGTCACATCTTCCAGTCACATCAAGA TGAAGCTATCAGCCAACTGTGGCATGTAGCCAGGGCTTCAACCATGCAGC CAAAGAGTATCATTATGGGATACTATATTGTATCATATCATATATCATTA GGCGAGATATCTAATGTGCTCTTGATGTGGCTCCCCTCAAACGTGTCACT TCCCTTTTACCCCCCCCCCCCTGAAGGACTTGCATTATACCGGTAACGTT AATTACGGGTTTCTAACAATCTGTTAAGTGTTATGCTGATGATGACTGTT GCTTTCTCTCTTAGATTGTCCTTCCTCTCTCTCTCTGCCCAGGAAGAACC AAGAAAGGCGGCAGCATCCGACTACGATCCCCGTGACATGGAACAGTGGT ACTTTGGGGGCGTCAGTCGCCGGCAAAGTGAGGATTTACTAAAAGGAACG ACGGTCGGGACGTTCCTGGTACGTGACGCTACCAACCATCCTGGGGACTA TTCGCTCTCTGTCAGCTCAGACACAAGAGTCCGCCACTACTTCATCAAAA GACTGCAGAATGGCTTCCAGATCGCTGACCAGGATTTCGAGGACCTGCCT TCTTTGATCGAGTTCTACAAGATACACTACCTTGACACGACCACGTTGAC TGTTCCGGCGCAGCGCCCAGCCGAATGACTGCCAGAACTCTAGCCCTCGA CTGCCGTACCTGCTCCCACTGTCATGTATTCGAGCGCTCTACGATTCTGA CGCAAACGATCCAGAGGACTTGCCTTTTAAAGAAAATCGAAGTACTGGTG GTGGTTAGAAAGGACGATTACCAGTGGTGGACTGTACGCAACAGGACATT TTTCATTCAAATATGTTAAAATTATCGACCCTAGTAATTTTGAGGAAATT TATTCATCTTGGGGCTAAACGGTGCTGGAAATAGATTAGATCATACACAG AAAAAGCTGAAACAAGAATCTTCGAGGCTAACAAGGTGTCAGAATGTTCC ATATAAAAAAATGAAAGGTGAAAACTTGGACTAACAAATGTAAAGTACCA AACGAAGAAAGGTGGAGGGTAGCATTTTATCTTTTGTGTACATCTACTAT TTCGTTTTGTTAGTAGCATAATTTTTTATTTGATTTATTAATCTTGAACA TACTAAAAACATACAAATGCCAATATACAAGAACAATAAAAGGAAACATG CATGGGCGATAAAGGAAAGCCACAGTGGCTTACTAGAGATCTCCGGATCC CCCGCTTAATACTAGTTGTAAATTGTAATCAAACAATCAATTAGCAATCA TAACCAATCATGTTATGGAACAATTTCAAAACGATGTTAATTCATTAAGA TTTGCGATTACACAATTAATTTAAGTTCATATGAAACTACATCAGTAAAC AAACAAATAATCAAATTGACTACAAACTTAACTACTTACAAACATGGGTG AACGAATAAGAAAAAGGATGAAGATATTCTTAAAATAGAATACAGAAAGT AAATGAAATATAGAGAATATTTGTAAATGTCGCACTCTAGGATGGGGCCC TAAAAAAATACAATTAGTATCAGCCCTGCGAAACGGAGCGAAAAAAACGT AACTAGTAGACCACATCCGAGGGGCATCATTGTCTTCGATATCTTTGCTT GTTGTTAAAAATGACAAATCATACATCTGTACTGTATAAGGTATACCTGC ATACAACTTTTATATGAGA

Coding sequence (CDS) from alignment at Sc0000051:913776..916544-

>BlTCONS00063657 ID=BlTCONS00063657|Name=BlTCONS00063657|organism=Branchiostoma lanceolatum|type=CDS|length=450bp|location=Sequence derived from alignment at Sc0000051:913776..916544- (Branchiostoma lanceolatum)
GGGAAGTTCCTCAGCCCTCAGATAACGCAAGGTGAAAGACGAATCCATAC
AGATTTTACGATTAAGGAATACGAGGCCAAACTGAGATTGTCCTTCCTCT
CTCTCTCTGCCCAGGAAGAACCAAGAAAGGCGGCAGCATCCGACTACGAT
CCCCGTGACATGGAACAGTGGTACTTTGGGGGCGTCAGTCGCCGGCAAAG
TGAGGATTTACTAAAAGGAACGACGGTCGGGACGTTCCTGGTACGTGACG
CTACCAACCATCCTGGGGACTATTCGCTCTCTGTCAGCTCAGACACAAGA
GTCCGCCACTACTTCATCAAAAGACTGCAGAATGGCTTCCAGATCGCTGA
CCAGGATTTCGAGGACCTGCCTTCTTTGATCGAGTTCTACAAGATACACT
ACCTTGACACGACCACGTTGACTGTTCCGGCGCAGCGCCCAGCCGAATGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00063657-exon-Sc0000051-1564993656:916459..916544BlTCONS00063657-exon-Sc0000051-1564993656:916459..916544Branchiostoma lanceolatumexon
BlTCONS00063657-exon-Sc0000051-1564993656:913776..915180BlTCONS00063657-exon-Sc0000051-1564993656:913776..915180Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00063657BlTCONS00063657-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000051genomeSc0000051:913776..916544 -
Properties
Property NameValue
GeneIDBlCUFF031167