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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000051:1503093..1510169+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00063550 ID=BlTCONS00063550|Name=BlTCONS00063550|organism=Branchiostoma lanceolatum|type=mRNA|length=7077bp|location=Sequence derived from alignment at Sc0000051:1503093..1510169+ (Branchiostoma lanceolatum)
ATGTAAAAGATTTAAAGCATGCGCAGCCATGCCATTTTGCTGTCTATCTA
AACCGGCAATGGTGGAAGAGTCCACTTTTTTGCTGGAGTAGAACAACTGG
TTCAACAAGACAGCGGCGACAAACATGCTAATCAACTAGACGATCGCATC
ATTATGCTAAATTAGAACTGAACTAAATTAGGAAATACTGTCTAGCGTTA
CGTATTATATAAAAAAAAATCTGGTCTAAAGACATCTGAACCCACGCACA
GAATGAATGGTATGTCCCTAGCCTGAAGGCAGACTCTCACATTCAGTTAA
GATAATGAGAGCGCCCCAAAATAACCTGCGCATCACCGCCTTTGTGTTAG
TCAGAATCTCGAGGACACCTGGCGTACCCTGGCACAGTGTTGCCCGGACA
CACCCTTCCTACGTCACGTAACTACCTACCGACGTCACAATAGACTACAC
TCACCAGTGCGTGAGGATTGGTCGATACAAAAATTAGATAAAGGACCGCC
CGGTAGGACAGAGGTAAAATAGAAGTGTACGGAGTACAGCTACAGCTGTG
TTTGGATAGTGCTAGGACGTCTCTGTTTGTTCTGTGTTTTGCTGCTCATC
CCGACCAAGAGAAGAAGAGTCAACATGTCGTACGGAGAGATGAGTGGAGG
CATGAAGTGTCTGAAGTATCTCCTGTTCCTGTTCAACCTGATTTTCTGGG
TAAGTGGAGTCTTTCGATGTCACAACAATGTCTGGCTGAAAAATGTAGTC
TAGTATCACTGACGCAAGCAACTCAAAATCGATCTGTAGTATCTACCATG
AAAGAAATAGTGAAAAAAAAGGCCAAAATAGACCCAAGGAGGTTAACCTC
CTTGATCAGAGAAAGGATCAGAGTTAACCGGCCCTCCAAATTGGCTACCT
GGGTATTAGTTTCTACAAGGAAAAGGAGGTTATATCGTCTTTGGTTTCTA
GGGCGGCTTACTCCTCGTTCTTTAGTTTGTTTTGGCCTCGAAGTTTCTGC
CAGTTTTAGTCCCGAGAGTAGTCTGTAGAAGAGAGACCAGACAATGTATG
AACAGACAGACTATGAGTCAAGGAATTGAGATTTTATAATTGCCCTGAGA
AACATGGGCACCAGGGATCTATATTCTTTTGTAATGTACACCCAGGTAAA
AAGAGGAATCGGAATTCAATTATAGCCTCGAGGTCGACAAAATTACACGT
CTTTGCTGTTATGCACGCAAGCCTTCTTTACTGTTTAGCTACAACAGAAA
ACATCGCTGAGAGGGGGAAGAAAAAGAAGTTTTCGGACAAAGTATTCACC
TGTGACTCTTCAGTAATTGTGACTTTGCGTACAAGGACGAAGGGGGAGCG
GCTCGTGTTCTATTTTACGGCAGTTTTGGAAATACAGCCTGACGGAAAAT
GGTGAAATAAGATTTAAGACATAGAGGTTGATATACGAAGATTCTTATTA
ACATTCGTCGCACCAAAATTGTACGATCGCGAACTATGGGTATTCTTGGG
ATAGTCGTGAATGTGTCGTACAACATGCAGCTGTCTCAGGACTGAAAAAT
ATCCTTGTCGGTGGTTGTTTCCGTTACATCCTTGTTTAAAATTCTACGAC
ACCAAAATCGTACGTATACGGGACCTACGACGAAATTATGTTACCGCACC
GTAAGGGAAGAAGGGTACGGGGAACAGCCGTGGGGGGGGGGGAGACAATG
CTTTTTCAAATATGTATTTCCTGCCACACACAACGTCCTGTCGTCTGTAC
ATACTTCACTCTCTGTTTGTGATAAACTTCTTTGGGAACTGACGACAATT
TCTTACAACCCGGATGCCAATTTTCTATAAATAATAACATACAATCATAA
CGAGGTGCGCTGTAATTTACCGGTATACGTGTGACTTCCCGACACATGAC
ATGGCACAGGCATGACTCAGGTGGACACAAAAGGATGCGTACGTCATTTG
ATTGACATATCCTTCGGACAATGGCGTAACGGTAACCCGCGGCAACATTT
CGTCGGCGACACAAAGAAAGCAATTTTCTCGTATGGATGGTCACGTAAGG
AACGTACACTTAGCATGATTAAGATTTTTGGGGCTATTCGTGGGGTCAAA
TGGGGCACGCAATGGAGTGCGAAATGAGGTCTGCTGCATTTGTTGACATG
CTTAGATCTTGACAACAGGACAAGAAAGGAAAATAGAAGTCGAACTTTGG
GTATGAAAATTTGTCAATTATTTTTCTGATCTTTATTCTTAAAAGCCAGG
ATCTAGGGGGGAAATGCCATGTCATTTCTTGGCGACCCCTCAAGGGCGGA
GCTGCTAGCATAGGCAATAGCAACGAAACAACGTGTATACATGTGTACCT
GTGGCAAAATTTCGTCGGCGACACAACAAAAATAATTTTCTCGTACGGAT
GGTCACGTAAGGAACGTACACTTACCATGATTGAGAATTTGAGGCTAAAC
GATTCGCTGAGGGTCAAATGAGGCACGCGATGAAGTGAGAAATGAGGATA
GGCCTGCAGCATTTGTTGGCGTGATCATGTGTTGACAAGAGGACAAGAAT
AGAAGATAGAAGTCAAACTTTGGACCTAAAAATTGGTGAATTATTTTTAT
GATCTTTATTCTTAAAAGCCAGGATCTAGGAGAAAAATTCCATGTCATTT
CTTGGCGACGCCTCAGGGGCGGAGCTGCTAGCATAGCTAGCAACGAAACA
ACGTATGAACCTGTGGCAACATTTCATTGGCGACTCAAAGAAAACAATTT
TCTTGTATGGATGGTCACGTAAGGAACGTACACTTAGCATGATTGAGAAT
TTGAGGCTGAGCGATTCGCTGAGGGTCAAATGAGGAACGCGATGAAGTGC
AAAATGAGGTCTGCTGCATTTGCTTACACAATTAGGTTTTGACAACAGTC
ACATAGGATGACAGAGACAAGACAGGAGAAAGGACAATAGCAGTCGAGAC
CAGTGGTATACAGAGCAAAGCTTTGGGTCTGAAAAAGTGTCAATAATTTT
TCCATCGTTATTGTTAAATGCCAGGATTCAGAGGAAAAAATTCCATGCCA
TTTCTTGGCGACGCCTCAGGCGCGGAGCTGCTAGGCATAGGCAATAGCAA
TGAAATAAAAGAAAACGTTATCAACGTTTCAGCCTTTTCAACTGCGCCAA
TCTTTTTTTGCTTTAAACCCGACGTGACTCTAAAAACATAGTATAAGACC
CGAGTATATGTTCTGATCAAGGAGGTTTTATCTGATTAAGGCCTCTTTGT
TCTGTTAAAACAATAAAGAAGTGTGGGTATCTGGGTGCTAGTCGACAAAA
GCAGAGCGCAAGACCCGAGTATATGCTCTGATCAAGGAGGTATTATCTGA
TTAAGGCCTCTTTGTTCTGTTAAAACAATAAAGAAGTGCAACTTTCCTTC
TCCCCCCATAGATCGCAGGCGTGGGTTTGATCGGTGTGGGTATCTGGGTG
CTAGTCGACAAAAGCAGAGCGCAAGACCCGAGGATATGTTCTGGTCAAGG
AGGTTTTATCGGATTAAAACTTCCTTTGTTCTGATAAAACAATAAAGTGA
AATGTGAAACGTTCCTTCTCCCCCATAGATCGCAGGCGTGGGTTTGATCG
GCGTGGGCATCTGGGTGCTTGTCGACACCGGAACCTACAACATCATGAAG
CTGGCGGAGGTGAGCACCTTCACGCTGTACGTGGGAGGGTACGTGCTGAT
CGGCGCCGGCGTCGTCACCATGATCGTCGGCTTCCTGGGCTGCTTTGGCG
CCATCAAGGAGAACAGCTGCCTGCTGGGAACGGTTGGTTGTAGTTATGAT
TCTCCGCGCTAGGTGGCGTGGTAATCTATGTGTGTGTATCTCCAACTGTC
ATCTTCCAGGAACAAAATATGAAATATGACTGTTTTACATGACTATGTAT
ATAAATGCTATTCGTCAAGAAGCAAATGATATTTACTTAGATAAATAAGT
TCTAAACTTCGCTGTAAGGACTAAAAACTACCTGTGTCTGTTCTCCATTT
ATTTGACAGGCAAGCTTGAAACATAAACTTTAAAATCTTGAAAAATAGCT
TTTGTGAAACCCGGTTATTGTTTTACTATCACGATTCAGTGATGGCTCTT
TTATGATATTAAGGTACAGAATTTCACTTACAATGTTTTCTTTACATATG
TGATAATAATTTTTCTCTTTCTGTTTCTCTCTCTAGTTCTTCATTTGCCT
GCTGCTTCTGTTGTGCTTGGAGATCGGTATTGGCATCTACGCCGCCGTGC
AGAAAGACCAGGTGAGTAAACTACGCTCCTTGCGACATTATGCCGAACTG
CACGCATAATGTCTGCTCGAACAACGACGTGTTGCTGAACACTCAAGTGC
CCTATACAAAACATCGTTTTCCATACCATGTTTTAGTGACAGTCTTTCAT
TTTGCATTTGTTTTGCATCTGTTGTTTGTTTGTTTTTGTTCTCATTTTTT
GAAAATTCTTTATTTCAGGCACCAACTGGTCTTCAGTAAAAGCACACGTA
AACAACAACGAATCTTTGCTTATCTTTTCGTGGTTAATTGTTTTTTCAGT
TCTATGGTGTGGTTGAGAAGGCGTTGGGCGCCCTGTCCAAGACAGACTAT
GCCGGCAGGGACGAGGCTTCGAGGAAAATCATCGACTTCGTGCAGGAAAA
CGTGAGTAGCCAGGGTGATCGTTATCTATATCTATATGAGTATTGCTGAC
TGTACTGCCCATTCCAATAATCCAATTCGTAGATTCGAGTACGCATGGGC
AGTGTCAAAGGTGAAGGCCCCTGGCTTGTAAACAGTTGTCGCAGTTGTTG
TCTCGAGCATTGTCTCGATTTGCATACAATGCCAGACGGGGTTTGTTTAC
GTCTTAGGGGCCTTCACCTTTGACACAGCATATACCTACTTGAATCTACG
AATGGGCTTATTGCTTCATTCGAGGCAATATGTCCCTCGAAAGACTAGTA
CGCCAAAAAACGCAAGAGCCGTCGCTTTGCCAAAGCACCTAAAATCCCAC
ACAGAAATGGAATGATATTCGATGTAGAAATTCAACGTTTGACATTGATC
TCAGTAATAGTAACTAAAACTTGACAATGAGTTTCTTTTTCATGTCCCTT
TCTACATCATACTTTTATACATGTTTGTCAGAGATAACGTTACGCCGGGT
ATTCTGTATAGGAGAAGAGCAGGGTGTAGAGTTTAGGTTTTGTGCTCATG
TTTACGGATCCGATTTTCATGCTGTTATTTTTTTTTGTCAGCTGGAATGT
TGCGGCATGAACTCCACCACCAACTGGAACCCTAAGCCAAAGTCCTGCGC
ATGCACCAAAACTGTCAGCCACTGTGTTGCCGGGAACTGGAATCGGGTGA
GTTCAGAATAGCTTTTATCATGTTTGGCAAAGTCAAGGCTTCCTTAGCGA
CTTAATCCATGTAGATACAATGCTAATATCATCGCTTGTTTGTTTGACAA
AGATTTCAAACCAACAGTCGCACAAAATACCCAAACAAATCGGAATTGAA
ATACTTCTTATAGATTCAAACTACCGAGAAAGAACTGTTATTTTGTAATT
TCAACACTGGTTGATGCAGATTTAACAAGATTTTATCAAAAAAGAATTCC
ATAGGAATGCGTTCGTGGAATTCCTAGAATATTTACAACACCAATCGTAG
TACTATACTAACGGCTCCGCCCCTAAGGCGTCGCAAAAATCTATTGCAGC
ACAGGTCTCAATCGGTGGTAGAAAGACGGCCTTGACCCATAGACTATATA
ACGTTAATTTCTAACCCATTTTGTCCCCTCTCTCTCTGCAGCCGTGTAAC
GTACAGGTGCGGATGTTCCTCATGAACAGTGCCGGCATCATTGCCGGAGT
AGCCTGCGGCATCGGTGCCATTATGGTGAGTCCAGAATCAACTCTTCAAA
CACATTTAGCTTAAACGTTTCTAGGCGTTGATGAAGGTTAGACATCTAGG
TGATAAGATAAGCCAAAAAATAGTTACTCAAGCAACTGGATAACATTTGA
CTGTTTCAAAATTTATCCAGTTGCTTGAGGAACTATTTTGGCTTAAACGT
TTTGAGATTGTTTTCACTTGTCTCCTATTTCTGTTTCCAACTGGAGGTGC
TTTTATCCGGACAACTTATTTGTTAATAGGATTTTGTGGTGGCATTGATA
TAGGCTATCATCACAAATTGAATCTGGCCCACATTGTCATTGCTGAATGT
TCATATATTCCACGAAACATGATTCTGAAAAAGATACTTTATTCACAACA
GCGTTTCCGACGCATTCCTGGTAATTGCACAACGATAATTATCATGGTAC
CGGTGTGGTGATGATCCCAAAAGGATTGACATGGAACTTTCTGGCTATCT
CAGAATCTATAGGAAGAAACATTCGTCATTATGTATTTTACCTTATCTGA
TATCACAGGGGGTTGTTTGTTTATTTTCTGGTTATTTTGAATATTTGCCT
ATAACCATATTTTCCCCCCTTTTTTCAGCTGATCGGAATGGTGCTGTCCT
GTTGTCTGATCCGGAGCAAAGGAGGGTCGTCCGAGGTAGTGTAGCTGCCG
TACCGGAAATATATGACACGTCACATCCTGTATAATATAGCAGAACCCTT
TCTACTATTTTTGCCAGATATGTATAAATCCTACTGGCACAGTTGATAAT
ACAATACAAGTTCGTAAGTCAGTAACTACTTTAATGTATACAATGACTTG
CCATTTTCTTCATTTGAGCGAAGCTTATTTTGTTTATATTGCCATGCAGT
CGTAGGTCGATTCAATTATTTTAAAATCATAGATAGAGATCTATGTACAT
AGATTAGAGATAACTTGTGTTTTTTTACGTTGTAACTTTCTTTTCAGAAT
ATTATTTCAGTTTCTTTTTTGCACTGAGTCAAATTTTTATCTATAAGCTA
ATGAACTGAGCAGATAACGCCGAATGGCCCTGAATAACTGTACATACAAA
TATTTTTAACATGCATTTCTATAGTAGATTCAACCTGCACTACAGTTTAA
ATAAAAGCAAAGCTCCTGCTTACGACAAAATACATGCAAAACTCGTGTGA
TTTTCTTCTGTGAAATAAATATATATG Coding sequence (CDS) from alignment at Sc0000051:1503093..1510169+ >BlTCONS00063550 ID=BlTCONS00063550|Name=BlTCONS00063550|organism=Branchiostoma lanceolatum|type=CDS|length=711bp|location=Sequence derived from alignment at Sc0000051:1503093..1510169+ (Branchiostoma lanceolatum)
ATGTCGTACGGAGAGATGAGTGGAGGCATGAAGTGTCTGAAGTATCTCCT
GTTCCTGTTCAACCTGATTTTCTGGATCGCAGGCGTGGGTTTGATCGGCG
TGGGCATCTGGGTGCTTGTCGACACCGGAACCTACAACATCATGAAGCTG
GCGGAGGTGAGCACCTTCACGCTGTACGTGGGAGGGTACGTGCTGATCGG
CGCCGGCGTCGTCACCATGATCGTCGGCTTCCTGGGCTGCTTTGGCGCCA
TCAAGGAGAACAGCTGCCTGCTGGGAACGTTCTTCATTTGCCTGCTGCTT
CTGTTGTGCTTGGAGATCGGTATTGGCATCTACGCCGCCGTGCAGAAAGA
CCAGTTCTATGGTGTGGTTGAGAAGGCGTTGGGCGCCCTGTCCAAGACAG
ACTATGCCGGCAGGGACGAGGCTTCGAGGAAAATCATCGACTTCGTGCAG
GAAAACCTGGAATGTTGCGGCATGAACTCCACCACCAACTGGAACCCTAA
GCCAAAGTCCTGCGCATGCACCAAAACTGTCAGCCACTGTGTTGCCGGGA
ACTGGAATCGGCCGTGTAACGTACAGGTGCGGATGTTCCTCATGAACAGT
GCCGGCATCATTGCCGGAGTAGCCTGCGGCATCGGTGCCATTATGCTGAT
CGGAATGGTGCTGTCCTGTTGTCTGATCCGGAGCAAAGGAGGGTCGTCCG
AGGTAGTGTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00063550-exon-Sc0000051-1564993656:1503093..1503791 | BlTCONS00063550-exon-Sc0000051-1564993656:1503093..1503791 | Branchiostoma lanceolatum | exon |
| BlTCONS00063550-exon-Sc0000051-1564993656:1506671..1506874 | BlTCONS00063550-exon-Sc0000051-1564993656:1506671..1506874 | Branchiostoma lanceolatum | exon |
| BlTCONS00063550-exon-Sc0000051-1564993656:1507279..1507353 | BlTCONS00063550-exon-Sc0000051-1564993656:1507279..1507353 | Branchiostoma lanceolatum | exon |
| BlTCONS00063550-exon-Sc0000051-1564993656:1507642..1507743 | BlTCONS00063550-exon-Sc0000051-1564993656:1507642..1507743 | Branchiostoma lanceolatum | exon |
| BlTCONS00063550-exon-Sc0000051-1564993656:1508334..1508438 | BlTCONS00063550-exon-Sc0000051-1564993656:1508334..1508438 | Branchiostoma lanceolatum | exon |
| BlTCONS00063550-exon-Sc0000051-1564993656:1508884..1508967 | BlTCONS00063550-exon-Sc0000051-1564993656:1508884..1508967 | Branchiostoma lanceolatum | exon |
| BlTCONS00063550-exon-Sc0000051-1564993656:1509571..1510169 | BlTCONS00063550-exon-Sc0000051-1564993656:1509571..1510169 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000051 | genome | Sc0000051:1503093..1510169 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF031104 |
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