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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000051:1502863..1510169+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00063549 ID=BlTCONS00063549|Name=BlTCONS00063549|organism=Branchiostoma lanceolatum|type=mRNA|length=7307bp|location=Sequence derived from alignment at Sc0000051:1502863..1510169+ (Branchiostoma lanceolatum)
GTCTGTTACGCACTAACGGACAACGCTTTATACATCACGTACGGGTGAGT
GTCTTCTGTTATGACGTCTTAAGGTAATTACGACTTTATTCTAGTCTTAA
ATCCGTTACAAATAAATAATGGTATAGGAAAAAAGAAACTATATTGTTCC
GTACAATTTCCACGTACGCTTTTGTTGCTGAAGATAAACACTTGTAGAAC
ATGTAAAAGATTAAAAGCATGCGCAGCNACATGTAAAAGATTTAAAGCAT
GCGCAGCCATGCCATTTTGCTGTCTATCTAAACCGGCAATGGTGGAAGAG
TCCACTTTTTTGCTGGAGTAGAACAACTGGTTCAACAAGACAGCGGCGAC
AAACATGCTAATCAACTAGACGATCGCATCATTATGCTAAATTAGAACTG
AACTAAATTAGGAAATACTGTCTAGCGTTACGTATTATATAAAAAAAAAT
CTGGTCTAAAGACATCTGAACCCACGCACAGAATGAATGGTATGTCCCTA
GCCTGAAGGCAGACTCTCACATTCAGTTAAGATAATGAGAGCGCCCCAAA
ATAACCTGCGCATCACCGCCTTTGTGTTAGTCAGAATCTCGAGGACACCT
GGCGTACCCTGGCACAGTGTTGCCCGGACACACCCTTCCTACGTCACGTA
ACTACCTACCGACGTCACAATAGACTACACTCACCAGTGCGTGAGGATTG
GTCGATACAAAAATTAGATAAAGGACCGCCCGGTAGGACAGAGGTAAAAT
AGAAGTGTACGGAGTACAGCTACAGCTGTGTTTGGATAGTGCTAGGACGT
CTCTGTTTGTTCTGTGTTTTGCTGCTCATCCCGACCAAGAGAAGAAGAGT
CAACATGTCGTACGGAGAGATGAGTGGAGGCATGAAGTGTCTGAAGTATC
TCCTGTTCCTGTTCAACCTGATTTTCTGGGTAAGTGGAGTCTTTCGATGT
CACAACAATGTCTGGCTGAAAAATGTAGTCTAGTATCACTGACGCAAGCA
ACTCAAAATCGATCTGTAGTATCTACCATGAAAGAAATAGTGAAAAAAAA
GGCCAAAATAGACCCAAGGAGGTTAACCTCCTTGATCAGAGAAAGGATCA
GAGTTAACCGGCCCTCCAAATTGGCTACCTGGGTATTAGTTTCTACAAGG
AAAAGGAGGTTATATCGTCTTTGGTTTCTAGGGCGGCTTACTCCTCGTTC
TTTAGTTTGTTTTGGCCTCGAAGTTTCTGCCAGTTTTAGTCCCGAGAGTA
GTCTGTAGAAGAGAGACCAGACAATGTATGAACAGACAGACTATGAGTCA
AGGAATTGAGATTTTATAATTGCCCTGAGAAACATGGGCACCAGGGATCT
ATATTCTTTTGTAATGTACACCCAGGTAAAAAGAGGAATCGGAATTCAAT
TATAGCCTCGAGGTCGACAAAATTACACGTCTTTGCTGTTATGCACGCAA
GCCTTCTTTACTGTTTAGCTACAACAGAAAACATCGCTGAGAGGGGGAAG
AAAAAGAAGTTTTCGGACAAAGTATTCACCTGTGACTCTTCAGTAATTGT
GACTTTGCGTACAAGGACGAAGGGGGAGCGGCTCGTGTTCTATTTTACGG
CAGTTTTGGAAATACAGCCTGACGGAAAATGGTGAAATAAGATTTAAGAC
ATAGAGGTTGATATACGAAGATTCTTATTAACATTCGTCGCACCAAAATT
GTACGATCGCGAACTATGGGTATTCTTGGGATAGTCGTGAATGTGTCGTA
CAACATGCAGCTGTCTCAGGACTGAAAAATATCCTTGTCGGTGGTTGTTT
CCGTTACATCCTTGTTTAAAATTCTACGACACCAAAATCGTACGTATACG
GGACCTACGACGAAATTATGTTACCGCACCGTAAGGGAAGAAGGGTACGG
GGAACAGCCGTGGGGGGGGGGGAGACAATGCTTTTTCAAATATGTATTTC
CTGCCACACACAACGTCCTGTCGTCTGTACATACTTCACTCTCTGTTTGT
GATAAACTTCTTTGGGAACTGACGACAATTTCTTACAACCCGGATGCCAA
TTTTCTATAAATAATAACATACAATCATAACGAGGTGCGCTGTAATTTAC
CGGTATACGTGTGACTTCCCGACACATGACATGGCACAGGCATGACTCAG
GTGGACACAAAAGGATGCGTACGTCATTTGATTGACATATCCTTCGGACA
ATGGCGTAACGGTAACCCGCGGCAACATTTCGTCGGCGACACAAAGAAAG
CAATTTTCTCGTATGGATGGTCACGTAAGGAACGTACACTTAGCATGATT
AAGATTTTTGGGGCTATTCGTGGGGTCAAATGGGGCACGCAATGGAGTGC
GAAATGAGGTCTGCTGCATTTGTTGACATGCTTAGATCTTGACAACAGGA
CAAGAAAGGAAAATAGAAGTCGAACTTTGGGTATGAAAATTTGTCAATTA
TTTTTCTGATCTTTATTCTTAAAAGCCAGGATCTAGGGGGGAAATGCCAT
GTCATTTCTTGGCGACCCCTCAAGGGCGGAGCTGCTAGCATAGGCAATAG
CAACGAAACAACGTGTATACATGTGTACCTGTGGCAAAATTTCGTCGGCG
ACACAACAAAAATAATTTTCTCGTACGGATGGTCACGTAAGGAACGTACA
CTTACCATGATTGAGAATTTGAGGCTAAACGATTCGCTGAGGGTCAAATG
AGGCACGCGATGAAGTGAGAAATGAGGATAGGCCTGCAGCATTTGTTGGC
GTGATCATGTGTTGACAAGAGGACAAGAATAGAAGATAGAAGTCAAACTT
TGGACCTAAAAATTGGTGAATTATTTTTATGATCTTTATTCTTAAAAGCC
AGGATCTAGGAGAAAAATTCCATGTCATTTCTTGGCGACGCCTCAGGGGC
GGAGCTGCTAGCATAGCTAGCAACGAAACAACGTATGAACCTGTGGCAAC
ATTTCATTGGCGACTCAAAGAAAACAATTTTCTTGTATGGATGGTCACGT
AAGGAACGTACACTTAGCATGATTGAGAATTTGAGGCTGAGCGATTCGCT
GAGGGTCAAATGAGGAACGCGATGAAGTGCAAAATGAGGTCTGCTGCATT
TGCTTACACAATTAGGTTTTGACAACAGTCACATAGGATGACAGAGACAA
GACAGGAGAAAGGACAATAGCAGTCGAGACCAGTGGTATACAGAGCAAAG
CTTTGGGTCTGAAAAAGTGTCAATAATTTTTCCATCGTTATTGTTAAATG
CCAGGATTCAGAGGAAAAAATTCCATGCCATTTCTTGGCGACGCCTCAGG
CGCGGAGCTGCTAGGCATAGGCAATAGCAATGAAATAAAAGAAAACGTTA
TCAACGTTTCAGCCTTTTCAACTGCGCCAATCTTTTTTTGCTTTAAACCC
GACGTGACTCTAAAAACATAGTATAAGACCCGAGTATATGTTCTGATCAA
GGAGGTTTTATCTGATTAAGGCCTCTTTGTTCTGTTAAAACAATAAAGAA
GTGTGGGTATCTGGGTGCTAGTCGACAAAAGCAGAGCGCAAGACCCGAGT
ATATGCTCTGATCAAGGAGGTATTATCTGATTAAGGCCTCTTTGTTCTGT
TAAAACAATAAAGAAGTGCAACTTTCCTTCTCCCCCCATAGATCGCAGGC
GTGGGTTTGATCGGTGTGGGTATCTGGGTGCTAGTCGACAAAAGCAGAGC
GCAAGACCCGAGGATATGTTCTGGTCAAGGAGGTTTTATCGGATTAAAAC
TTCCTTTGTTCTGATAAAACAATAAAGTGAAATGTGAAACGTTCCTTCTC
CCCCATAGATCGCAGGCGTGGGTTTGATCGGCGTGGGCATCTGGGTGCTT
GTCGACACCGGAACCTACAACATCATGAAGCTGGCGGAGGTGAGCACCTT
CACGCTGTACGTGGGAGGGTACGTGCTGATCGGCGCCGGCGTCGTCACCA
TGATCGTCGGCTTCCTGGGCTGCTTTGGCGCCATCAAGGAGAACAGCTGC
CTGCTGGGAACGGTTGGTTGTAGTTATGATTCTCCGCGCTAGGTGGCGTG
GTAATCTATGTGTGTGTATCTCCAACTGTCATCTTCCAGGAACAAAATAT
GAAATATGACTGTTTTACATGACTATGTATATAAATGCTATTCGTCAAGA
AGCAAATGATATTTACTTAGATAAATAAGTTCTAAACTTCGCTGTAAGGA
CTAAAAACTACCTGTGTCTGTTCTCCATTTATTTGACAGGCAAGCTTGAA
ACATAAACTTTAAAATCTTGAAAAATAGCTTTTGTGAAACCCGGTTATTG
TTTTACTATCACGATTCAGTGATGGCTCTTTTATGATATTAAGGTACAGA
ATTTCACTTACAATGTTTTCTTTACATATGTGATAATAATTTTTCTCTTT
CTGTTTCTCTCTCTAGTTCTTCATTTGCCTGCTGCTTCTGTTGTGCTTGG
AGATCGGTATTGGCATCTACGCCGCCGTGCAGAAAGACCAGGTGAGTAAA
CTACGCTCCTTGCGACATTATGCCGAACTGCACGCATAATGTCTGCTCGA
ACAACGACGTGTTGCTGAACACTCAAGTGCCCTATACAAAACATCGTTTT
CCATACCATGTTTTAGTGACAGTCTTTCATTTTGCATTTGTTTTGCATCT
GTTGTTTGTTTGTTTTTGTTCTCATTTTTTGAAAATTCTTTATTTCAGGC
ACCAACTGGTCTTCAGTAAAAGCACACGTAAACAACAACGAATCTTTGCT
TATCTTTTCGTGGTTAATTGTTTTTTCAGTTCTATGGTGTGGTTGAGAAG
GCGTTGGGCGCCCTGTCCAAGACAGACTATGCCGGCAGGGACGAGGCTTC
GAGGAAAATCATCGACTTCGTGCAGGAAAACGTGAGTAGCCAGGGTGATC
GTTATCTATATCTATATGAGTATTGCTGACTGTACTGCCCATTCCAATAA
TCCAATTCGTAGATTCGAGTACGCATGGGCAGTGTCAAAGGTGAAGGCCC
CTGGCTTGTAAACAGTTGTCGCAGTTGTTGTCTCGAGCATTGTCTCGATT
TGCATACAATGCCAGACGGGGTTTGTTTACGTCTTAGGGGCCTTCACCTT
TGACACAGCATATACCTACTTGAATCTACGAATGGGCTTATTGCTTCATT
CGAGGCAATATGTCCCTCGAAAGACTAGTACGCCAAAAAACGCAAGAGCC
GTCGCTTTGCCAAAGCACCTAAAATCCCACACAGAAATGGAATGATATTC
GATGTAGAAATTCAACGTTTGACATTGATCTCAGTAATAGTAACTAAAAC
TTGACAATGAGTTTCTTTTTCATGTCCCTTTCTACATCATACTTTTATAC
ATGTTTGTCAGAGATAACGTTACGCCGGGTATTCTGTATAGGAGAAGAGC
AGGGTGTAGAGTTTAGGTTTTGTGCTCATGTTTACGGATCCGATTTTCAT
GCTGTTATTTTTTTTTGTCAGCTGGAATGTTGCGGCATGAACTCCACCAC
CAACTGGAACCCTAAGCCAAAGTCCTGCGCATGCACCAAAACTGTCAGCC
ACTGTGTTGCCGGGAACTGGAATCGGGTGAGTTCAGAATAGCTTTTATCA
TGTTTGGCAAAGTCAAGGCTTCCTTAGCGACTTAATCCATGTAGATACAA
TGCTAATATCATCGCTTGTTTGTTTGACAAAGATTTCAAACCAACAGTCG
CACAAAATACCCAAACAAATCGGAATTGAAATACTTCTTATAGATTCAAA
CTACCGAGAAAGAACTGTTATTTTGTAATTTCAACACTGGTTGATGCAGA
TTTAACAAGATTTTATCAAAAAAGAATTCCATAGGAATGCGTTCGTGGAA
TTCCTAGAATATTTACAACACCAATCGTAGTACTATACTAACGGCTCCGC
CCCTAAGGCGTCGCAAAAATCTATTGCAGCACAGGTCTCAATCGGTGGTA
GAAAGACGGCCTTGACCCATAGACTATATAACGTTAATTTCTAACCCATT
TTGTCCCCTCTCTCTCTGCAGCCGTGTAACGTACAGGTGCGGATGTTCCT
CATGAACAGTGCCGGCATCATTGCCGGAGTAGCCTGCGGCATCGGTGCCA
TTATGGTGAGTCCAGAATCAACTCTTCAAACACATTTAGCTTAAACGTTT
CTAGGCGTTGATGAAGGTTAGACATCTAGGTGATAAGATAAGCCAAAAAA
TAGTTACTCAAGCAACTGGATAACATTTGACTGTTTCAAAATTTATCCAG
TTGCTTGAGGAACTATTTTGGCTTAAACGTTTTGAGATTGTTTTCACTTG
TCTCCTATTTCTGTTTCCAACTGGAGGTGCTTTTATCCGGACAACTTATT
TGTTAATAGGATTTTGTGGTGGCATTGATATAGGCTATCATCACAAATTG
AATCTGGCCCACATTGTCATTGCTGAATGTTCATATATTCCACGAAACAT
GATTCTGAAAAAGATACTTTATTCACAACAGCGTTTCCGACGCATTCCTG
GTAATTGCACAACGATAATTATCATGGTACCGGTGTGGTGATGATCCCAA
AAGGATTGACATGGAACTTTCTGGCTATCTCAGAATCTATAGGAAGAAAC
ATTCGTCATTATGTATTTTACCTTATCTGATATCACAGGGGGTTGTTTGT
TTATTTTCTGGTTATTTTGAATATTTGCCTATAACCATATTTTCCCCCCT
TTTTTCAGCTGATCGGAATGGTGCTGTCCTGTTGTCTGATCCGGAGCAAA
GGAGGGTCGTCCGAGGTAGTGTAGCTGCCGTACCGGAAATATATGACACG
TCACATCCTGTATAATATAGCAGAACCCTTTCTACTATTTTTGCCAGATA
TGTATAAATCCTACTGGCACAGTTGATAATACAATACAAGTTCGTAAGTC
AGTAACTACTTTAATGTATACAATGACTTGCCATTTTCTTCATTTGAGCG
AAGCTTATTTTGTTTATATTGCCATGCAGTCGTAGGTCGATTCAATTATT
TTAAAATCATAGATAGAGATCTATGTACATAGATTAGAGATAACTTGTGT
TTTTTTACGTTGTAACTTTCTTTTCAGAATATTATTTCAGTTTCTTTTTT
GCACTGAGTCAAATTTTTATCTATAAGCTAATGAACTGAGCAGATAACGC
CGAATGGCCCTGAATAACTGTACATACAAATATTTTTAACATGCATTTCT
ATAGTAGATTCAACCTGCACTACAGTTTAAATAAAAGCAAAGCTCCTGCT
TACGACAAAATACATGCAAAACTCGTGTGATTTTCTTCTGTGAAATAAAT
ATATATG Coding sequence (CDS) from alignment at Sc0000051:1502863..1510169+ >BlTCONS00063549 ID=BlTCONS00063549|Name=BlTCONS00063549|organism=Branchiostoma lanceolatum|type=CDS|length=711bp|location=Sequence derived from alignment at Sc0000051:1502863..1510169+ (Branchiostoma lanceolatum)
ATGTCGTACGGAGAGATGAGTGGAGGCATGAAGTGTCTGAAGTATCTCCT
GTTCCTGTTCAACCTGATTTTCTGGATCGCAGGCGTGGGTTTGATCGGCG
TGGGCATCTGGGTGCTTGTCGACACCGGAACCTACAACATCATGAAGCTG
GCGGAGGTGAGCACCTTCACGCTGTACGTGGGAGGGTACGTGCTGATCGG
CGCCGGCGTCGTCACCATGATCGTCGGCTTCCTGGGCTGCTTTGGCGCCA
TCAAGGAGAACAGCTGCCTGCTGGGAACGTTCTTCATTTGCCTGCTGCTT
CTGTTGTGCTTGGAGATCGGTATTGGCATCTACGCCGCCGTGCAGAAAGA
CCAGTTCTATGGTGTGGTTGAGAAGGCGTTGGGCGCCCTGTCCAAGACAG
ACTATGCCGGCAGGGACGAGGCTTCGAGGAAAATCATCGACTTCGTGCAG
GAAAACCTGGAATGTTGCGGCATGAACTCCACCACCAACTGGAACCCTAA
GCCAAAGTCCTGCGCATGCACCAAAACTGTCAGCCACTGTGTTGCCGGGA
ACTGGAATCGGCCGTGTAACGTACAGGTGCGGATGTTCCTCATGAACAGT
GCCGGCATCATTGCCGGAGTAGCCTGCGGCATCGGTGCCATTATGCTGAT
CGGAATGGTGCTGTCCTGTTGTCTGATCCGGAGCAAAGGAGGGTCGTCCG
AGGTAGTGTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00063549-exon-Sc0000051-1564993656:1502863..1502906 | BlTCONS00063549-exon-Sc0000051-1564993656:1502863..1502906 | Branchiostoma lanceolatum | exon |
| BlTCONS00063549-exon-Sc0000051-1564993656:1503443..1503791 | BlTCONS00063549-exon-Sc0000051-1564993656:1503443..1503791 | Branchiostoma lanceolatum | exon |
| BlTCONS00063549-exon-Sc0000051-1564993656:1506671..1506874 | BlTCONS00063549-exon-Sc0000051-1564993656:1506671..1506874 | Branchiostoma lanceolatum | exon |
| BlTCONS00063549-exon-Sc0000051-1564993656:1507279..1507353 | BlTCONS00063549-exon-Sc0000051-1564993656:1507279..1507353 | Branchiostoma lanceolatum | exon |
| BlTCONS00063549-exon-Sc0000051-1564993656:1507642..1507743 | BlTCONS00063549-exon-Sc0000051-1564993656:1507642..1507743 | Branchiostoma lanceolatum | exon |
| BlTCONS00063549-exon-Sc0000051-1564993656:1508334..1508438 | BlTCONS00063549-exon-Sc0000051-1564993656:1508334..1508438 | Branchiostoma lanceolatum | exon |
| BlTCONS00063549-exon-Sc0000051-1564993656:1508884..1508967 | BlTCONS00063549-exon-Sc0000051-1564993656:1508884..1508967 | Branchiostoma lanceolatum | exon |
| BlTCONS00063549-exon-Sc0000051-1564993656:1509571..1510169 | BlTCONS00063549-exon-Sc0000051-1564993656:1509571..1510169 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000051 | genome | Sc0000051:1502863..1510169 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF031104 |
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