BlTCONS00063259 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00063259
Unique NameBlTCONS00063259
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000050:1819480..1821495-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00063259 ID=BlTCONS00063259|Name=BlTCONS00063259|organism=Branchiostoma lanceolatum|type=mRNA|length=2016bp|location=Sequence derived from alignment at Sc0000050:1819480..1821495- (Branchiostoma lanceolatum)
CCTGCGGACACGAACGGATCGTTTCCGTGTTTATCCGCTATTTTTTATTG ATTTGTTAGTTGATTTCCGAGTATATTTCGATTAAAAAATGGCACAGTCT ACTTGCCAATCTGAGAGAGTCAGCTGGTTGAGAAAAGACCGCCTTGCCAG GTATGTTAGCAGCACTTGTTTTGATTGCGATTTGCCGTCTTAAACACTTC AACTGTGTTACAGTGATGGAATCTGAACGCTTGTTCATACCGCACGAGTT TGAGTGTGTTTTCCGGTTAGTAACAGCGCAGAAAGTTCTGAACGATATGT CGGCATTTTTCATTGGACATTTCTCTTCAGCATATAATGATGAAAACTTT CTTAATCAGCAATTGTATCAGACATAGTATATGGCGGTTTCTGATACTTA TCGACTTTTCACGGAAATTAATCTACTCTAGTTAAAGAAGACCATGAAGT TCGGGATGAGCAAATTTTCTTCTTTTGTTGGTTGCCTATAAAATATGACA GAAAGCGAAAACCAGGTATTGAAATACTGATGTACAGTAGCTAGTATATA TTTTGCGCACTTTATAGGTCCACTCACGTGAGAAAACTCGTGAGCAGTTT CGAGGCCCTGACCAGCCAGCCCCCTCATGCCTACACCGAAGCCGCAGGCA TCACACCCGTCCAGGCAATGCCTGATGATGCCGACAAAGTCATGATGAGG TACGTACGTTCGCAAATAAAGTTATGTTTTTTGTGCCATTTGTGGGTTTG TCTATCGGTTTGTTTATGAGCAGCATACTTCGTGAAGTTATGGCTGTATC TGTAAGATATTTGGTATGTAGATGGTTTTAAGCAAAATGAAGGTTTGATC ATGGGCGTCCCTAACGAATTTCCATGGTGCCAATGCTGCGCGTTTATGTA ATCTTGAGGAAAGAATTATATCATAGCTGCACAAAAGAAAACAATTTTTT TCGGTACCATTCGCGATCGTGTGTTTGTTTGTGGGGTGGTTTGTGGGCAT CGTAACTCGAGAAGCTATGAATGGATCCCTAAGATATTTGCTATGTGAGT AGGTATCAGCAAAACTAATGTCAAGTAAGGTTTGTTCATGAGCCTCATAT CCGTTGTCTATGGTACAGATGGTTTCATTTTATGTTATCTGAAAGATTTG AGCATCTCAAAACCGCACAGAAAATTCCACCCTTACTCGTCCTCTTGTTA GAATAGAAGCATATAGGATTGCGTCCACAAGGCCGATGTGTGATTTTGAC CTTCCTTTCTAAACACAGACGTTCAGTTAAAGACATCAAGGACGAGCTGG AGGGAAAGACAACCTCTACTCCGTCAGAAGCTAGTGTGGTTAACGTCAGA CCCCAGAAGCCCCCACGGGCCATGCTGCTGCATGATGATACTTCTCCGAA GTCTGCGAGTACCACGGAACCGCAGAAACCCCTCTACACCCAGTCCCTGG CTGACACAGCTGTCCAGACGGCGGCTGCCGTAAAGCAAGTGGAACCAGCC AGTGCCCAGCCTCTGGACGTCACAGACGTAAAACCACCCAAACCCCACCT TATTGGCGACACTGCTGGTGCGACGTCGGATGACGTGGAGCCTGACGCAG AAGATCTTCTCCGCACCCTGGTTCTGGGCGATGAGGCTGGCGACACGAAG GTTACGGTGAAGTCGTCCCGTACCCTGTCTCTGGTCCGTAATGATGCCCA GAGGGCCCATGCCGTGAAGCCACCCAGCACCCAGGCTGTGAGCAAAGATG CCCAGATGGCCCTTGCCGTGAGGCAAGAGGAGCTACTCCGCACCCTTCTG ATGGGTCTGCCGGACGAAACGTCCCAGGCGACCATCACCGTGACGCCACG GAAGCCTGTTCGCAGGCAGTCTCTAGCCGTGAAGCTGGTGGAGCCAGCCC CCACCCAGTCTCTGACCGACGCAACCACAAGGGCCCTGGAAAGCGCTCCC GTCCTTCAGCCGCCACAGAAGCCATCCAGGTGCAGGGACTACGTCATGTA CAGGAATAACTTCGGT

Coding sequence (CDS) from alignment at Sc0000050:1819480..1821495-

>BlTCONS00063259 ID=BlTCONS00063259|Name=BlTCONS00063259|organism=Branchiostoma lanceolatum|type=CDS|length=942bp|location=Sequence derived from alignment at Sc0000050:1819480..1821495- (Branchiostoma lanceolatum)
ATGGCACAGTCTACTTGCCAATCTGAGAGAGTCAGCTGGTTGAGAAAAGA
CCGCCTTGCCAGGTCCACTCACGTGAGAAAACTCGTGAGCAGTTTCGAGG
CCCTGACCAGCCAGCCCCCTCATGCCTACACCGAAGCCGCAGGCATCACA
CCCGTCCAGGCAATGCCTGATGATGCCGACAAAGTCATGATGAGACGTTC
AGTTAAAGACATCAAGGACGAGCTGGAGGGAAAGACAACCTCTACTCCGT
CAGAAGCTAGTGTGGTTAACGTCAGACCCCAGAAGCCCCCACGGGCCATG
CTGCTGCATGATGATACTTCTCCGAAGTCTGCGAGTACCACGGAACCGCA
GAAACCCCTCTACACCCAGTCCCTGGCTGACACAGCTGTCCAGACGGCGG
CTGCCGTAAAGCAAGTGGAACCAGCCAGTGCCCAGCCTCTGGACGTCACA
GACGTAAAACCACCCAAACCCCACCTTATTGGCGACACTGCTGGTGCGAC
GTCGGATGACGTGGAGCCTGACGCAGAAGATCTTCTCCGCACCCTGGTTC
TGGGCGATGAGGCTGGCGACACGAAGGTTACGGTGAAGTCGTCCCGTACC
CTGTCTCTGGTCCGTAATGATGCCCAGAGGGCCCATGCCGTGAAGCCACC
CAGCACCCAGGCTGTGAGCAAAGATGCCCAGATGGCCCTTGCCGTGAGGC
AAGAGGAGCTACTCCGCACCCTTCTGATGGGTCTGCCGGACGAAACGTCC
CAGGCGACCATCACCGTGACGCCACGGAAGCCTGTTCGCAGGCAGTCTCT
AGCCGTGAAGCTGGTGGAGCCAGCCCCCACCCAGTCTCTGACCGACGCAA
CCACAAGGGCCCTGGAAAGCGCTCCCGTCCTTCAGCCGCCACAGAAGCCA
TCCAGGTGCAGGGACTACGTCATGTACAGGAATAACTTCGGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00063259BlTCONS00063259-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00063259-exon-Sc0000050-1564993656:1821346..1821495BlTCONS00063259-exon-Sc0000050-1564993656:1821346..1821495Branchiostoma lanceolatumexon
BlTCONS00063259-exon-Sc0000050-1564993656:1820797..1820928BlTCONS00063259-exon-Sc0000050-1564993656:1820797..1820928Branchiostoma lanceolatumexon
BlTCONS00063259-exon-Sc0000050-1564993656:1819480..1820227BlTCONS00063259-exon-Sc0000050-1564993656:1819480..1820227Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000050genomeSc0000050:1819480..1821495 -
Properties
Property NameValue
GeneIDBlCUFF030987