BlTCONS00063142 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00063142
Unique NameBlTCONS00063142
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000050:857206..858808-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00063142 ID=BlTCONS00063142|Name=BlTCONS00063142|organism=Branchiostoma lanceolatum|type=mRNA|length=1603bp|location=Sequence derived from alignment at Sc0000050:857206..858808- (Branchiostoma lanceolatum)
CTTTCTACAACCCGGAAGCGAGACTGTTGTGGCGCCGTTTTCAAACTTTC CCCAACTTGGCCGACCTTGGAACCGGGGAATGGAGAAGAACAGACTTGAT CAGGCTTCTTCACCGAGTCGAACGCAAGAGAGAAGACTACTCATCACCCG TGCTGCAAAACCAGGTGGAAAATATGCTCGGATTTCTGTACTTCAAACTC AATATGACGAAAGAGGCGAAAGGGTGTCTTGGGAGAGTGAAGGATCGTGA CCCAACAAACATCATCGCTTTTACAACAAGAGGGTACATCCTCCTTGAGC ACAACCGTCTTACACAGGCTAAGATAGTTCTGGAGGAATTTGAGGACAAG ATATCTCCAGGAAAGACAACAGAGGAAGAGGTTGGGTTGAGGAAGGCGAT AGCGTCGGGCGAGAAAGCGTTTTGCTGCTCACAACTCGGACCAAAGTGTT TCAAGAAAGGAATCGAACTCTACGAGAATGCTTTATCTTGTCCAGTCTTA GACGCAGACTGCAGACTCGTTATTAAGTTTGGCCTTGGTCTATTACTGTC TAAATGTCTGGATGAGAATGTCTGCGGACAGATAAAAGGTTTTGACCCTG ACTCGTTTTACGGAAAGGCCAGAGACGTGTTTCTTGGCGTGGTCACAGAG GGAACCATGGTGATGGTCGCTAGGGCGTGGCTGTTGCTAGGGGAGACGCA AGTGAGGTATTTCCACTTTTTGTCCAAACCAGAACAAGAGCTGATGAAGA AAATGGCGTCACATCAGACCGCAGAAGAATGCTTCGCCAAAGCTGAAGCC ACTGCGCAGGGGAAGGATGCATTCGTCTTAGAAAGACTAGGACGTTATCT AAGACTTTGTAAGAAATTTACCGCTGCCATTGCCACGTTAGAACAAGCCT TAGAGCTCAGGCCAACGTCATTTGCGTATCATGAAGTCGGGTTGGTTTAC CTAGAAAAGTGGACGTCTTCTAAGAAACCCAGACCTTATAGACCTACAAG GAACCGTGAAGACGTCAAACCACGTCTTAAGTCATCAGCAAAAGCGTCTC AAGTCAATACTCCAACTTCTCAGACAAAAGTTGCAAGAAGTGCGACAGAT TTTAACCGAGGAGACGTGTGGCACAGTGTAAAACCCACACCTCCTGAACC ACATGCATCTCAGCAACTCCTTCCCAAATCGGCAAGTGGCGCTGCACGGT TGAAGGGCACCAGGTCTGATTGCGTTCTAAAATTCGAAGCAAATACCGAC GCCATGAAAAGAGGACAGATAGACCGAATTCTAACAGCGGCAGGAAATCT TGTCTTAAAAGATGTCAAAAGTCCCTTACTGAAAAGAGCAAGAGAATACT TCGTAAAAGCTCTCGAGCTAGGAGGAAATTCTCCCTACATGATCCTGAAG GACCTTGCGAGAACGAAGTATTCCCTGGGCACGGATCCTTCGGAAGTGTT CGGCGTTTTGGAGCAGGCGCTCCGCGATCGGTCTCCACAGTTTCGAAAGT GTGCTCGAAATGTTCTGGAGTTGTGGGGGGTGTACTTACTCGATCAGGGT GGTATCGAACGTGGAAAGGTACTGCTGTGTAAAGTGTTGGAGATGTGTGT GAC

Coding sequence (CDS) from alignment at Sc0000050:857206..858808-

>BlTCONS00063142 ID=BlTCONS00063142|Name=BlTCONS00063142|organism=Branchiostoma lanceolatum|type=CDS|length=1599bp|location=Sequence derived from alignment at Sc0000050:857206..858808- (Branchiostoma lanceolatum)
TTCTACAACCCGGAAGCGAGACTGTTGTGGCGCCGTTTTCAAACTTTCCC
CAACTTGGCCGACCTTGGAACCGGGGAATGGAGAAGAACAGACTTGATCA
GGCTTCTTCACCGAGTCGAACGCAAGAGAGAAGACTACTCATCACCCGTG
CTGCAAAACCAGGTGGAAAATATGCTCGGATTTCTGTACTTCAAACTCAA
TATGACGAAAGAGGCGAAAGGGTGTCTTGGGAGAGTGAAGGATCGTGACC
CAACAAACATCATCGCTTTTACAACAAGAGGGTACATCCTCCTTGAGCAC
AACCGTCTTACACAGGCTAAGATAGTTCTGGAGGAATTTGAGGACAAGAT
ATCTCCAGGAAAGACAACAGAGGAAGAGGTTGGGTTGAGGAAGGCGATAG
CGTCGGGCGAGAAAGCGTTTTGCTGCTCACAACTCGGACCAAAGTGTTTC
AAGAAAGGAATCGAACTCTACGAGAATGCTTTATCTTGTCCAGTCTTAGA
CGCAGACTGCAGACTCGTTATTAAGTTTGGCCTTGGTCTATTACTGTCTA
AATGTCTGGATGAGAATGTCTGCGGACAGATAAAAGGTTTTGACCCTGAC
TCGTTTTACGGAAAGGCCAGAGACGTGTTTCTTGGCGTGGTCACAGAGGG
AACCATGGTGATGGTCGCTAGGGCGTGGCTGTTGCTAGGGGAGACGCAAG
TGAGGTATTTCCACTTTTTGTCCAAACCAGAACAAGAGCTGATGAAGAAA
ATGGCGTCACATCAGACCGCAGAAGAATGCTTCGCCAAAGCTGAAGCCAC
TGCGCAGGGGAAGGATGCATTCGTCTTAGAAAGACTAGGACGTTATCTAA
GACTTTGTAAGAAATTTACCGCTGCCATTGCCACGTTAGAACAAGCCTTA
GAGCTCAGGCCAACGTCATTTGCGTATCATGAAGTCGGGTTGGTTTACCT
AGAAAAGTGGACGTCTTCTAAGAAACCCAGACCTTATAGACCTACAAGGA
ACCGTGAAGACGTCAAACCACGTCTTAAGTCATCAGCAAAAGCGTCTCAA
GTCAATACTCCAACTTCTCAGACAAAAGTTGCAAGAAGTGCGACAGATTT
TAACCGAGGAGACGTGTGGCACAGTGTAAAACCCACACCTCCTGAACCAC
ATGCATCTCAGCAACTCCTTCCCAAATCGGCAAGTGGCGCTGCACGGTTG
AAGGGCACCAGGTCTGATTGCGTTCTAAAATTCGAAGCAAATACCGACGC
CATGAAAAGAGGACAGATAGACCGAATTCTAACAGCGGCAGGAAATCTTG
TCTTAAAAGATGTCAAAAGTCCCTTACTGAAAAGAGCAAGAGAATACTTC
GTAAAAGCTCTCGAGCTAGGAGGAAATTCTCCCTACATGATCCTGAAGGA
CCTTGCGAGAACGAAGTATTCCCTGGGCACGGATCCTTCGGAAGTGTTCG
GCGTTTTGGAGCAGGCGCTCCGCGATCGGTCTCCACAGTTTCGAAAGTGT
GCTCGAAATGTTCTGGAGTTGTGGGGGGTGTACTTACTCGATCAGGGTGG
TATCGAACGTGGAAAGGTACTGCTGTGTAAAGTGTTGGAGATGTGTGTG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00063142-exon-Sc0000050-1564993656:857206..858808BlTCONS00063142-exon-Sc0000050-1564993656:857206..858808Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00063142BlTCONS00063142-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000050genomeSc0000050:857206..858808 -
Properties
Property NameValue
GeneIDBlCUFF030940