BlTCONS00063141 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00063141
Unique NameBlTCONS00063141
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000050:855667..856950-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00063141 ID=BlTCONS00063141|Name=BlTCONS00063141|organism=Branchiostoma lanceolatum|type=mRNA|length=1284bp|location=Sequence derived from alignment at Sc0000050:855667..856950- (Branchiostoma lanceolatum)
TTTTGGCGGCATTGTAGACCGACATCGTTCTACAGAATGCGATCTAGCTG
TTGCTCGCATCCAGGCGGACATCAACGAAGTTATTGCAAGTGATGTCTAT
CGCGAAACTTTCCACGCTTCAGTTACGTCACCTGGCGGTCACAGTTGTCG
CTACAATGTGTTCATCATGTATGACCCTAAGGATCAGGTCTATGCAGATG
AGTTGGTGAAACTGCTCGAGGTGGACTGCGGTCTTCATTGCTGTTACGAA
TCGAGAGACTTTGAGCCCGGGCTGTTTCCGATGGACAACATTGACAGATG
TCTGTCTCGATCGTGCTGTGTTCTGCATGTCGTAACCTTGACCTACGCCA
GGTAATGTCATCTGTGTATATTTCCTACAACCTTAGGATTGGGTGAGCTA
ACGTATTTCTCAAGGCAACAAAACATTCTGTGGGTTTAACAATATCAAAA
AACCCAAAGCTTACAGGGCGGGATTTTTCTGAGGATGTATCAAAAGCATG
TGGCACGAAAAGGAAAACAGGGCTAGGACAATGTAAAATGTTACTATTAC
ATAAGTTGTACATGTGTCTCATAGGAGTAGTTGTATTCATGTACGTAGCC
GAGAAGATGTAAGGGAAAATCTGGTTGTTTACGAGTTAAATGTATCTGTG
ACTGCAGGCGGTACCATTATTAACAACTTACTACATGTACTTCATACGTG
TGTTGATCTTATTTCGTCTTGTAGGAATTACCTACAGCACGCTGAGAAGA
CGCGACGAAAAGTGAATGAGCGGGATCACGGGTGTGTGGCGGCTGTGGTC
TACAAGCATTACCCCGTCCCGCGGGAGTTTGAGGGCTGCACTGTTATAGA
CAGCGAGGATTTCTTTGACTCTTCCCAAGGACAGAAGACCAGAAGATGGG
CAGAGTTTCGGGAGGCGGTGTTTCGCGCATTGTTACCGCTGAAGTGACTC
ACATGTCATTGACAATACCAAGAACTGTTTTCTCTCGTTTGTCGGTTTTC
CTTCGATACTTTGTTGTCCTCAGACGTTTGAAGCGTAAAGACCAACAATA
AATACCTTGTGTAGAATATGTACTATTAATAGTCTTGCGAGATTGATGAA
TGCCAACTACTACTACTGCTACTTTGTTGTCCTTTATGCCATTTCTTACT
GCCTAGCTGCGCTTCCTTTGCTTTCTGTTGTTTGATGCTTCATTCATTAC
ATCATTTTAATGGTCTCTTTTTTACATGATGCTCCCCTTGTTCTTTTCTT
TCTATTGCCTCCGCGTACGGAGGTTTTATTTTCG

Coding sequence (CDS) from alignment at Sc0000050:855667..856950-

>BlTCONS00063141 ID=BlTCONS00063141|Name=BlTCONS00063141|organism=Branchiostoma lanceolatum|type=CDS|length=573bp|location=Sequence derived from alignment at Sc0000050:855667..856950- (Branchiostoma lanceolatum)
TTTGGCGGCATTGTAGACCGACATCGTTCTACAGAATGCGATCTAGCTGT
TGCTCGCATCCAGGCGGACATCAACGAAGTTATTGCAAGTGATGTCTATC
GCGAAACTTTCCACGCTTCAGTTACGTCACCTGGCGGTCACAGTTGTCGC
TACAATGTGTTCATCATGTATGACCCTAAGGATCAGGTCTATGCAGATGA
GTTGGTGAAACTGCTCGAGGTGGACTGCGGTCTTCATTGCTGTTACGAAT
CGAGAGACTTTGAGCCCGGGCTGTTTCCGATGGACAACATTGACAGATGT
CTGTCTCGATCGTGCTGTGTTCTGCATGTCGTAACCTTGACCTACGCCAG
GAATTACCTACAGCACGCTGAGAAGACGCGACGAAAAGTGAATGAGCGGG
ATCACGGGTGTGTGGCGGCTGTGGTCTACAAGCATTACCCCGTCCCGCGG
GAGTTTGAGGGCTGCACTGTTATAGACAGCGAGGATTTCTTTGACTCTTC
CCAAGGACAGAAGACCAGAAGATGGGCAGAGTTTCGGGAGGCGGTGTTTC
GCGCATTGTTACCGCTGAAGTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00063141-exon-Sc0000050-1564993656:856600..856950BlTCONS00063141-exon-Sc0000050-1564993656:856600..856950Branchiostoma lanceolatumexon
BlTCONS00063141-exon-Sc0000050-1564993656:855667..856226BlTCONS00063141-exon-Sc0000050-1564993656:855667..856226Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00063141BlTCONS00063141-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000050genomeSc0000050:855667..856950 -
Properties
Property NameValue
GeneIDBlCUFF030939