BlTCONS00063121 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00063121
Unique NameBlTCONS00063121
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000050:665519..668100-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00063121 ID=BlTCONS00063121|Name=BlTCONS00063121|organism=Branchiostoma lanceolatum|type=mRNA|length=2582bp|location=Sequence derived from alignment at Sc0000050:665519..668100- (Branchiostoma lanceolatum)
GGGACGTTTGTTGCGAAGGAAATAAATTTTGAAGTTTCAGTTTTCCACCT GCAACTTTCCGCCGGCAAATCCTTGTTTGTCGTGTATGAACAACTCTAAC GTCTTACAGGTGGGTTCAGGCTTGTCCTCTGTCTTAGGCATAAAAAAATC GGAAGCAGAACATGAGAAGAAGAGATTTGACAGTGGTTCATTCGAATCGG ATATATTATTGGGGAGGGGGGCACCGCACCGCTAACTTTTGTTGATGATT TGTTGACTTGTATTTGTTTGGGGTGACTAGATGTAAAACTGTTGTGCTTT ATTATAAGATGTGAATCAAAATAATGAAATGTAGGCAGGAGAATGTTGGA ATGAGAAAGGTTGATAAACTGAAAGTAAAAGTTGTTAGGGCAGGTGGTTC GACTTCGGGAACATTCGACAGTGGTTAGCTACAACGTTAACGTTTACTAG TGTTTCAGTTATTATTTACATCCCAAAATGATATCATGGGTTGCTATCGG CAGAGGAACATGTAAAAGTGATTTATAACCCTAGTACAAATTCAATCATA TGAATTATTATAATAGCCGATACTATAATGATTTATATGATTTGATTGTG ATAGAGTTATCATTGCAATAGGGTTTTTTGAATCCATTGTCTAAGACAAT CTTATTGTATAACGGTTTTTGTTGTCTTTTTGTTTGCTTTAAAAGAAGAA GAAAGAATAAAAGATGTCATCAGTGGGGTTTGGTCAGACCACGAAAAGAT ACAACATCCCCATTGAACACCTGGACTACAAGTACATCGAGGGGTGTGAG AATGCGCGGGAACTGGAGAAGATTCTGTACGAGCTGCGATCGGGGGACGA GGGGATCTACCCTGAACTCATCAACTGCTGTGAGAAGAGACTGGAGTCTC TGAAACCTGACAGGTATGGGGAAGGATTAAAATGATATTTAGTAAATTTT TCTTGGAAAGACTAAAAGTTAAGTATCTCCCTTGTAGATCTGTGGTTTGA TTTTGACGATAAGATGATTTGAATAATATGATATGTAGTAATTTTCTTTG TCTTTACTTCATCCCAAGGGAGTGAAGCATTGCATTTGGCATGTCTGTGT ATGTATGTGTGTGTCTGCCTGGGTGTATGTGTTTTTTATGTGTGTCTATC TGTGTGTGTGTGTGTTTGTATGTGTGTGTGTGTGTATGTGTGTCTGTCTC TGTGTGTTTCTGTAAATCCCGATTTTTGTGAATCCCAACACACACAATGC AGCTTAACCGTAATAAACTTTAGTGCTTCTATTTTTGTCTGTAGGACTGT AAGAGTTGCAAGGCATTTAGGATAAGGGGATGGATGAAGTCTGCCATCTC TGATTGCCTTGCCTGTCTTTGAAAAAAACCACATATAGTTGTAATGATAC AGTATAACCCCGTCTCTCTTACAGTAAAGCCCTGAGAGTGGACCTGCCTG CCAAGAGGCCATATGACATTGATAATAAGGAGTGGACAGAGATTACACAG GACATAACAGTAAGTACATAGTTCCAGAAAATTTCTTTCCTTGCTGCCTT GTAGGTTATATTTATATTCAACCATTGTTTGGTAAATGTAGCTGACGACA GAAAGATCTTTTTGGTTTTGTTGTGGAAGTGATAACAAGGATTACTTTGA CAGATTGGAAATTCATTGATTGATCAACAGCTTGATTGATTGATTCACTC ATTCATTGACAGATAGAATGACAAGTTTGTTGATGTGTTAAAGAGCTGGG AGGAGGGGATCCTTATTTGGATATCAAACTCATATGGTAAATGGTAATGT AGGTCAATTAGGATGACTGGCATATTGATTGACATATTTAGAGATGAGAG AAGGAAAACCATATTTGGTTTTTAAACCCATATATGGTAAATGTGATGAT GATTGACACATTGATTGACATGTTCAGAGTTGGGAGGAGGAGATTCAGCA GAAGGAGGAGGACCTGAAGAAGCAGCGACAGCAGGTAGTGCATGATGGGA AACTTCCACCGATCAGGGGGTCGGGACAGACCATTGGCACCAGTAAGGTA GGGGTGGTCAGGCTATTAAAGTCCTTGTTTATGATACAAAAGATAAAGGT AAAGTTATCATCTTCAATTAAGGTGAAGCATGATACTTTGTCAAGTAGCT AGTAGTGCAATGCAGCTTCACTACAGCTCGCGTATTTGGCCAAGCACAGA GGGTCAACCCTACTCTTCTCGAAAGTGTGTTGGGTTCTTTATGTGATGAA GTTTGATGCTTTAGGCTTATACCTGAAGCTAATGCCGTATCAAATTAATT ATGAAAGTTTCAAACCACTTGGTCAAAAATCCTCAAAAGTATGGTCAATT GGCATAGATATGTGTATTCCTCAATTTGTTCAAAAGTTTGTCATTTTGAA TATTTATTTAGGCCTACTGGTCATGCAAATAAAGAATCTAATCATACATG TGTGTCTATTAGATGTATCAATTACTAATTGTATTACAATGTATATCCAC CTTTGTAGCCTGGTTCCGGCACTTCTCCAGCCAACCAGCAAAACAAGCCC TCCCAAAAACAGAGCCTGCCCAGAGACTATAG

Coding sequence (CDS) from alignment at Sc0000050:665519..668100-

>BlTCONS00063121 ID=BlTCONS00063121|Name=BlTCONS00063121|organism=Branchiostoma lanceolatum|type=CDS|length=477bp|location=Sequence derived from alignment at Sc0000050:665519..668100- (Branchiostoma lanceolatum)
ATGTCATCAGTGGGGTTTGGTCAGACCACGAAAAGATACAACATCCCCAT
TGAACACCTGGACTACAAGTACATCGAGGGGTGTGAGAATGCGCGGGAAC
TGGAGAAGATTCTGTACGAGCTGCGATCGGGGGACGAGGGGATCTACCCT
GAACTCATCAACTGCTGTGAGAAGAGACTGGAGTCTCTGAAACCTGACAG
TAAAGCCCTGAGAGTGGACCTGCCTGCCAAGAGGCCATATGACATTGATA
ATAAGGAGTGGACAGAGATTACACAGGACATAACAAGTTGGGAGGAGGAG
ATTCAGCAGAAGGAGGAGGACCTGAAGAAGCAGCGACAGCAGGTAGTGCA
TGATGGGAAACTTCCACCGATCAGGGGGTCGGGACAGACCATTGGCACCA
GTAAGCCTGGTTCCGGCACTTCTCCAGCCAACCAGCAAAACAAGCCCTCC
CAAAAACAGAGCCTGCCCAGAGACTAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00063121BlTCONS00063121-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00063121-exon-Sc0000050-1564993656:667992..668100BlTCONS00063121-exon-Sc0000050-1564993656:667992..668100Branchiostoma lanceolatumexon
BlTCONS00063121-exon-Sc0000050-1564993656:667188..667402BlTCONS00063121-exon-Sc0000050-1564993656:667188..667402Branchiostoma lanceolatumexon
BlTCONS00063121-exon-Sc0000050-1564993656:666592..666676BlTCONS00063121-exon-Sc0000050-1564993656:666592..666676Branchiostoma lanceolatumexon
BlTCONS00063121-exon-Sc0000050-1564993656:666054..666173BlTCONS00063121-exon-Sc0000050-1564993656:666054..666173Branchiostoma lanceolatumexon
BlTCONS00063121-exon-Sc0000050-1564993656:665519..665592BlTCONS00063121-exon-Sc0000050-1564993656:665519..665592Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000050genomeSc0000050:665519..668100 -
Properties
Property NameValue
GeneIDBlCUFF030934