BlTCONS00063104 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00063104
Unique NameBlTCONS00063104
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000050:643346..645867-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00063104 ID=BlTCONS00063104|Name=BlTCONS00063104|organism=Branchiostoma lanceolatum|type=mRNA|length=2522bp|location=Sequence derived from alignment at Sc0000050:643346..645867- (Branchiostoma lanceolatum)
GTGGCTTTTGCTCTCAACCAAAATGTGGTTCATGGAACACATTTTTCTGA AATGTTCTGTTTTCAACAAAGTTTAGCCACAATAATGGTTACAATAATTG CTAACATTGCTACATATGGACCCCATGATCATGTTACACCTGCGTGAACA AATTGACCTTTAACCCCAGGTATCCGGGTTTCTCTTGCACGGGTTGAATG TCTTATTACATAGAGACTGAAGGTCAGCTTTTCTCGACATACAAACTAAG CTACCTCTCTCCCATGTAGGTATATCACCAAGCCGAGCGCTGCTAAGCTG TGGATCAGAATGGCTATGTCCGTCAAATATGGCTGGTAAGTTTTCACAAC ACTCATAACCGTATCACCTTTTTCTGTTCAATGATTAAGCTATGCAGATT CTATTTATTCTGTTAGTGGGCTGATAACAGATCTAAATTAACAATAGATG TATCATAATTTAAGATGTTTTAGAATAAACCACAAACTTGGAGGCGTGCA ACAGGCGAAACAACCATATAGCCGTATATAGATCATACTATAGCTGTTAC ATAACGCTTTTATTCCAATAGTGTATGTTGGAAGCAAACAATGGTTATCT TTATTTTCTAACGGAATCATATCGTTGTTATTTCTACAGAGACAATAACG ATAATAGCCCTATTGGTCAATGACGAGTACGGGAGTTCCAAGGGCGGCAT CTCCACCGTCAACCGCGAGGTGGCCAAGCTGCTACGGAAAGGCAATGTCG TCGTCTACAACACGGTTCTGTATCCACCGCCGAAGGAAGATATAGAATGC GCAGAAAGCGATGGCGTCATACTACTGACCCCATTCCGTGATCCTGACGA CCCGCGTGAGCCGTGCATCGAATGGCTGACGTACGATCACATGACCCGCT ACCGGAACCTGCCGGAACGGGTAGACATCATCGTCGGCCACTTCCCCATC ACCAGCCAAGCGGCCAAGAACATCAGCGCGCGCTATCCCGATGCTAAAAC AGTCCTCTGCAACCACATCATACCGTTTGACACCGATCACTTCAAGGGAA ACGCCGCGGCCATCGCTGCGGATGGAAAAGAGAAACGACTGACCAAAGAA GCTAAGGATGTTCACGCTGTCTTCTCTGTCGGAAAGCGGATCCACAACCA CTACGACAACCAGTACAGGGTACACGACCCGCCGATCTCCCACTATCTGT TCCTCCCAAAGCCTTCGGAAACCTTTGCGAACACCAAGGTGCGCTACGGC GCCGGTGAGAAGATTGTACTCACCGTCGGACGAGTGACGAGGGTAGAGAG ACTGAAGGGGCTTGATATAGCTGCAAAAGCCATGGGGAAAGTGGTTGAGA AGATCCCAAACGCGCGATTGCGAGTCAGAGGGATTGCTTCCGATGACTAC GCGAGAAGCAAGAAGATCCTTGAGGACAACCTCGACAGCGGGAAGCTGAC GCCGACACTACTGCCGTACGGTACGGAGAGGGAGATCATCCAGGATATCA AGCAAGCCCACCTGGTCCTGATGCCGTCCCGCGCAGAGCCGTTCGGAATG GTCGGGCTGGAGGCCATCGCAGCGGGCATCCCCGTCCTCATCTCTGACCA ATCCGGGCTCGCAGATCTGATGAGAGAGCTGATGCAGAAGGAGAAAGTCT CCGCGGATTTCCGGCACAAGATCGTCACCACCAGCGTCCGGGAGTCAGAC CTGGAGCAAGCGGCCCAGGTTTGGGCGGACAAGATCGTGGACATTCTCGA CGACATGAGCTTGAAGTCTGAATTCAAGAAGGCCGCACAGTTCAAGAAGG AACTGTTGGCGTCCAAGTACTGGGAAGAGTCTCACAAGGCCTTCCTGGAG GCGTGCTGTGGCACTAAGTAAACCTCCCATGAGATTATTCTGTGCATTTA TCCGCGGGAGCTTTCCATCTTCTACTACCAACGTCTTTTGGTACTTTTTG GACGAATTACTTGTACTTAGAAAGCTCACCATTTTAACCCTTAAGTTTAC CTCGCGGCTAGATTTTTTGTTCTCAGTTGACAATTGTCAGAAGTAAGGCC ACCATATGAAATAGAATGTTCCAATACTCTATCTAGTGATAAGGTTGTAT ATGTGCAATATTTCCAGACTTCTTTGCTGGCAAGGATGTAATTGAGTTTT TGAAAATGCTACCGTAGTGATATTTGGCCTTAATTGTTACTTTGGATGGC CATTTTGATGCAATTTTCTGGTTCAAATGTAGAAGCACATATTTTAGAAG AGGGATAGATTAGGATATTCTGAATGGTTGTTACTTAAGAACTTGTTTTA TGTCTCAAACTTAAACATCATTTTCTAACTTAACAAAAAATCAAAGCGTA CTACTGGATGTGCTCTGTGTAGATTGTACTGATTGTTGCACTGTTAATCT TTTAGCACGAATCATCAAGGCCAGGAAATTGTGTTGTTGAGTGATGAAAT GAATAAAATTGTAATGATTGCCTTCACCAACTAGAAGGAGAGAATCTTAA AGCACAATGACTACATTGAATA

Coding sequence (CDS) from alignment at Sc0000050:643346..645867-

>BlTCONS00063104 ID=BlTCONS00063104|Name=BlTCONS00063104|organism=Branchiostoma lanceolatum|type=CDS|length=1239bp|location=Sequence derived from alignment at Sc0000050:643346..645867- (Branchiostoma lanceolatum)
ATGGCTGAGACAATAACGATAATAGCCCTATTGGTCAATGACGAGTACGG
GAGTTCCAAGGGCGGCATCTCCACCGTCAACCGCGAGGTGGCCAAGCTGC
TACGGAAAGGCAATGTCGTCGTCTACAACACGGTTCTGTATCCACCGCCG
AAGGAAGATATAGAATGCGCAGAAAGCGATGGCGTCATACTACTGACCCC
ATTCCGTGATCCTGACGACCCGCGTGAGCCGTGCATCGAATGGCTGACGT
ACGATCACATGACCCGCTACCGGAACCTGCCGGAACGGGTAGACATCATC
GTCGGCCACTTCCCCATCACCAGCCAAGCGGCCAAGAACATCAGCGCGCG
CTATCCCGATGCTAAAACAGTCCTCTGCAACCACATCATACCGTTTGACA
CCGATCACTTCAAGGGAAACGCCGCGGCCATCGCTGCGGATGGAAAAGAG
AAACGACTGACCAAAGAAGCTAAGGATGTTCACGCTGTCTTCTCTGTCGG
AAAGCGGATCCACAACCACTACGACAACCAGTACAGGGTACACGACCCGC
CGATCTCCCACTATCTGTTCCTCCCAAAGCCTTCGGAAACCTTTGCGAAC
ACCAAGGTGCGCTACGGCGCCGGTGAGAAGATTGTACTCACCGTCGGACG
AGTGACGAGGGTAGAGAGACTGAAGGGGCTTGATATAGCTGCAAAAGCCA
TGGGGAAAGTGGTTGAGAAGATCCCAAACGCGCGATTGCGAGTCAGAGGG
ATTGCTTCCGATGACTACGCGAGAAGCAAGAAGATCCTTGAGGACAACCT
CGACAGCGGGAAGCTGACGCCGACACTACTGCCGTACGGTACGGAGAGGG
AGATCATCCAGGATATCAAGCAAGCCCACCTGGTCCTGATGCCGTCCCGC
GCAGAGCCGTTCGGAATGGTCGGGCTGGAGGCCATCGCAGCGGGCATCCC
CGTCCTCATCTCTGACCAATCCGGGCTCGCAGATCTGATGAGAGAGCTGA
TGCAGAAGGAGAAAGTCTCCGCGGATTTCCGGCACAAGATCGTCACCACC
AGCGTCCGGGAGTCAGACCTGGAGCAAGCGGCCCAGGTTTGGGCGGACAA
GATCGTGGACATTCTCGACGACATGAGCTTGAAGTCTGAATTCAAGAAGG
CCGCACAGTTCAAGAAGGAACTGTTGGCGTCCAAGTACTGGGAAGAGTCT
CACAAGGCCTTCCTGGAGGCGTGCTGTGGCACTAAGTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00063104-exon-Sc0000050-1564993656:645699..645867BlTCONS00063104-exon-Sc0000050-1564993656:645699..645867Branchiostoma lanceolatumexon
BlTCONS00063104-exon-Sc0000050-1564993656:645533..645598BlTCONS00063104-exon-Sc0000050-1564993656:645533..645598Branchiostoma lanceolatumexon
BlTCONS00063104-exon-Sc0000050-1564993656:643346..645228BlTCONS00063104-exon-Sc0000050-1564993656:643346..645228Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00063104BlTCONS00063104-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000050genomeSc0000050:643346..645867 -
Properties
Property NameValue
GeneIDBlCUFF030933