BlTCONS00063100 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00063100
Unique NameBlTCONS00063100
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000050:623406..626191-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00063100 ID=BlTCONS00063100|Name=BlTCONS00063100|organism=Branchiostoma lanceolatum|type=mRNA|length=2786bp|location=Sequence derived from alignment at Sc0000050:623406..626191- (Branchiostoma lanceolatum)
ATTTGGTAATATCTCTGCTATTCTCAGAGACTAAAGATTCAAAGCATAGC ACTACTTTTGCTCGCGGATGTCAATCATCAGTCAGAAGTAAACAACTTCA GCCTCTTTCCGGGCTGACAAAAAGGAGGCAGCCATGAGGTTGGTGCCGAA CCGAGATTTTCTTACGATTTTGTGAAATCATGGGACATTTTTTAACATTT TTACATAGGAAAAGATAGATAAGGCTTAACTGGATGTGAAGAAGTCGTCT TTGTGCACAATCGTGGCTGCTAGGATGAGATATTTAAGTGGAAGCGTGTC CACACTTTTCCTCGCTAGTATCCAAGATGGCCGCCGTCCGCCATCTTGAC CATTGCTTTTCTTTGCGCAACAACACAGAAAATAAGACTCAACACTACGC AATTCGTAGATATTACCGATATTCTACACCACCGAAAACGTGCAGTGATT TGTGTTTGTCGATTTGATAACCATGACGAGGTATGAAATGGCCGTGGAGT TCTAGAAATGAAACCTTTTTTTATGCCACTAGTATATAAGTTACTAAAGT ATTTCTCTGCGCAACGTGCAAGCACATATGTAAGAAATTATGTGTGTTTG TGCTACCCTTGTCTAAATCCAGTTACTGCTGTTTCAAAACATTGGAATTA AGTGTGCTAAGAACGTGTGTTATAGTATAGATATCTGATGTGTTTTAAGT TATGTGTGTTTGCTACTTTTGTCTAAATCCATTTCTGTTTTCTTGTTCCA GTACTCTACGCTTGCAAAAGCGGCTGTCAGCCAGTGTCCTTAAGTGTGGC AAGAACAAGGTCTGGTTGGACCCCAACGAGACAAATGAAATCGCCAACGC CAACTCAAGTAAGCCTGAGATTTGCTGTTACATACATGTAACTTGAGATA AGTCATGATTCAGATATACTGTTAGTGTTGATCTTACAAGTGAACCTAAG CACTGTTTTAAGGAAACTTAAGACATGATTTTGGGGGATTAACTGTCAGA ACATGATGCTCAAAGACATTTATTTCCCTTTTCCAGGGCAAAACATCAGG AAGTTGGTGAAAGATGGTCTGATCATCCGTAAGCCGGTGGCTGTCCACTC CCGAGCACGTGTCCGCAAGGCTCACATCGCTCGCCGCAAGGGCAGACACA TGGGCTATGGTAAGTTGAAGGAGGCTGGACAATGTGCTTGATCTGATCAT AATTACTAAAAAGATGTCTGAAGATATGAACTTGTCTTCATATTCGTTTA AAGCTTGATATAGCAGCTTAACAGTACTGTGAGCTTATGCAAAGATGACT AGTGACTTTGAGGCACAGCCAAAAAGCCCTTTTGTCACTATGTGTTTAAA AAAACCCACAGAAACCAGAATAAGAGATTTTAATTTCTAGGTTCTTCAGA TACCCCGAGCCCTTAACCTACTAAGGTTTGGCACGTAGATAAAGAGATTT ACACACAAACATACACAAACTGCCTGGTATATATATATGTCTGAGTTATT TCAGCTTTCTAGTGTCTTAGAATTTCTGTATTGCTCTATTTGTTATCATC TAACCTATCTGTCCATTCACCCAGGTAAGAGGAAGGGTACAGCGAACGCA CGTATGCCAGAGAAGGTCATCTGGATGCGCCGCATGCGTGTTCTGCGCAG AATGTTGCGGAAATACCGCGAGTCCAAGAAGATCGACAAGCATCTGTAAG TCTCACTTAAGTGTCTCTTCATGTAGATCATTAGAATTAGCCACGATCCG GTGTGCTTATGTTTACGATCACCTAGAATGTATTTCCCAATCAGGTTTTC TTGTGTAGCTTTTATAGTTTGCTCATATTTTTAGTCAAGTCAAACCTGTA GAAGTGATTCCTTCTTGATAAGAGACCACCTGTCCAATGTGACCACTTTT TGGTGGTCCCTTAGATAATTTTTCCCATTGACACAAGCATTAAAAATCCT GTCTATAGTGGCCACCTGTTCACATAGGCAAGATTTTATAATCCCTTAAG TGGTCTTCTTGGGCAGTTTTGAGTTTGACTTACAATATACCTTTACTTTG TGTGACGTAGGTACCACCAGCTGTACATGAAGGCGAAGGGTAACGTGTTC AAGAACAAGCGACTGATGATGGAGTACATCCACAAGAGGAAGGCCGAGAA GCAGCGCTCCAAGCTGTTGGCGTAAGTTTTTGCACTCGTCTTTTACTCTT GATTTATTCAACCATTTAAATGTGAGAGAAACTTCACTGGCCTGACAAGT ACTTCAACATGCACCATTCCTGGTGTATGTCCCCAACTCTGGGAGGTTTG AGTCCTTTCGTAGTCAGTGCTGTGCCATCAAGTTGAGTTTGTTTTCTTGT GAATATACAAAGGAGTACCGATAGCATCATGCAATAATACCAAAACAATT ATGGTGTTGTGGGGTGGTTTAAGTATGCCAAGGAATAATTTCTGGCATTG ATGTTGTAAATGGTTATATAATTGTCCCTGACATTCCGAAAAGCATTCTT TGTTATTGCTTGGAAAACTAGACTACCCCAAAGAAACAGAAGTAAGTTCT TTGGTTTGTACAATTATACTTAAAAGCACATCAATATCTTATCTAAACCC TTTGTGTTTCCATAGTGACCAAGCCGAGGCCCGTAGGTCCAAGAACAAGG ACAAGCGCGCCAGGCGCGAAGAGCGCCTCGCTGCCAAGCGTGCGGAGATC CTCAAGGCGTACACCGGAGAGGAGGCCACCAAGAAGGCATAGACGTGTCG TCCGCGCTAGACAGATCCTATCCAATCTTAGTCCTG

Coding sequence (CDS) from alignment at Sc0000050:623406..626191-

>BlTCONS00063100 ID=BlTCONS00063100|Name=BlTCONS00063100|organism=Branchiostoma lanceolatum|type=CDS|length=594bp|location=Sequence derived from alignment at Sc0000050:623406..626191- (Branchiostoma lanceolatum)
ATGAGTACTCTACGCTTGCAAAAGCGGCTGTCAGCCAGTGTCCTTAAGTG
TGGCAAGAACAAGGTCTGGTTGGACCCCAACGAGACAAATGAAATCGCCA
ACGCCAACTCAAGGCAAAACATCAGGAAGTTGGTGAAAGATGGTCTGATC
ATCCGTAAGCCGGTGGCTGTCCACTCCCGAGCACGTGTCCGCAAGGCTCA
CATCGCTCGCCGCAAGGGCAGACACATGGGCTATGGTAAGAGGAAGGGTA
CAGCGAACGCACGTATGCCAGAGAAGGTCATCTGGATGCGCCGCATGCGT
GTTCTGCGCAGAATGTTGCGGAAATACCGCGAGTCCAAGAAGATCGACAA
GCATCTGTACCACCAGCTGTACATGAAGGCGAAGGGTAACGTGTTCAAGA
ACAAGCGACTGATGATGGAGTACATCCACAAGAGGAAGGCCGAGAAGCAG
CGCTCCAAGCTGTTGGCTGACCAAGCCGAGGCCCGTAGGTCCAAGAACAA
GGACAAGCGCGCCAGGCGCGAAGAGCGCCTCGCTGCCAAGCGTGCGGAGA
TCCTCAAGGCGTACACCGGAGAGGAGGCCACCAAGAAGGCATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00063100BlTCONS00063100-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00063100-exon-Sc0000050-1564993656:626054..626191BlTCONS00063100-exon-Sc0000050-1564993656:626054..626191Branchiostoma lanceolatumexon
BlTCONS00063100-exon-Sc0000050-1564993656:625334..625440BlTCONS00063100-exon-Sc0000050-1564993656:625334..625440Branchiostoma lanceolatumexon
BlTCONS00063100-exon-Sc0000050-1564993656:625033..625155BlTCONS00063100-exon-Sc0000050-1564993656:625033..625155Branchiostoma lanceolatumexon
BlTCONS00063100-exon-Sc0000050-1564993656:624497..624617BlTCONS00063100-exon-Sc0000050-1564993656:624497..624617Branchiostoma lanceolatumexon
BlTCONS00063100-exon-Sc0000050-1564993656:624021..624131BlTCONS00063100-exon-Sc0000050-1564993656:624021..624131Branchiostoma lanceolatumexon
BlTCONS00063100-exon-Sc0000050-1564993656:623406..623576BlTCONS00063100-exon-Sc0000050-1564993656:623406..623576Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000050genomeSc0000050:623406..626191 -
Properties
Property NameValue
GeneIDBlCUFF030931