BlTCONS00063097 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00063097
Unique NameBlTCONS00063097
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000050:584505..586760-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00063097 ID=BlTCONS00063097|Name=BlTCONS00063097|organism=Branchiostoma lanceolatum|type=mRNA|length=2256bp|location=Sequence derived from alignment at Sc0000050:584505..586760- (Branchiostoma lanceolatum)
GGAAGGACCAACCAGACGCTTGGAATGCCGCATCTGTGGATCTCGTCAAG GCTGCTATGGTTAGGGAATGACTCTCTATCAAAGCTCATTGTTTCATTAT TTCTGATGTTAAACATGATACACAGTTATGAACACCGTGCAAGTAGATAA ATAGATGAGAAGAACTCAATAATTAAGATCTTTAACCTTGATGTCACCAG GCCCACAGCCATTACTTTGTGGTGAAGAACTTTGCGGAGAGGCTGACAGA CTCCGCACTGGACAGCTCCATCTCTGACGTCCTGACCAGGCTGTGTCAGC TGCACGCTCTACATGGACTGGTCACCAACAGTGGCGACTTTCTGGAGGTA TAATATACTTCGTAATGTCCACATGCCTCTCCACAAAGCTACACATTTTA CACATACCAGAAATATAGAAGAAAATTGGATGGTAGATCTGTTATGTTAC CAGAATGTTTTATCTCCAGGACCTGTAGTGACCATGCAGCCATGGCAAGG TTTGTTTTTGTGGGAAAGTTAGACTATTTTGGGGTAACGAACAAGAAACA AGAACACAATCTTACATTCATCAAACTACAGGTTGAAATGTCTTTTCAGA TGTTAATGTCAACTATTCTTTCTGTCAGGATGGCTACTTGACTGGCACAG ACATCCGCCAAGCCAGACGTCACATCAACGCCCTCATGGCCAAGCTCTGT CCTGACGCCGTGGCTCTTGTCGACGCCTTCGACTTCCCGGACGGGATCCT GAACTCCGTACTGGGGCGCTACGATGGGAACGTCTACGAACATCTGTTGG AGTGGGCCAAGGCCTCTCCTCTCAACAAAACAGATGTGAGTCAAAAGAAA CATGTTTGAAAAAAAACAGGCATGTTGCAATAGATATTGTGGACAGACAT CTCTACAAAATCAGATTTCATTCGGTTATGGCTTATTCCTGTACGTTACA TGTGTAGTTTCAGCATAGATCAATCACAGAGCACAAAACTGTTGACGACA GTTGTGTATAGATATAGATGGAGAAAACTGTGATGTCACTGGCTCTAAGG CTATCACTTTGAAAGATGTATTTTACACAAGTAAGTGTAAGAAGCGGTAT GTTATGATTTTACCATAAGAATTGTTGTAATACCTGACATACTTTTATCC CTAGGTGCACGAGTCTTACCACAAGTATCTGAAGCCGTTCCTTGAAGCTA ACAGGGCCAAGCTGTGAAGAGTCTTATGACTTAAGATTGATAAGAAGGCT CCAAGACAAGACGGCAGTGAAGATAAAGATCATCCCATACGGCTGCTTTT GCTGTTGCTTCTGCTGCTAAAATTAACAAATTTTCTATCACTGACTGTAA ACATCATGTTGTATTACCACGTGAATTTCTCAAACATTTGAAATGAAGTT AACGAACATGACAAACCTACCAGATCTAGAGGGAAATCTATTTTATGAGG TATCTTATCTTATGAGGGCATAATGAGATATTTTATTATATGGTTTTATT ATGGACACAATGAAAATTGTGTATATAATTGTTCTGGTGCAAGGTAGCCT GTGTGACAATCTCGGGCCGTTTGGGCCCCCTTCCCCAATGTTCCTGTGTT CTAACAGCCTTATATGGGAGAGCTGGAAAGATTCACATAAGTGCCATAAT GCACCGAATTTCCATGATATTCTGTATACAGATAGCTTGGACAAAGATGT ACACAATGAAATGTAACTTATTCAAATTAGGACTTAATTTTCATAATTGA GGAGGAAAATCTATATTTGCAGTGTTTTCTATAATATGACCTTAGTACAT GTGACATATGTAATTCGTGTCAGGTAGAACATCTACAGATACCAGTAATG TAAATAAGGGCTTAATTTGCATAATTAGTGCAAAAGTTCCTTTGTGGTAA ATGGTGAGAATTACATACGTGTAACATGTGTAAGTTAGTTGAAGGTATAC ACCACTATGTATAGATTATGTAAATGTGTCATAAGTTTTTATTTTGTATA ATTTATGATGAAATGTAAACATGGTATGCTGCCCAAAGAAATGACTTTCA CACATACAATATGTGTAATTTTGTTACAAGACCATCATTTAAAATAGATT ATGCTACTTACAGTCTTATTTGTATAATCAATGAGACAAGATAAAACAAT AAATCTACAAAGGCTCGAAATTATTCATGGAGGTCTCCGAACTCTTGTTT ATACATGTAGTAACACGCCAACCTTACCGTGCATTTCGTCTGTGGTAAGT AGGACC

Coding sequence (CDS) from alignment at Sc0000050:584505..586760-

>BlTCONS00063097 ID=BlTCONS00063097|Name=BlTCONS00063097|organism=Branchiostoma lanceolatum|type=CDS|length=453bp|location=Sequence derived from alignment at Sc0000050:584505..586760- (Branchiostoma lanceolatum)
AAGGACCAACCAGACGCTTGGAATGCCGCATCTGTGGATCTCGTCAAGGC
TGCTATGGCCCACAGCCATTACTTTGTGGTGAAGAACTTTGCGGAGAGGC
TGACAGACTCCGCACTGGACAGCTCCATCTCTGACGTCCTGACCAGGCTG
TGTCAGCTGCACGCTCTACATGGACTGGTCACCAACAGTGGCGACTTTCT
GGAGGATGGCTACTTGACTGGCACAGACATCCGCCAAGCCAGACGTCACA
TCAACGCCCTCATGGCCAAGCTCTGTCCTGACGCCGTGGCTCTTGTCGAC
GCCTTCGACTTCCCGGACGGGATCCTGAACTCCGTACTGGGGCGCTACGA
TGGGAACGTCTACGAACATCTGTTGGAGTGGGCCAAGGCCTCTCCTCTCA
ACAAAACAGATGGTGCACGAGTCTTACCACAAGTATCTGAAGCCGTTCCT
TGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00063097BlTCONS00063097-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00063097-exon-Sc0000050-1564993656:586702..586760BlTCONS00063097-exon-Sc0000050-1564993656:586702..586760Branchiostoma lanceolatumexon
BlTCONS00063097-exon-Sc0000050-1564993656:586414..586560BlTCONS00063097-exon-Sc0000050-1564993656:586414..586560Branchiostoma lanceolatumexon
BlTCONS00063097-exon-Sc0000050-1564993656:585925..586132BlTCONS00063097-exon-Sc0000050-1564993656:585925..586132Branchiostoma lanceolatumexon
BlTCONS00063097-exon-Sc0000050-1564993656:584505..585606BlTCONS00063097-exon-Sc0000050-1564993656:584505..585606Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000050genomeSc0000050:584505..586760 -
Properties
Property NameValue
GeneIDBlCUFF030930