BlTCONS00063076 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00063076
Unique NameBlTCONS00063076
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000050:537339..538529-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00063076 ID=BlTCONS00063076|Name=BlTCONS00063076|organism=Branchiostoma lanceolatum|type=mRNA|length=1191bp|location=Sequence derived from alignment at Sc0000050:537339..538529- (Branchiostoma lanceolatum)
TGTAGTGCCTGGTGGCACACTTATTTCCCAGGCTGTGACATGTGACGGGA
AACGTAAAGTGACTATAACACTGCCATCTGTCTGTCAGGGCGCCTCGTGG
TCATGTACGGAAGTAGGAAAAACAGACCAGTTAGACACCATAGTGGCAGA
AAAAAGTGTAAAGTTCTACTCGTGGTATGGTTGGTATGGTTCCTAGTGGC
ACATAGGGCAGCAAGTTTCCTTCCACAAATTTGAGTTTTGTGTTCAAAAG
GCGTGCTTGATCAAGGAAATTGCGTTAACAAAATAACCTCCGTCTCATCA
CTCCAGCTGATGGCGCACCCGTCCTCCAGCAGGCCATCCTGCCTCTGAGG
ACCGACAGCCAGTGCAGCAGCTCCTGGGGCAGGAACTACGACTCCGCCAG
CATGCTCTGTGCGGGGCTCAATGGCTCTAGCGGATGCATGGTAAGACTTT
TTTTAACATTGTAACAGCCAAACACTGTGTTAGAAAAGAACACTATTACT
GTAAATCCGAGGTCTAAAATGGTTCATGCATGCATGAGGCTGACACATCT
AGCTGACACATGTGGCTGCCTGTCCTGGTTTTCTAGGACGAATGCTCCGA
GAAGGGGGGGGGGGGGCTGCATGACCCAATTTTTATCCTAAGTGCTGCTG
ACTAACATTTCAAACATTCCTTTGGACTAGAAATTCCTGTGGATACATTC
CTGAAAAAATCCTAGAATTCTTGCCGACTGCACACAATACTATACCATTA
GGCTCACTCCTGAGGCGTCGCCATGGAGGGATAAGGGAGAGGGCAGCATA
AATAGAACCTCTGCTTGGAGAATAATTTGTTTTTTTCCTTACCTACCAGG
GAGACTCCGGCGGTCCGTTTGTCTGTGAGAGGAACGGTGCGTATGACGTG
GTGGGGCTAGTGTCCTGGGGATCCAGCTCCTGCAGCCTCTCCTACCCGAC
AGTCTTCGCGCGTGTCGCCGCCTACAGAGGCTGGATCGAGCAGAAGACCG
GGCTGACCTTCTGATTGGTCACCTGAAGCCGTCTGCTGGGTCTCCATTGG
TCGAATCCCAAAACCGCATCGACCAATCACAATCATCTCATTGGTTTATT
TAGTCAGATTTTTGCCTGACAGAGACCCAGATCTCAAACGGCGCTGTCTG
CATTTCGCTCAATAAAGCGAATGATCCATCTGAAAAAAAGT

Coding sequence (CDS) from alignment at Sc0000050:537339..538529-

>BlTCONS00063076 ID=BlTCONS00063076|Name=BlTCONS00063076|organism=Branchiostoma lanceolatum|type=CDS|length=351bp|location=Sequence derived from alignment at Sc0000050:537339..538529- (Branchiostoma lanceolatum)
GTAGTGCCTGGTGGCACACTTATTTCCCAGGCTGTGACATGTGACGGGAA
ACCTGATGGCGCACCCGTCCTCCAGCAGGCCATCCTGCCTCTGAGGACCG
ACAGCCAGTGCAGCAGCTCCTGGGGCAGGAACTACGACTCCGCCAGCATG
CTCTGTGCGGGGCTCAATGGCTCTAGCGGATGCATGGGAGACTCCGGCGG
TCCGTTTGTCTGTGAGAGGAACGGTGCGTATGACGTGGTGGGGCTAGTGT
CCTGGGGATCCAGCTCCTGCAGCCTCTCCTACCCGACAGTCTTCGCGCGT
GTCGCCGCCTACAGAGGCTGGATCGAGCAGAAGACCGGGCTGACCTTCTG
A
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00063076BlTCONS00063076-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00063076-exon-Sc0000050-1564993656:538477..538529BlTCONS00063076-exon-Sc0000050-1564993656:538477..538529Branchiostoma lanceolatumexon
BlTCONS00063076-exon-Sc0000050-1564993656:538090..538223BlTCONS00063076-exon-Sc0000050-1564993656:538090..538223Branchiostoma lanceolatumexon
BlTCONS00063076-exon-Sc0000050-1564993656:537339..537680BlTCONS00063076-exon-Sc0000050-1564993656:537339..537680Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000050genomeSc0000050:537339..538529 -
Properties
Property NameValue
GeneIDBlCUFF030927