BlTCONS00062990 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00062990
Unique NameBlTCONS00062990
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000050:32015..33824-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00062990 ID=BlTCONS00062990|Name=BlTCONS00062990|organism=Branchiostoma lanceolatum|type=mRNA|length=1810bp|location=Sequence derived from alignment at Sc0000050:32015..33824- (Branchiostoma lanceolatum)
CGCCTGCCCAGATTTGTCAGGTCACGTTTGTTTTGGAGCGGGAGGACCAG
ACAAAAACATGCCGAAACCCAACACTCTCCTCAACTATTTCTCCAAGTCT
CCTGCCGCAGCCAAGAACAAGTCTTCCCCGACCGTCGGAGACACTCCAGA
GTTTAAGGAGAAGGGGAATTCGCCAAAGGAAGGAGCAAAATCCACCAAGA
CATCGCCGAAATCTGCCAAACAAAATGGCGGTACGGGTAAGCTTGTCTTT
AAATCGGTGTCAAATAGACCCTATATAACCCGTGCACTCGTTTTATAACA
AAGGGCCTTTTCTATTTGATTCTATTTTTGATGTTCAGAATGTTTGCCGA
GGAGATTTGAAATCGATGACTGCAGAAGCGCATGGTGCCGTGAAGAAAGT
CGTGGGGAGGGGGGCGTGTTTGATTAAAATACGTATTTGCATGTTGGATA
ATTTTTACTCCTTTGCTGCTGTGTCCTTTTTGTCTAGCTGTGCACTATGA
ACCAATAATCACCCAGTCTGATGTACATAGATTTGAATTGATTCTGTGCT
ATATTTACAGCTGTACAGTACCAGCCAGGAGACCTTCTATGGGCTAAACT
GTCGGGCTACCCGTGGTGGCCCAGCCTGGTGTGTGATCACCCCACCACAG
GGACACACATCAAGCCTGGCAAGACCCCCATGGTGCACGTGCAGTTCTTT
GATGAGCCACCCAGTCGCTCCTGGATCAGCCACAAGTGAGCTCAGATTAA
TTGTCCCATTTTCAATCTCAAATCAACTGTATTACATGTACTGGAAGTTG
CTAAGAAGGGGAGGGGGGATTGCATTTAGCATCAATGAACAGATAATCTT
CCACTGGTTGTGACAGAGAAAGAAGACAGATCAGATGCTATGTGCAATAT
ATTCAGGTTCATTTTACTGAGGAAGATCCTCCTGCTCTTATTGACAAGTA
CAACAAACAGTGAACCACAACTTAATGTTCCATCCTAAGGACAATAATCT
ACATGTTTGATGAGTAACAACAGGCGGGATTCGAACTCCCAACCTCATGG
TCCGAGGCAAGGCCACTAACCATTGGACTATGCACACTGTACTAACAGAT
GACCCTTTGCTTGAAGACTAAAACCTTCCCAACCATTCCCAGGATGACCA
AGCCCTTCTCCGAGGCCACAGCCAAGGATGCTGGTCCCGGCGGGCCTCTC
TTCACCCCTAACCCGAAGGTCCAGCGCGGCGCGAAGAACGCAGCAGGAGC
GCTGCAGCTGAGCCGTGAGGACCGCCTGGAGCTCGTCGTGGAGCTGCTGC
CCTCCGAAGACGAGGACGACATGGATGTAGATGGTAACTATGGCAACCAG
GTTGATTTCCACAGTTACCATGGCAACTGACTTGATTTTGTTGTGTCCAT
GGCAACTTTGTTGATTATGGCATGGGGCAAGATGTTTATGTGTATCATAG
TCATAACCATTTAGAATTTTTTAAGGTAGCCGATAGTAGAGTTTTCTTAG
ATGTACAGTTAGACCTGTACAAGTGTCCACCTCTACATAGGGACCACTTT
ACTATTGATATACATGTACAGTCAAACCTGTACAAGTGACCACCTCTACA
TTAAGACCACCTGGCCATTGATATACAGCCTTCTTGGGCAGGTTTGCCTA
TATAAGCATGGCACTGCACAGATGGATTAAATGATTGTCATACATGTAAA
CGTATGCTGTTGTGGTATTGTTAACTTCTCCTGTTCTTCTCTCAGATGTC
CCCAATGGTGCGGATGAGGAGACTGGGAGTGAGTGTGAGGAGGAGGTGGC
TACAAAAAAG

Coding sequence (CDS) from alignment at Sc0000050:32015..33824-

>BlTCONS00062990 ID=BlTCONS00062990|Name=BlTCONS00062990|organism=Branchiostoma lanceolatum|type=CDS|length=660bp|location=Sequence derived from alignment at Sc0000050:32015..33824- (Branchiostoma lanceolatum)
GCCTGCCCAGATTTGTCAGGTCACGTTTGTTTTGGAGCGGGAGGACCAGA
CAAAAACATGCCGAAACCCAACACTCTCCTCAACTATTTCTCCAAGTCTC
CTGCCGCAGCCAAGAACAAGTCTTCCCCGACCGTCGGAGACACTCCAGAG
TTTAAGGAGAAGGGGAATTCGCCAAAGGAAGGAGCAAAATCCACCAAGAC
ATCGCCGAAATCTGCCAAACAAAATGGCGCTGTACAGTACCAGCCAGGAG
ACCTTCTATGGGCTAAACTGTCGGGCTACCCGTGGTGGCCCAGCCTGGTG
TGTGATCACCCCACCACAGGGACACACATCAAGCCTGGCAAGACCCCCAT
GGTGCACGTGCAGTTCTTTGATGAGCCACCCAGTCGCTCCTGGATCAGCC
ACAAGATGACCAAGCCCTTCTCCGAGGCCACAGCCAAGGATGCTGGTCCC
GGCGGGCCTCTCTTCACCCCTAACCCGAAGGTCCAGCGCGGCGCGAAGAA
CGCAGCAGGAGCGCTGCAGCTGAGCCGTGAGGACCGCCTGGAGCTCGTCG
TGGAGCTGCTGCCCTCCGAAGACGAGGACGACATGGATGTAGATGATGTC
CCCAATGGTGCGGATGAGGAGACTGGGAGTGAGTGTGAGGAGGAGGTGGC
TACAAAAAAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00062990BlTCONS00062990-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00062990-exon-Sc0000050-1564993656:33595..33824BlTCONS00062990-exon-Sc0000050-1564993656:33595..33824Branchiostoma lanceolatumexon
BlTCONS00062990-exon-Sc0000050-1564993656:33090..33264BlTCONS00062990-exon-Sc0000050-1564993656:33090..33264Branchiostoma lanceolatumexon
BlTCONS00062990-exon-Sc0000050-1564993656:32492..32682BlTCONS00062990-exon-Sc0000050-1564993656:32492..32682Branchiostoma lanceolatumexon
BlTCONS00062990-exon-Sc0000050-1564993656:32015..32079BlTCONS00062990-exon-Sc0000050-1564993656:32015..32079Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000050genomeSc0000050:32015..33824 -
Properties
Property NameValue
GeneIDBlCUFF030901