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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000050:1685912..1692221+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00062923 ID=BlTCONS00062923|Name=BlTCONS00062923|organism=Branchiostoma lanceolatum|type=mRNA|length=6310bp|location=Sequence derived from alignment at Sc0000050:1685912..1692221+ (Branchiostoma lanceolatum)
GTCCATCTGGAGTACTTCAAGCGTTTCCTGATGTCGGAAGGTTCGGAGGC
GCCCCTGCTGTTCTGGATCGCGGTGGAGAACATGCGTGTCCACAGCAAGG
ACAACAGGGAGAAACAGAGCAAGGCAACGCAGATCGTCAGGAGGTACTTC
AGCAAACAGGCTGGCAAAGGTAGGATCTTCCGGTGTTTTTTTTTGATACT
GTAAAATGAATTAATTCATCAGGCCTCAAAATAGTGGGTGCATGTGCACC
TGTGTGCACCCAAATTTGGAGCTGTGCACCTAATTTCTGACTGTGGGTGC
ACCAGTGCACCTAGATATTTTTGTAGGCTATAAGGTAAGGGTACTATTGT
ACACTAGTATACAGAAAATACTCTTGAAATGTAAGTATCTTGACTTACTT
GACTTTTAGACAGAATAGCTAAAATTACCCTTTGTTGTATTTTACTTGAT
GTATCTAGTTAGCTATAGAGTGACAGATAGTAGTTCTTAAGAGCGTTAAA
CTTGGTAATTTTGTTTCGCTGACATTCAACTTTATTCTATGTGGTGCACC
CAAAATCTTTTCTGTGCACCTATTTTTTTTTGTCGGGTGCACCAGTGCAC
CTATTTCAAAAAATGTATTTCGAGCCCTGATTCATTATTGTGGCAACTTG
ACCTTACGGTATGAGGGGAAAGCATTGCATTGTTTTAAGTTTTGAAGTTG
ACACAATTCTGCAATGTCTGACCATTTACAAAATCTATCAAGTTGCTCGC
GTAACTTTTGTATTGTGTATCTACCTAGATGGCTAACCTTTATCAAAATA
TTCCCCAATAAGGCCTGAGCCCTGAGAAGTCATTGTCAACTTTAAATCTT
GTCGACACTAACAACTGGTACTTGTACATATTACATTGTACATATCTATT
CTATACTTTTTGTTGACTTTGTATAAGTCAAAAATTGTACACTTCGGCAC
AATTCAGCTTTTGCTGCAAGGCTGATTTGTTTTATCAAATAAATCAATAA
CTACCGTAAAATTCCTATTTACTTACGCACCCCTCCTAACGTATGCACCC
CTAATTTGGGGACGATTGCAAGCCTGACTCAGTGAGTTGAAATGTTTTGG
TGGATAGTTAAGAGGTTGACATGATCATCCTTCCGATGATGTTTACCGAC
TGAAAGGGTTACTGAGAAAATGTTTCTGGGTAAAAAATATAAAACAATTT
AAATATATGTATTATTTATTCTTTATTACTGATTGATTGTGTGGTAGAGT
TCCACACTTCATTTGCATGAAGATGTACCGTGCTCTCATGCTGATATGCG
ATTTTTCCGAGGAAGAACCCCTCCTAACGTACGCACCCGACTTTGGTGTC
GGCCTGGAGCACCTGCTTGCAACTTGAAAAGTTTAAAAAGTGCGTACGTA
AATAGGGATTTTACGGTACTTCTACCTATTCCCTCCAGGTGTGGCCCTCC
AGTGTGAGGCGCAGGTGATCAGGGATATTGCTAAGATGGGGAGCATCACT
CCTGCCATGCTGCTGTCTGCTCAGGCTGCTGTGGGAAAGTCACTGGGCGA
TCGCTGGTAAACAGTTGTTCTCATTGCTCAATCTTATTCCTGCTGTAAGT
TACTGTAAATGCACAAATGTTCGCGGTAGTTTTATGTTCGCGGTGAAGAG
TTCGCCGCGAACTTAAGACCACTGCGAAAAGCCGTTCCATTGTGTGACTG
TAGCGCTACTATTGTTTCAAACGCGAACTCGAAACCACCGCGAACACTCC
ATTTTCTCCTTACTGCGAAATTAAAACCCCGCAAACATTTCTGCATTTAC
AGTGATTTATTTTCCAGAGATTTTTAACATCGTGGTTTTCACAGAGACCT
TATTTTTGCGAACTCATCTCCTTCCCCACACCTCCCGTCCCAAAATACAT
GCACGAGTGTGCTGTCAACACCTACAATATCTACAACATCAATATTGCTG
TTTTGCTGATATTCCATCTTCGTCTGTTCATGTTCAGGTATGAAAGGTAC
AGGGATTGTTTCCCAGACGACAGCACTACAGACTTACAGGTGGAAGAGGA
CGAGGAAACTTATTCACCTGTAGAGAAATCCAAACCAAAAGTCATCAGTC
TGAAAGCAAAAACGGTCAGTGCCCGGGAGTCAGGGACAGAAATAGCATTT
TAACACCAGAAACAGTATTGCAGTACAAGGGACGAGGATAGCATTTAAGT
ACCAAGGACATGGATAGCCTTTCAGGACGAGGGACAGCATTTAGTACCAG
GGACAGGATAGCATTCCAGTTACTGGAGACAGGGATAGTCTTTCAGTACC
AGGGATAGGGATAGTATTTCAGTACCAGGGACAGGGATAGTATTTCAGTA
CCAGGGACAGGGATAGTATTTCAGTACCAGGGACAGGGATAGCCTTTCAG
GACCAGGGACAGCATTTAGTACCAGGGACAGGATAGAATTTCAGTGCCGG
AGACAGGGATAGCATTTCAGTACCAGGGACAGGGATAGCATTTCAGTACC
AGGGACAGGGACAGCATTTCAGGGACAGGGATAGCATTTCAGTACCGGAG
ACAGGGATAGCATTTCATCACTAGAGACAGGGATATCATTTCAGTACCAG
GGACAGCATTTTAATGCCAGAGGCAGCATTTACTACCAGGGACAGGATAG
CATTTCAGTACTGGAGACAGGGATAGTATTTCAGTACTAAAGACAGGGAT
CAGACATTTATTGCCTTATGTAGCCCGTAACCCTTTTCCTCATGCAGAGA
GCCATCTGTTTTGCTATCGTCCGTTCCATCATCGCCCTGAGACAAGCCTT
ACACAGGAGGCTACAGAGTCAGGAGTTTGAAGACTATCTCAGAGCTGAGA
GCTTCAGGCCCAACTCTGCAAGTAAGATTTTTTTTCAAGTCAAATCTAGA
TCTAAATTAAACTGTAAAAAAGAGACATGTATGTTATAATTCCTTCTCAT
GTTATAGCACACGAGCCAAAGTGAAGCTATTGTATTACTAGCTAACTAAA
ATGCTTCATTCTCAGTCTGAGGTTAGGCCGCTTTACCTTATGAATTCAGT
TATGGGAAAAGGCAAAATGTTGTGTCTCCACTGAATTTTGTCTAGAAATG
CATTTTTCTTGTTGAAACTCATATAACGTCAACTCATAATTCCACTGGGT
ATGCTAAAAGTGCCACATTCTTAGAAAACAATGAGTTTGAAGAGATCTAC
TAATACAGCATCAGTAATCCCTGAGGTATGCACACTTCAGGTATCCATGT
GTTCAAAACTTTCTTGAGAAGGCCTTGATAACACTTTTCTTTATGCGGTG
ATCTTGGGGTACCCAGCAAAATGATGAGAGCGGATGTTACAATATACATG
TAGCTTATACGCCAAAAATAGTTAGCTCAGTCACTGACGAAAGATAGCGG
ATGCTGTCTGAAACGTCTGACTGTTTCAAAATCTTAGCAGGTTGCTTGAG
TAACTATTTTTGGCTTATCTCATTACCTTCATTAACGCACGTAGCTTATA
GTCTGTGTTGTGCAAAAAAAAACTAAAGTTGTCTTTGCTTCACTTCATAA
GACATTGCAACTCCTAACCAACCGAAGATCAGGGATTTCGAGGCCCACGA
CTTCTTAGAGGTTGAAGATGTGAAGGAGAAGAAGCCTCGACTGACGAGAC
GGTTCACCGGAGGTCGGGTCATCTTTGTGGAGAAGCTGCCAAAGGATGTG
GCTTTCTTTAAGGAAGTAGAATGGTAGGCAACTTCTAGTATACCTTATAG
ATGTAACATCAGGTACTGGTACAGAGGTTAAGGTACAGGACCGGACCTGT
ATCTGTACCTGAACTATTTGACAGAGTCACCTGAAGTCTTCAATGATGAC
AGAAACATGAATATTAGTTAACAAACTGATTATTTGAATAGCTATTCTGT
ATCTGTATAGCCCATATAGCCGCCCTGCGGCGTAACACGCCAGCTTCGCA
GGCACGTGGTGCGGCAGCAGCTGGTCATCTAATATGCTTCAAGTATCTTA
TGCAGATACTTTCCAAAGCATCTCAAAACCGAAAGTGTTGATTTCAACGT
CTATACAATTCTTTCATCTTTTTGCTAAATTTTTATCTTTGTGGTAGGAA
GAACACTTTAAGTAACAAAACGTTATACACTTCAGTGTAAGTCTATCCAG
GTATAGTTTTTGCAGTGTGATTTCCTGTTGTTTTTCCAGCTACATCGCCC
TTGCAGATGAGGTGGCTAAGAACGCCCAGTCTGGTGAGTACTCCATGGAC
GAGGATGAATTGCTGAAAAGGAAAGCCTCCGCCATCATAAAGTGTTTCCT
GGAGTCTTCTGTTCCCCCAAGGGTTCAGGTAGGTCCATGGGGACTTGTTG
TTATTGTTCACCTTGTAGTGCCTAGTGGCACATGGGTCTGCAAGTTTCTT
AGTTGAGACAAGTTTCCTTGCTGTTTCTGTAGCAGGGTATATTTTCTATA
GGGAGGGGTTGGTCAAGGCACCTCCATAAAATGGGACCCCTATTTTACGT
CCCTTCCGAAAGACAGGTGCAGCCCCAACCAAGATATCCTGACTCACAAT
TGAGCCACGGTCTCCCAGTAACAAAATAATAGGAACCAGGAGCTAAACAA
AGGCTGCTAGCAGTTGAGCTACAGGGCCATCCCTAGGCCCCTGTATAGAT
GATGTACTGTAAATCTTTAGATATTTGCAGTAGTTTTATTTTAGCCCCAC
TGTTGTATCGAGTGGCTGAGTGCCTATACTAGCACACATGAGATCAAGAG
GTCAATGGTTTGATTCCTAGATGTGTGTGTGTGTGTGACTGTGTGTGTGT
GACTGTGTGTGTGACTGTGACTGGGAATGTATGTGTGTGTGTGTACGTGT
TGGTGGAGTGTGTGTGCCTTTTTCATTATGGTGTGCGCATGACTGTGTTT
TGTATATGGCCTATCATTACAGTGACCGTATAATGTCTATCACCACAGAT
AAACATCCCACCAGAAATGGCCTCTCACATCGTAGCGGATGCGAATCGTG
GCTTCTGCGACCGTGGACTGTTCTACGACGCAGTCATGACCATCTTTCCC
ACCCTGGTGCACTTCTGGAAAAAGTGTGTACACTAAAGATTTACTATAGT
ACAGCCCTAAAATGATTTATACCCATACAAAAAGACTATTTTAGTATAGG
TCTCAAATGATGAATACCCATTTCTTTGGAAAAAATGTTCATAACTCTTG
CAGAAAGTCATGATTTAGAATACAGCACACTACACAACATCTACTATCGG
GTCAACAGTTCAAGTTTGTGTATGGAAATACAGTAAATGCAGAGATGTTC
ATGGTGTTTTATGTTATTTACAGTTTTCGCAGTGGACTCTTTACGACCGC
TCAGGTAATCAATCAAAATTGATTGATTGGTTGATTTTTTTTTATTTGCA
GGTTTTGTCGTGAGAAGAACGACCTTTCCCTCCATGAAGACTGGAGGCTG
GCGCTGAAGAAAAAGACTTTCAACTTCCCCGACTACCTGAACATGAACAC
AAAGTCGCCGTTCGTCAGGATTCCTGGGATTTCATGTACGTTTTTGACTT
TCTGTTTTCAAATTTTTGGAAGACTGAAGTTGGAACAGTCGAAAATCTAG
GTAAACCCAATGTTTGTGTTGGAAAGTACAGTTCAACCTTGCTTCAGAAG
GATTGCTACCAACGCAGATGAAATCATGTTACAGTAGCGTGCATAGTCCA
GTGGTTAGCAACTCTGCCTCTGCCAAGAGTTTGGGAGTTTGAATCCTGGC
TGTTGTCGCTCACCCGACATGCACGCTACTGAAAAGGGTCACAGTCCGGG
ACGATCCACTGTTCGTTGTACCTGTTGAAAAGACTGTCTGATTTTCTCCT
TCCATAGTTTCGGACCCGCCGCGGCTCCTGTTCTCCATGGCGCAGGGTCC
ACGGTTCATCGCTCCTCCCAAACTGCCAGAGAACGATGACGCGCCCGATG
ATCTGATGGTGTACCTATCTGCACGTGGCGACGTTGTCAGGGGGTTGTCC
CCGAGTAATTTGCATTAATGACACATGCAGGAAAATGTGTGTGAAAATAA
AACAGAACTTGTGATACAAGAGATCTTATCGTTTCTCATGTGATGGACTG
TTCTGTATGTTGGAATAGATTTACAATCTTCGTCTTCAATGTAGCTTTGA
AACACCAAAGCAGCTAGTTTGGCGTACTTTGAGCTTTTGCTGAGATATCA
TTATTATGTTTACCTTCACATTCATATTGTTTTTGGTTCGTTTCTTCTTC
AATGGTTTGAATCCCTGTCCCTTCCCTTCTCCAATAAAAGAAACAGGCAG
TATAAGACCC Coding sequence (CDS) from alignment at Sc0000050:1685912..1692221+ >BlTCONS00062923 ID=BlTCONS00062923|Name=BlTCONS00062923|organism=Branchiostoma lanceolatum|type=CDS|length=789bp|location=Sequence derived from alignment at Sc0000050:1685912..1692221+ (Branchiostoma lanceolatum)
GTCCATCTGGAGTACTTCAAGCGTTTCCTGATGTCGGAAGGTTCGGAGGC
GCCCCTGCTGTTCTGGATCGCGGTGGAGAACATGCGTGTCCACAGCAAGG
ACAACAGGGAGAAACAGAGCAAGGCAACGCAGATCGTCAGGAGGTACTTC
AGCAAACAGGCTGGCAAAGGTGTGGCCCTCCAGTGTGAGGCGCAGGTGAT
CAGGGATATTGCTAAGATGGGGAGCATCACTCCTGCCATGCTGCTGTCTG
CTCAGGCTGCTGTGGGAAAGTCACTGGGCGATCGCTGGTATGAAAGGTAC
AGGGATTGTTTCCCAGACGACAGCACTACAGACTTACAGGTGGAAGAGGA
CGAGGAAACTTATTCACCTGTAGAGAAATCCAAACCAAAAGTCATCAGTC
TGAAAGCAAAAACGAGAGCCATCTGTTTTGCTATCGTCCGTTCCATCATC
GCCCTGAGACAAGCCTTACACAGGAGGCTACAGAGTCAGGAGTTTGAAGA
CTATCTCAGAGCTGAGAGCTTCAGGCCCAACTCTGCAAACATTGCAACTC
CTAACCAACCGAAGATCAGGGATTTCGAGGCCCACGACTTCTTAGAGGTT
GAAGATGTGAAGGAGAAGAAGCCTCGACTGACGAGACGGTTCACCGGAGG
TCGGGTCATCTTTGTGGAGAAGCTGCCAAAGGATGTGGCTTTCTTTAAGG
AAGTAGAATGGTCTACATCGCCCTTGCAGATGAGGTGGCTAAGAACGCCC
AGTCTGGTGAGTACTCCATGGACGAGGATGAATTGCTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00062923-exon-Sc0000050-1564993656:1685912..1686080 | BlTCONS00062923-exon-Sc0000050-1564993656:1685912..1686080 | Branchiostoma lanceolatum | exon |
| BlTCONS00062923-exon-Sc0000050-1564993656:1687350..1687467 | BlTCONS00062923-exon-Sc0000050-1564993656:1687350..1687467 | Branchiostoma lanceolatum | exon |
| BlTCONS00062923-exon-Sc0000050-1564993656:1687899..1688025 | BlTCONS00062923-exon-Sc0000050-1564993656:1687899..1688025 | Branchiostoma lanceolatum | exon |
| BlTCONS00062923-exon-Sc0000050-1564993656:1688659..1688782 | BlTCONS00062923-exon-Sc0000050-1564993656:1688659..1688782 | Branchiostoma lanceolatum | exon |
| BlTCONS00062923-exon-Sc0000050-1564993656:1689463..1689636 | BlTCONS00062923-exon-Sc0000050-1564993656:1689463..1689636 | Branchiostoma lanceolatum | exon |
| BlTCONS00062923-exon-Sc0000050-1564993656:1690101..1690239 | BlTCONS00062923-exon-Sc0000050-1564993656:1690101..1690239 | Branchiostoma lanceolatum | exon |
| BlTCONS00062923-exon-Sc0000050-1564993656:1690860..1690984 | BlTCONS00062923-exon-Sc0000050-1564993656:1690860..1690984 | Branchiostoma lanceolatum | exon |
| BlTCONS00062923-exon-Sc0000050-1564993656:1691313..1691446 | BlTCONS00062923-exon-Sc0000050-1564993656:1691313..1691446 | Branchiostoma lanceolatum | exon |
| BlTCONS00062923-exon-Sc0000050-1564993656:1691769..1692221 | BlTCONS00062923-exon-Sc0000050-1564993656:1691769..1692221 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000050 | genome | Sc0000050:1685912..1692221 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030885 |
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