|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000050:1661207..1666616+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00062915 ID=BlTCONS00062915|Name=BlTCONS00062915|organism=Branchiostoma lanceolatum|type=mRNA|length=5410bp|location=Sequence derived from alignment at Sc0000050:1661207..1666616+ (Branchiostoma lanceolatum)
TAGAAGGTCAAGTTTGAAAATAATTTACCTTGCGTTTTTCAACAGTACTG
CAGCGGCCTTTTAATTTTTGTGTGTTTGTATGTAGGCAAAAAAAGTGACG
GAAACGTTGATGGATCTTCATGATTTTTGGCAGGTGTGTAGCGGTTGTGG
GAACGGAGGTCAAGTTTAAAAATGGTTTCCCTGGCATTTTCAGTCGGTAC
TGCAGCGGGCTTTGTGTGTATGTGTATTTGTATATGGACATCATAACTCG
TAAAGCTGTCAACAGTTCTGTATGATATTTAGTGGATGGGTAGGGTTTAC
AGAAAGGAAGGTCAAGTTCGATAATGGGCCTTCTAACTAAAGGAAAGTTT
GTAAATCTACTGCAAGTCATAATGGGACATGTGACAGTGTTCCTGAAAAC
AGCTCAGGCATTGCCTAAAAGAATAAAGAAACAGATGGGGCATATAAATA
AACAGATGGAACACCCACTACACTCCAAGTAGAGGTGTGGGTCTGGTTGG
TTTTCTAACTTGTTCAGTTTAGGCATTTTTGTCCAACACACGGTTGGCGA
CATAACGAAAAGGGGACAAAATAAAACGCCTGACAAAAACACCTAAAACA
TGTCAAAAACCAGCCGGACCCACTCCTCTGCTAGCTTGGAGAGTACACTG
CACCAAAACTGCACCACTGCTAGGTATGGAAAAGTCACATGTACTATTTC
TTTAGAAATGTGGATGATATGGAATAAATATTTATTCTATTCATATATAT
TGACTGTACCATTTCATCATCACTTTCAATATTTTATGACCAGTTATAAC
ATATATCAGCACACTAGACACATATACTAGTCCTGTACACCAAATGATTT
TTAACCCTATCTAGACTAGACGCATTCTCACCCCATCATAACTTCCAGAC
GGTATGGTGTATGATCAAATTTGCAGGGGGTGATAAGCATGTAAATATTG
ATCACTCTCCATAATAAGCCTTGATTATTTGGTGAAGATAATGTGTTCGT
GGAACTCTAGTTAGAAATGTTTTCGTTACTCTTTTTCCCTCTTTTTCAGC
ATATGAAGGTGGAACAGCCAGCTTATCCCTGAATGCATCTTTTCCCAGCT
TCAATAACGCCAGTGCTGATGATGTTTTTTTGAGTAGACTCCAGATTCCG
AGCCCTGAAATTGTCATGGAGTGGCGACCTCCAAGTATGTTTATTATTCT
TACTAATATCATAGAGGCTAACATTTGCAAGCAATGTTTAGATATACATG
TAGCACCTTCTTTTTTGTATATACTTATTATTGCATAAAACACACAGAAA
TCGGTTATGCAAATTAGCGAATTCTACTGTATTTCACATGAATCAATGAG
TGTGCAGAACCAAAGAGCCCACATTTGAAATGAGGTGAATATCTTGCAAA
ATTAAGTCCCAGCAAAATTAAATGAATATCCATGGACATATACAGATACT
GTATTATATTTATCCCCCCAGGGTCCTCTGTACAGAATACAAGATTGATA
CATCTACTGGACCAATTCGAGGGCCGCCTCAACATGACAAGGAGAGGAGA
AGACCTGGCCGCTGAGATTAGAAATTTACGACCAGAAGATGCTGGCATCT
ACCAATTTAGTCAATCTCTCCAAAAAGGAGAAGAGATGGACTTGAAGGTC
ATTGGTAAGTGTCAACGTAGTGTAGATACATGTAATTACAAAGCTTTTAA
TTAAGCTTTCAATTCTTAAGTTTAAGTAGAGAGGATTTGCCAATGCAACT
CCCTTGTAGACAGCTAACAGTTCTAACCTAGATCAACAGGTTACAACTGT
TCACTCAGCTGTAATGGTAGTACATGTAATTATTTGGAGTCCTGAGTGTA
CAAAATCAGTGGCCAAGGCTCCTAAGGTTCTGCATGAATTAATCATACTG
ATCCATACCTTATAGTTTTCTTGTTTGTGTCTCTAAACTACAGGTATACA
TGTGACTGGTCCACAAAATCCAGTCTTAGAAGGACAGACGGCGAACCTGA
CCTGCTCTGTAGATGATCCCAACCCCGGCAACTTCACCTGGATCCATGAA
GAGACTGGAGAGGCTCTCAATGGGTCCCTACAGGGAGACCTGTACACTGC
TGTGGTTCATGTTGGACCAAACAGTGCAGGGAACTATACTTGCAGAGTTA
CAGGTGACAGTGGGGAAGGTCACAAGAGTATATCTCTTCTGGTGAAAGGT
GAGCTCATCAGTCTAGTTCAGAATATGCATGTATGGCTAAGGCTGTGCCA
GATTTAAAGTTGAATCTTTTGTATGTAGAGCCAATTGTTGCAGTCAGACA
GTACCAATACGGGTATGTCTTAGCATCAAGTACATTGCCCATTGGATTTA
CATGCTCATAATGTGACATGGTTTTATTATTCAATATTTTACAGTAAAAC
AAACAAACAGCCTTGCAGGTAACCAATGGTAACCTGAATTGCGCTGGAGG
CTACAGTTAAATATATACATTGAAAGAGAGAGATTACAGTCCGATAGTTT
AAAATCGCAATTTCTATTGTATAATTAATTTCATCTGTTCGTTTACAGAC
TGAATTATTATCTTCAACCAAGATTGCATAATTCATTTAGTACAAACGGT
AGTAATATATCGATAAACTACATACATAAAATCAATTCCTACATTTTGTT
CATTTATATAAAGGACACATTAAAACATTAATAACATGGTGCATAAAACT
TGATAAACGAGATAAACGAGAAGGTCTTCAGGTGTTTACATGTAGATGAC
ATTAAGTGTACAGTTCGTTCAGAAGGTTTGTCATGTATGGTATGGGGCTT
CTTTTGTACCTGTCCGTTCGGGTTTTGATTATGTCGAGAAGTTGTGATGA
CCGTGTTGATCTACCGCTGATGTCGCCGCGGTATGGAGGTAGCCAGTCTC
TAAAAGTGTCTGAATGCAGCAGGCGTTTGGCAAAGTTCAAGCACAGCTGG
CGGCGTCGGCTATATAAAGTAGGTAGATCGAGGACTTGGCATGCCTCGGT
GTAAGATGAGTAAGCGGGTCCAAGTATTGTCCGGCAAGCCCTTTTCTGTA
TTGTCTCAATCCTCGCCTGTTGTTTCTTTGTAATACCCGGATGCCAAGCA
GGGACGGCGTACTCGCAAGCCGGTCTAACCATGGTCTTGTAACAAGTGAG
CAGATCTTCTCGAGAAAGGTTGAGGTGGCGTAGCTGACGGAGCAGGAATA
GTTTTGTATTACCTGACTTGACGACATGGTCAACTTGTGTTTCTCAGCCA
AGGTCTGCCTGCACAAATAATTCAAGTAACTTAACGACTTTAACTTCGTT
CAATGGTTTGCCGGCGATGTATAAAGTTGATGGCGTAGGGGCGACTTTGG
TGAAGTACAAATGTATTACTTTGCACTTCTTTGGATTCAGTTTCATTCTC
CGTGCTTTAGTCCAGGTGTCTAGGTTGTCAAGATCAGTTTGGAGACAGGT
GGTTGCATTGACTTTTCGGCTTCTGCTAGATTAAGATCATCGACGAACTT
CCACCTTCTTGCTAAGGCGTCTACACTAGCGTTGTTTATAATGGCAAGAA
ATATCAAGGGACCGAGGACGGTACCCTGCGGGAGGCCACAGGTGGTGACG
GACCAGTCTGAGCGAACTCCTTTGTAGAGAACTCTTTGTTTCCGGTCAGT
TAGGAAACTGCATATCCACTGCGTGAGTGAGGGTCGAAGGCCCATGTTGA
TCAGACAGGTAACCGCTAGGAGGTGATCGACGCGGTCGAACGCTTTAGAG
AAATCTGTTGTAACGAGACTTGTAATTGTTCCCCTCTGGTCTGCGGTTTT
TGCAAGTTGATTGATAATATCAACTAAACAGTGAGTTGTTGACCGGCCAG
CCAGGCAGCCAAATTGGGTAGGGTCAATCACACTCAATGTTGCTCTTGAT
GTCTGAGTAGAGTCGGGTCGCCACAAATCTCTCTATGCATCCTTTTCAGT
TAGTCAGCTGTCTCCTCTTCTATGCAATATTGAGACCTCTCGCATACTAT
AAGTATTCAATGCTATACTTTCCTTAAAAGTTTATAGCTTTCTGTCATCA
AGGATAATGGTAGAAAATCAAATGTGAAAATTCAGGGAAGTAACAGTTGC
ATAATTACCATAATCATGCAAATCAAAATTCTGCCATGGGGCCATACCAT
AGTATGGTGGTTAGTGCTAAAGAATAGTTTTGACAAAAAATTCTGATTCT
CTTCACTAAATGGCTATATGAATTTCTTCTTGCTGTGTTTCTTTCTGTCT
TCTTGCACTTGCAAGGTACAAGAGAGAACATTGTTACAAATTGATTCTAA
AGGTAAGTACACATTTAGTACACATAAAGGAGGTTCTGACAGTATCTTAG
AAAAGTTGAAAACCAGAAGCAGAACTTTTAGTAGCCCAATGACTTGAGTG
TTTGATGAGGGCCTGTTTCATCAACAAATAACACATTGAAATGCAATACA
GTGCTGTCAATGTGCATGTACTTGAAGTTGGGTATAGTGCGTACACTGTG
TATCACTATTGTATGGGCTGATGACACATATATGCAAAATAAGGCCTTGG
GTCAATTTAAGTGACTTGTAACACTATGGTGGTTAATGACAGCAATAACA
GGTCAGCCCGTTGTTGTGGGGTACTTATTGGGTACTTGTTCTTGTTGGGT
ACTTGTTCTTGTTGGGTACTTGTTCTTGTTGGGTACTTGTTCTTGTTGAC
AGTCCATACAGTCACAGTGCATTTAAGCTAGGAGGTTATGCAGACTTAAG
TATGTGCTCAAAACAAAAACTATACATTTGTAATTCATCTGTAATTTTAG
AATGTTACAAGCTTTGAATTTGATCTTACAGCCTCTCTGTTTCTACTGAT
TTTCAGAAAAGTTAGGTGCTGGAGGTATTGTTGGCATCGTCATCGCGGTT
ATTGTGGGCGCTGCTTTAATCATTGGTGTCCTGTATTATTGCCTAGTGTA
TCGACGCCAGCCAAGCACGACCAATGGAGGTAGGACAGTATTTGCCACAC
TTTTGAAGCATATACCTTTGTTTTGTGGAATGGGCTTCCCAATGACTTCG
GCAGGCCAGATACAAATACCAGTTTTTGTCACATCATGGACCCGTTGGGG
TCGAGATTTAAATTGTGCATCTTTAGAATACTTTTCAGAGATCTGCCTTA
GACCTACCAAAAATGGATGTTGAATATTGTTGCTTCATTTACTCATATAT
GTACCTTTCTTCACCACATCCAGATATACCGCTGCAAACTGTTACGACAG
TATCAAATGGGCATGTGTATGGACAAGTTCCAGGAGGTCAGACCACTGCT
GCAGGAGGTCAGCCCGCTGCTGCAGGAGGTCAGCCCGCTGCTGCAGGTCA
GCCCGCTGCTGCAGGTCAGCCCGCTGCTGCAGGAGGTCAGTCCGCTGCTG
CAGGAGGTCA Coding sequence (CDS) from alignment at Sc0000050:1661207..1666616+ >BlTCONS00062915 ID=BlTCONS00062915|Name=BlTCONS00062915|organism=Branchiostoma lanceolatum|type=CDS|length=765bp|location=Sequence derived from alignment at Sc0000050:1661207..1666616+ (Branchiostoma lanceolatum)
ATGGAGTGGCGACCTCCAAGGTCCTCTGTACAGAATACAAGATTGATACA
TCTACTGGACCAATTCGAGGGCCGCCTCAACATGACAAGGAGAGGAGAAG
ACCTGGCCGCTGAGATTAGAAATTTACGACCAGAAGATGCTGGCATCTAC
CAATTTAGTCAATCTCTCCAAAAAGGAGAAGAGATGGACTTGAAGGTCAT
TGGTATACATGTGACTGGTCCACAAAATCCAGTCTTAGAAGGACAGACGG
CGAACCTGACCTGCTCTGTAGATGATCCCAACCCCGGCAACTTCACCTGG
ATCCATGAAGAGACTGGAGAGGCTCTCAATGGGTCCCTACAGGGAGACCT
GTACACTGCTGTGGTTCATGTTGGACCAAACAGTGCAGGGAACTATACTT
GCAGAGTTACAGGTGACAGTGGGGAAGGTCACAAGAGTATATCTCTTCTG
GTGAAAGAAAAGTTAGGTGCTGGAGGTATTGTTGGCATCGTCATCGCGGT
TATTGTGGGCGCTGCTTTAATCATTGGTGTCCTGTATTATTGCCTAGTGT
ATCGACGCCAGCCAAGCACGACCAATGGAGATATACCGCTGCAAACTGTT
ACGACAGTATCAAATGGGCATGTGTATGGACAAGTTCCAGGAGGTCAGAC
CACTGCTGCAGGAGGTCAGCCCGCTGCTGCAGGAGGTCAGCCCGCTGCTG
CAGGTCAGCCCGCTGCTGCAGGTCAGCCCGCTGCTGCAGGAGGTCAGTCC
GCTGCTGCAGGAGGT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00062915-exon-Sc0000050-1564993656:1661207..1662390 | BlTCONS00062915-exon-Sc0000050-1564993656:1661207..1662390 | Branchiostoma lanceolatum | exon |
| BlTCONS00062915-exon-Sc0000050-1564993656:1662678..1662860 | BlTCONS00062915-exon-Sc0000050-1564993656:1662678..1662860 | Branchiostoma lanceolatum | exon |
| BlTCONS00062915-exon-Sc0000050-1564993656:1663150..1663404 | BlTCONS00062915-exon-Sc0000050-1564993656:1663150..1663404 | Branchiostoma lanceolatum | exon |
| BlTCONS00062915-exon-Sc0000050-1564993656:1666063..1666185 | BlTCONS00062915-exon-Sc0000050-1564993656:1666063..1666185 | Branchiostoma lanceolatum | exon |
| BlTCONS00062915-exon-Sc0000050-1564993656:1666430..1666616 | BlTCONS00062915-exon-Sc0000050-1564993656:1666430..1666616 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000050 | genome | Sc0000050:1661207..1666616 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030881 |
|
