BlTCONS00062873 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00062873
Unique NameBlTCONS00062873
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000050:1453444..1455706+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00062873 ID=BlTCONS00062873|Name=BlTCONS00062873|organism=Branchiostoma lanceolatum|type=mRNA|length=2263bp|location=Sequence derived from alignment at Sc0000050:1453444..1455706+ (Branchiostoma lanceolatum)
GGGTATTCATGTGCTACGCAGAACTTGTTTCGTGTGGCTCTCATCCAGGT GAAAATGTCCCAAGGCTTCTGTTGTAGTCTTATGTTAGTGTCGGCTGATA AGAGAGCGGCTCCTCAGTGGGGGTGCGCCCGAGGAAAAACTACCTGTCAG CCGCAGACAGATGCAACCAGTTGTAAACCGTTCTGTCCAGCTGGCATGAG GCCAAAAGGCACGGGTTCGAATCCCAATTTCGTCATTTTGGAGCAACACT TCAATGTTGTTCATAATTCTGTACGAGTCACGTCGTGTGTTTTATTTACA AACAGTGTAGAAGTGAGATAGGAGTGTTTCGTGATTATTTACGTACTGCC TCCCTGAACAGCAGGTGGAAGGGACCGCAGGCTATGTTAGCCCACGGTTG CTGGTTCGAATCCCACTCGGTCATTGTTCGGATTTACGAACCAAGGTCTT ATTTGGACCGTGGCCAAACGCGGGTCTGGGCAGGGCCATGTTACCTCAGC GTTCGGGACGGGGTATTTCTGGAGTCTTACGCCGAAGTCTTCTGAGGAAC ACGACAGGTAAGTCGTTATCACCTGCCGATCGCAGGTCGCGAAAACACCA GGTCGGGCGTGTTTGCGCGGGGACGGCCGCTGATTGGCTACTCGGCGGTA GGACGTCCTCATTAGCGGGTTTTGTGTGCCATGTCTGGGCTGTGGTGATT GACAGATGGTGGTTACTTAATGCAAAAGGGGCGGGGCTAACTTTTGTGAG GGCGCGCAGTACAGTTTGGTGACAGTTCCGAGTTATTTTACGCAGTCAGC CGTGAGGTCCTCCCGAAGTGCGCACACGTTTTTCCCGAGCCTTGCCGCGC GCAGTCAATGATCCACCGCGGGACGCGAACAGCACTCACGCCGACGACTC TGTAGCTCCGTTGCGGGGAGACCTTCCCAGGCCCTTTCCTATTCCGTCCA GTACACACGCGCGAGAGACCAACTCTCCCGGACTTTACAAGCATGAATAT GCAGAAGGACACGACGTTTACCAAGATTTTTGTTGGGGGGTTGCCCTACC ACACCACGGACGACTCGTTACGGAGTTTCTTCCAGACTTTCGGGGAGATC GAAGAGGCCGTGGTGATCACCGACAGGCAGACGGGCAAGTCCAGGGGATA TGGCTTCGTAAGTACAGTTTCTGTGTGTGTATTTCCCTCCTTTCTGTGTC CGTGTTTTTCGCGACACGGTTTGTCCCACTCCGGTCTACACATGCTTTAC GCACCAATCGCTTTATTTGAACAGGTTCTTTCCGCTCTGTAACGCGCCTG TTTCGCTTCCCTGCCGCCCCTTTACCCTGTAGGTAACTATGGCGACTAGG GAGGCCGCAGAAAAGGCTTGCAAGGACCCAAATCCCATCATAGACGGCAG AAAAGCCAACGTCAACCTCGCATACATCGGAGCGAAGCCTAGGAACACGC AGCCAGGTAAGACCGACCCGTCCCGGCGGGCCGCCCGTGTTCGTGCCCCC GTGCCTTCGTTGTCAAGCACGGCGGTCGCCGTTTGCCTTGTCTCCAACCG ACCAAAGCGGGGGGCATTCGCTCCCTATTCGTCTCAACTTGGCGCTCAGT GAATAGGCCTGCAACACAAGAGAAAAAGATACTGTGTAATATATCACCCG CCGAATAAAAGCCATATGCACAGAGGATACCCCTGCAACAACCACGCTTT TCAATTCGACGGGTCATTTGCATAGGTGTCACGTATCAGCCTACCCATAC AATAGACCATAACTATGCAGCTCATATCATATAATACCTTCACTCATACA TGTTCCCTTGTTTTTGTAGGCTTTGGTTTTGGCATCAGGGCAGTGCCCCC CGGATATCTTCCAAGCCAGTACGGGTAAGATCTCTAGTTTGTTTATTCTA GCTACCGTGTGCACAATTCGCACTTATAAAGACCAATTCGTACCTCTGCC CTAAATAGTATTAAATTTTGATTGAGTGGCGAAACTGTATTGTCTTTAGC TGTGACGTCACGTGGAGGGGATTACGTACAGTGAAGAGGTTTTTTCTTTG GTGCTTCTTTTGTTTACAAGTGTGTTTCAGACAACAACAACAACAAAAAC AGGAGATTGTTCCTTCTGAACTTCTTTTTTATTTTTATTTTTGTTCTCGC TCCTATCGAGTCGCCATATTTGACGTGCTTATTGTCTTTATTCTATGTCA GTGATGTAGACTGTGGCAGAGGAAGATGACAAGGAAAGAGAGAAATAAAT AAGTGAACTCATG

Coding sequence (CDS) from alignment at Sc0000050:1453444..1455706+

>BlTCONS00062873 ID=BlTCONS00062873|Name=BlTCONS00062873|organism=Branchiostoma lanceolatum|type=CDS|length=300bp|location=Sequence derived from alignment at Sc0000050:1453444..1455706+ (Branchiostoma lanceolatum)
ATGAATATGCAGAAGGACACGACGTTTACCAAGATTTTTGTTGGGGGGTT
GCCCTACCACACCACGGACGACTCGTTACGGAGTTTCTTCCAGACTTTCG
GGGAGATCGAAGAGGCCGTGGTGATCACCGACAGGCAGACGGGCAAGTCC
AGGGGATATGGCTTCGTAAGTACAGTTTCTGTGTGTGTATTTCCCTCCTT
TCTGTGTCCGTGTTTTTCGCGACACGGTTTGTCCCACTCCGGTCTACACA
TGCTTTACGCACCAATCGCTTTATTTGAACAGGTTCTTTCCGCTCTGTAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00062873-exon-Sc0000050-1564993656:1453444..1454899BlTCONS00062873-exon-Sc0000050-1564993656:1453444..1454899Branchiostoma lanceolatumexon
BlTCONS00062873-exon-Sc0000050-1564993656:1455263..1455317BlTCONS00062873-exon-Sc0000050-1564993656:1455263..1455317Branchiostoma lanceolatumexon
BlTCONS00062873-exon-Sc0000050-1564993656:1455645..1455706BlTCONS00062873-exon-Sc0000050-1564993656:1455645..1455706Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00062873BlTCONS00062873-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000050genomeSc0000050:1453444..1455706 +
Properties
Property NameValue
GeneIDBlCUFF030859