BlTCONS00062852 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00062852
Unique NameBlTCONS00062852
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000050:1334904..1336734+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00062852 ID=BlTCONS00062852|Name=BlTCONS00062852|organism=Branchiostoma lanceolatum|type=mRNA|length=1831bp|location=Sequence derived from alignment at Sc0000050:1334904..1336734+ (Branchiostoma lanceolatum)
AAGTATCATCAGTTATGTCAAACATAGCTGATGCAAAGTTTGGTATGCCA CAGTCACAGCAAATCCACGAGTATGATTGGTGTGTTTCTAATGCAGTATA CACCTGAGAACATAGCTCAATGCAGTCTTTATGATACCATTTATCGCAGC CGTCACAACAAATTGCAGTATGGGTATGTTGTACAGCTTTGTTACAGCTC CCGCAGGGAAACTTTGGCGGTCTAGGCCCAGGATTTATCTCGACATCTCC ACTTAGAAGCAAAATCATAATCAATGATAACTTTGTACTATCATTGTGCA TCATTATTTTCTTGTGACCGAAATGAGTCCCATTCACCCCACTGTGCTTA ATCATAAAGGCAAACGTAGCCCAGTCAGAGGTGCAGTCAGTTCTGAAGTC GCATGTGACATGTACGTCCTTTATCTCGTGTTTGTCTATTGGCTGTGCTC CTGGCTGAGCCTTGCCAAGCATCAGACAAAGGGCCAGGAAAATGCAAGTG TAATGGAGTTCCATTTTGTTATTGAAAAATTATCACCCACACAGATGTAT GCCACACAGGTTTCTACCACACTAGCTGTACCAACACAACAGGTTTACAC CACACAGGTTTACACCACACAGGTTGTACCAACACAACAGGTTTACACCA CACTGATTTCCGCCACACTGGCTGTACCAACACAACAGGTTTACACTACA CAGGTTCCCGCCACACTGGCTGTACCACCACCTGTTTACTTTACACAGGT ATCCGCCACACTGGCTGTACCACCACCTGTTTACTTTACACAGGTTACCG CCTCACTGCTACCCTTTCTACTTTACTTGGGTCAGCGTTTTTAGAAATAC TTTAACATTACATATGCATTTCAAGTGGTGTCCTTATATAATGAATATAC TTTCATTTGGAACATTTGACTGTTGGTTTCATTTTCATATGAAATCTCAA GATAAATGGTGGGTTCAAATATACAAGAATTGTATTAAAGACATTGTTTA TACTATAGTATTTTATTTGATAGGTACATTCCTTCTTTTTATGAATCCAC CATTCTTATGGATAGTCTCCTAGATACATTTTCTAAAATAGACTCAGCGT GCATCGGAAGTGTACTCACCATTACGTATGCTTGAATCTTTAACAGACGT TTGAAGTTAAGTATGTTTTAATTAGACGCATTCAAACAGAAACTAAGGCG ACAAGCGACATCCTCTTTAGGCAGTTAAGGAAGTATGTTGTTGTTAATGA CAGAAAACCTAATTGTACATCTTAACATTAATGAAATAAAAGTCTCCTAA TTTCGAAAAAGATTTTTCCAGTATTCAAAATTATCCGCGTCACTTACTGC TAGTTGCTAATGTATGGAAGAAAAGAGAGGTTGTGCAAATGACGAAGGTT GGTGGGGTTGGAGACTGTGACTTTTTGTGTTTCCAAGGCAACCGTTGCTA TGACATCAGCGTTGGGTGGATCCACCAGACGGAGCACGTGGTATAGAACG CCATTCTGCTGGTCCAGGGTGATGACGTCACCGCCGTAGTAAGATTGGTA CCGGTCTGAAAGGGCAAAAAAAGGACACTTAAATGATTTTGGCAACACCT CAGCGGCGGAGCCTACATTGCTAATACGAACACATTGGCCAGTTTGCTGC TAATCTAATAGGGGACAGATTTTGAGATAGCATTGACTTTGACCATGACT TACGGGAAGAGATCTTCCTCCATGGCTGTACTACTCTACTCTACTCTACT CTACTCTACTCTACTCTACTCTACCCTACTCTACTCTACTCTACTCTACT CTACTCTACTCTACTCTACTCTACTCTACTC

Coding sequence (CDS) from alignment at Sc0000050:1334904..1336734+

>BlTCONS00062852 ID=BlTCONS00062852|Name=BlTCONS00062852|organism=Branchiostoma lanceolatum|type=CDS|length=522bp|location=Sequence derived from alignment at Sc0000050:1334904..1336734+ (Branchiostoma lanceolatum)
ATGAGTCCCATTCACCCCACTGTGCTTAATCATAAAGGCAAACGTAGCCC
AGTCAGAGGTGCAGTCAGTTCTGAAGTCGCATGTGACATGTACGTCCTTT
ATCTCGTGTTTGTCTATTGGCTGTGCTCCTGGCTGAGCCTTGCCAAGCAT
CAGACAAAGGGCCAGGAAAATGCAAGTGTAATGGAGTTCCATTTTGTTAT
TGAAAAATTATCACCCACACAGATGTATGCCACACAGGTTTCTACCACAC
TAGCTGTACCAACACAACAGGTTTACACCACACAGGTTTACACCACACAG
GTTGTACCAACACAACAGGTTTACACCACACTGATTTCCGCCACACTGGC
TGTACCAACACAACAGGTTTACACTACACAGGTTCCCGCCACACTGGCTG
TACCACCACCTGTTTACTTTACACAGGTATCCGCCACACTGGCTGTACCA
CCACCTGTTTACTTTACACAGGTTACCGCCTCACTGCTACCCTTTCTACT
TTACTTGGGTCAGCGTTTTTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00062852-exon-Sc0000050-1564993656:1334904..1336734BlTCONS00062852-exon-Sc0000050-1564993656:1334904..1336734Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00062852BlTCONS00062852-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000050genomeSc0000050:1334904..1336734 +
Properties
Property NameValue
GeneIDBlCUFF030845