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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000050:1167534..1175435+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00062813 ID=BlTCONS00062813|Name=BlTCONS00062813|organism=Branchiostoma lanceolatum|type=mRNA|length=7902bp|location=Sequence derived from alignment at Sc0000050:1167534..1175435+ (Branchiostoma lanceolatum)
CTTTTCACTGGGAAGTATGGGAAATATCCAACATGGCTGCGCCCATCGTA
AAATTACGTAAATCGAAAGTTTTTATCAAGAAACTGCTCTTTTCATATCA
GTTGGGCCTCTAACCTAGCACGTTTCGTTAGTATTTGATCAAAGACTATA
CTAAAGACGTCTAGGACAAAAGCTAGGTCGAAATTCGTTGGCGATTTGGA
GATATTTTGGAGTTTAGATGGCGTCAGGGGACGCTCACGTCACACCCCGG
GCCGCTCGACTGAAGTTGCTCCGACATGTGAAGGGGGAGCATCTGATGGC
GGGGGTGAGCGGAGGGGTCATGTCAACCCTCGTGCTGCATCCACTGGACC
TCATCAAGCTCAGATTCGCAGGTAAACACGACGTGATGAGCTGACTGTTT
GGGTTGAAGTGAACGATTGTCGTCTGCTGGGGGGAGGGGCAGCTGTATGC
CTAGCTAAACACCGTACGGGTCTCTTATAAATAAACTCGACCAAGTAAAA
ACCTGAGACTAGAATCGAAGTCTTGACTATGTCGTCTAGAAGCGTGCCGC
ATTTAATGTCATACTGTTGTTTTTGAGAGCCTTAAGAAAGTCACAAACAC
CTTGGTCCAAATGTTAACAACAACATAAATAATTTTGCCAGGATATATAG
TTTCATGGAAAGTCATCCAGTCAAGTACAACCACAGAGCTCACCTAAATG
TGACAAATTACATTGTATGTCAGCTGAAGAAAAGCTGTATAAGGAGCAGT
TTGAACTGGAGAGAAACTCTTACCTAACCATAGACTCTACTTCGATATCT
TTAGGATTTCTCTTGTGGGACAAGCGGTAACGCAACCCTGCAGCTTGTAT
AACAGTGGGGGTTCAAGCGCCTCCAACTGACCAGTCTAACTGGTCGCGAC
CTTTTAGCCTAGTGGTTAAGGTATGCGTGCCTGTGATCTGGGCTGCCGGT
TTCGGTGTGGGTTCGAATCTCGGTTGGGATCACTTGTTTCTACTCGCTCC
TTTGGGTTGTTTCACTTGGTAACCAGGATCAAATTCAGTGAATCCTAGCT
CAGACATGTTGTAAAAGATTGCATACGTCATTTCGGATGGTGCACCGGTG
AAGTAAAGCTGGAGGACCAGTGTATGAGAAGCTCCTTTGATGGCCATACA
ACAAGCCTTAATGTCTCAACCGCAAACCTCTGCACATAAAAGAACCCAAC
ACACTTATCGAGAAGAGTAGCCAGCTTACCATTGGCTGTGTGCCACAATG
TATTGTACTGTTGCAATTCAAATGAAGATGTATTATTCCATCCAACGTCT
CTTCTTGTTTTGTGTCTCCCACTCCCAGTGAGCGATGGTCTGGCATACCA
GGGGATTCTGGACTGTGTGAATATTAACCTTCTCCCTGCTGCCTAACCCT
GTAACCAATTACAAATATGGAGCCAAATAGCTGCTTTCACAGGGAGAAGG
TTAAAAGAATCATCTATGCATTATTGCTACTTTTCCTTTGCCCTGTATGG
TTCAGCTTTGAAGAAAATGACAACTTCTGTTCCTTCTGTTATGTGTCTCC
CAGTGAGTGATGGTTTGGCGAGCAGACCGACCTACCAGGGGATCCTGGAC
TGTGTACTGGCCATCTACAGGGCACGGGGATTCCCAGGGCTGTACGCAGG
GGTAACACCCAACATCATGGGAGCTGGAGCTTCATGGGGACTCTACTTCT
TATTGTAAGTTGTGACTTCTGAGACATCTGAAGAACATGTATGGTAGGGC
CTGCATGCTCTTTTCTATAAGTCGTAGGCAGGCCTTTTTAATTTCATCAT
AATATCTGTCATTGAACATCCTTTCAATGACAGATATTGAATAGCATGGG
AATTGATACTCTCCTAGCAGAGGTAAGATCCGGAGTATTTTCGACGTATT
TTCACGGGATTTTGTATGTCTTTCTACTCTCCCGTTTTTTGTTGGGTCTG
AAATAAAGTAGAAAGACGCATTGAATACTGCGAAAATATGTCGAAAATAC
CCCGGATCTTACCTCTGCAAGGAGAGTAGGGAATTGATATAACATTCACC
CCACAAAAAGAGATTACCATTCTCTGTACTGTATACAGTTTTCAGGTCCT
CATGCATATTGTTTTTTTTTAAAAAGCAATATAAGTTGAGAAGTTTCAGA
AAGACTCTTAGATGTACAACTGCAGAAAATACAGGAGTACATGACCATGT
GTGTAGGAACCTACACCATGTACTTCTTTATTGTGCTGTGAGCATAATCA
TGGTTTCAACTTTGTAACTCCTAGTTTCTCATGTTTCCCATTTAGCTACA
ACGCCACCAAGCAGCACTGGCTGGAATGGCAGGGCATGCAGCCAAACGGT
AACCTGGGACCAGGCAAGCACATGGTGGCAGCGGCTAACGCAGGTGAGAG
TGCTGTCTTTGTTAGGTATTTTTTTAACACACTGAAAAGGAGGTACTAGC
ACATAATATGACATTTGTACCTTCCCAGTATCATTAGGACTGGTCTGTGT
CTGTCTATCACACAGGCCTGTAGTCTAGAGGGATGTACATGTAGCATGCA
TTAAGAAATATCTAAGCATTACAAACTCTCGACACAGAACAGCAATCACA
AAGCTTCGGATAAGTTCACACAAACTGAACATCGAAAAGGGCAGGCACAA
CCACATTCCTCTGCAAGAAAGAATTTGTCAACATTGTAATTTAGATAGAA
TTGAGGACGAAAGTCATTTTGTTGTGGAATGTACATTATACAACGATGAG
AGAAATATCCTTTATAATTATATACAAGATAAGTTCCCTAGTTTTAGATA
TATAAACAGCACTGAAAAATTCCTATTTATTATGAAACTGAACAAACCAT
GTATTACGAGCTCCATATCTACATACATCTACAATTGCCTTAAGAAGTCG
AACCTGTAAATAGTAGACAAGTATAGATTAGTCATATTAGACATGGTAAG
ATATCACATTCTATTACGTTATATCATCACCACTGTATGTATCCCTTTGC
TTATCACCATGACCTGTACTTAGCTTGTTTAAGCATAAATGTACAATAAA
GGTATTTCATTCATTCATTCATTAAGTGACATTTGGTGACCAGAAAACAA
AATTTGTTTCTCTTAAAAAGCCATTGCCCTCCATTGAAATTTGAAGTGAC
ATATGGCTTCTCTAATGGCTGGTATTGGTAATGCAGTGAGACTGGCCACA
CCTTCATGTACCAGGCTCCCCTAGAAATGGACACTTGAGCCTTATATCCC
CTCTGAATAAAGTATGCTAGCCTGAATTCAATCAAGCCTCCTGTGACCAC
CCGCCGCCCTGTAACCGCGGGGAGGGGAGAGAACCCCCCCCCGGACAGCT
GGAGTTTGCGTTATACAGACTAAAAGTATGCAACCTTAACCAACAGCATA
CAGATCAAAGTAAATGTAAGCAATGAACCTCAGACCTGACCTGTGGGTCT
ATAGTAATGAGACCAAATATCTTATATGTCCCCAGGTGTAATATATTGGT
TGAGTCTTCCCAAAATAATTTCATCAGGTAGGTAGAACAGCGGGTAAGGA
TTTACTGTGAAAAAAGAAAATGCCAATATCCATTGGTTGAGTCTGTGTGG
CCAAAGTGATCTCTTACACTTGAAACTGTGTTGTCTTTAGGTGTGATAAC
CCTGGCCATCACTAACCCCATCTGGGTGGTGAAGACGCGGCTGTGTCTGC
AGTACGAGAATGAGATGAGGAACGTAGCCGTCAGCAGACGCTACAAGGGC
ATGTCGGACGCACTGGTCAAGATATGGAGACATGAGGGCATGAGGGGGAT
GTACAAGGTATGTGGAAGAAACTAAGAAAGAAAAGAAAAACTTACAAAAG
GAAAAAGGACTGCGTAAAATGATGTATAAATGGATTGGGAGCAAGGAGAA
TAAACATGGCAGCCAGCAGACGCTACGGAGGCATGTCGGACGCTCTGGTC
AAAATATGGAGACACGAGGGCATGAGGGGGATGTACAAGGTACGGGAAAG
AAAGGAAAGAAAAAAGTACAAAAGAAAAAGGGAAATTAGAATAAAGAAAC
TGATGAATAAATGGATTGGGACAGACAAGCAGAAACATGGCTGTCAGCAA
ATGGCACAGGGGCATGTCTCATGCGCTGGTCAAGATATGAGGAGGATGAA
CAAGGTTCGGAAGAACGAACTGAAAATAAACATAGAAAAGAGAAAGAAAC
AACAGTCAAGCACTAAATAGATGACAGAAAGGGCCAAGTGGAAACATGAG
TGATTACATAAGACAGCCAAAATGTTGAGAAAAATAGAATGAAAAGAGGC
TGTGATTCATATTGAAAAACTTCATGTACAGTACTGGAACAGTAATTTCC
AAGAGATCCAGCCTTCTGATACAGACAACTTTTACTAATCCATGTAATGT
GTTGGACAAGTTTGTAAACATGTACCTGTATGAAATAAATGTGTGGAGTG
TGTGGATTGAATGTCGTTGATTAATTCGTCATGAATCATTCTCTCACCAG
GGTTTTGTGCCAGGGCTGCTTGGTGTATCCCATGGTGCACTGCAGTTCAT
GTCCTATGAAGAGTTGAAAACACAGTACAACCTGTACAGAGGGACACCCA
GGGATAAACATCTGGTGAGTTGTGGTCTTTTTAGTATTTGAGACTCTCCT
CTTGTCTTAGTACCAATGAAGCTTTTTTGCTGTTCTCTAAGATGAGTTAA
TAGCGACAGAATGATCAATAAGATGATAGCGGTCGCTACAACAGGAAGAG
GAACTAAATAATGATATGGAATGCAAGGATGTCCCTGAATATGGACCTTA
GGTATAATCTCAGGGCTATTCCTGCAATGGCACAGCAGACCTCCACAACA
CACATTTTCAGAGTGAACTGTGAGGTCTAGAAATATGTTGTGCTTACAAG
AGGCTGCAGTACCTTTGACAACTGTTAGGTGGTGCACTTACTAAAGCAAG
TTGATGTCACAGCCACTTGTTTGATTTGGCTACTTTGTTCCTTGACGAAA
ACAGCAATAATCAATGCAACAATTGTGTTAGCAATTCTACATTCCAATCT
TTGTTTCCAGAATCCTTTAGAATACCTGACAATGGCAGCGCTGTCAAAGT
TGTTCGCAGTTTCCACAACTTACCCGTACCAGGTCGTCAGGGCAAGATTA
CAGGTCAGACTATTTAGCATTGCTCACTATTATTATCTCCATGAAAAAAG
GCTTTTTCATGGAGTACTGTTTTGCTTGCGTTTGGTGTTTGTGTGTATGT
TTGTGTCACCGGTCGCTTAAAGTCACCATAACTGTAAAACCTGTACATGG
ATTGAAATGATTTTTGGTATGTGGGTGGGTGTTAGGTGGAGGAAGGTCAA
GGTCGATTTTGGGCCTCCTAGTATGTGTGACTGGAACTGCAATGGCGTAT
TTGATAAAATCTTAAATGTAGAAGAACTGAAGAGTGGATGGACAGATCGT
CATGTTCTTTGGTACACAGGTAGGTTAGACCAAGTTGTACACACTTAAGT
GCAAACTATGCAGATGAGACCGAATTTGCATAAGTAAGGAGGTAAATCGT
TTGCATGGGTGTCGTCGTATGCTTAAAGTCAGCATAACTGTAGAACGTGT
AGATGGATTGTAGTGATATTTGGTATGTGGGTATGCGCTGGGAGGAGAAT
GGTCAAGGTCGATTTTGGGCCCCCTGGTTTGTGTCCCTGGAACTGCAATG
GCCTATTTGTAAAAATGTTCTAAAGGGGTTTAACTGAAGAGAGGAACAAC
AGATTTTCATGTTATTTGGTACGCTGGTAGGTTGGATGGAGATGTACACA
CTGAAGTTCAAATCATGCGAAGTTATTGTGTTTGTGTGTGTGTGCGCGTG
TGTGTATGTTTGTGTCACCGTGTTTGTATGTATGTGTCACCGGAAGCTTA
AAATCAGCATAACTGAAGAACGTGTGGATGGATTGAAATGATATTTGGTA
TGTGGGTAGGTGCTGGGAGGAGAAAGGTCAAGGTCGATTTTGGGCCCCCT
GGTATGTGTCACTGGAACTGCAATGGCGTGTTTGTAAATATTTTCAAAGG
AGAATAACTGAAGAAAGGAGCGACAGATTTTCATGTTATTTACTTGGCAG
GTAGCTTAGAGAGGGTTGTATACAATGAAGTGCAAATTATGCAAATTGGA
CTTAATTTGCCTAAGTAATGGGGAAATCTATATTTGCAGTGTTGGCCATT
CCATTGCCATCTGTTACTTGTAGTAGCTATGGCCATCTGTTACTTGTAGT
AGCGAAAGTGGGTCCCCCCCCCCCAACATGTGTGGGTCATACCATTGAGC
GATATAGAATGGGGGGAACTGGTTTAATGAATGAAAGACCTTCATTGTGC
ATTCATGCCCCGAGGGGCTAGGTACAGGCCGTCTAACTTAACACATGAAA
CATACAAGGACATAAATACAACAATACAAGCTGTAAACATATAGAATAGA
CAAACGTGTTATCAAACTAAGCTAGTCCAATGGTGTCGACTTCTTCTCGC
TTCTTTGTACATGTGTAAATGTATGAACAGACAATATTTCTAATACAAAG
ATTATCCAGGCGTAATGAAAATATGAATTTGTCTGTTGCATTTAGATGTT
TGAAATATGGGAATTTTTCTTTGACAAGGTTAAAAAGTACACTTCTTTCG
CTATCGTATGATTTACAATCTAGGACGAAATGTTGCTCATCTTCTACTCG
ATTTAAATTACAATGTTGACAAAGTCTATGTTGTAGAGGCGTGCGGTTGT
GCCTTCCTGTTTCAACATGTAATCTGTGACAGCTAACCCGGAATTTAGCA
GTAGCCACTCTGTGTTTGATGTTGCTAATGGATAAATACTCTTCTTCTTT
ATACAATGACTTAAACAGTCGGTAGGTTCGGAGTTTGTTACTGTAAGATT
TATCCCTGTTATCGTTGGGGATTTCGGCTGAGAATGTTTGAGTATAGATG
TCTTTTAACCGTTGACTAATGGAGTTAATGATATGTGACAAATTTGTTCC
CAAGGATACTTGGCTCCAAACGAAGGCATAACCGCATTCCTCTAGCATGT
TACGGACACCGGACGCCCAGCATTTTTTGCCATTGGCTTCTAATCGAAGT
TGGCATAACAGGGCATCGGCTTGTAATAAAAAACAAAGTCTCATGGAGAT
TTTGGGTCCTAGGACTCTTGTTTTGTATCTGTTGTTATTTAGTTAGTACT
TTTGTATGCAGAATGGTTTGGAAAAGTAATGAATTGGTTTTTATGATCTT
CTACTATCGGTAACTGATTGGTTGAATTTTGGAAAGACTGAAAGACATGT
CAGAATATCCCTGAATGATTTCATTGTTGGTATTTCCAACATCATTTCTG
GTTGGTTAACAAAGTTTTTGGTACACGACTAATGGTTTTCACCTGGAAAA
TACAAAGACCTTTAACCATGTTAACCATTATTGATTTACCGATCTGATGA
AACTAGTCATGGAAGGTATCATTTTTTAATGTTTAGTAGCATAACAATGC
TAGCGGCCTATTGACCGTCTACAACACATTACGTTTGTTCAGTTACTTTT
GCCCATTAAGTTTGTTTTGATTATATGATTATTTTACTCCTATGTTACTG
CTTTGACCTCTGACCCGCTCAACATCATTTGGTTGCTTTTGTTTGATGAT
TTCAGTGCTATTGTTTGTCATATTGAGTTTGTTCTGTATTATTCCTAGGT
TTAGTTATTATTTTATGACCTTTATTTATTATCTGTATGCAAGGGCTCCC
TTGGAAATCAGCTGCTGAGTCAGCTGAAGGGACTACCCTAAAGATGATTA
AATAAAACAATGCACCCTTCCATATGTAGAAATAGGAAGTTAAACTATTT
ATGTTAAGTTTGTGACTATCTTTCCCATCTTTTCCTGTAGGACCAACACA
AC Coding sequence (CDS) from alignment at Sc0000050:1167534..1175435+ >BlTCONS00062813 ID=BlTCONS00062813|Name=BlTCONS00062813|organism=Branchiostoma lanceolatum|type=CDS|length=789bp|location=Sequence derived from alignment at Sc0000050:1167534..1175435+ (Branchiostoma lanceolatum)
ATGGCGTCAGGGGACGCTCACGTCACACCCCGGGCCGCTCGACTGAAGTT
GCTCCGACATGTGAAGGGGGAGCATCTGATGGCGGGGGTGAGCGGAGGGG
TCATGTCAACCCTCGTGCTGCATCCACTGGACCTCATCAAGCTCAGATTC
GCAGTGAGTGATGGTTTGGCGAGCAGACCGACCTACCAGGGGATCCTGGA
CTGTGTACTGGCCATCTACAGGGCACGGGGATTCCCAGGGCTGTACGCAG
GGGTAACACCCAACATCATGGGAGCTGGAGCTTCATGGGGACTCTACTTC
TTATTCTACAACGCCACCAAGCAGCACTGGCTGGAATGGCAGGGCATGCA
GCCAAACGGTAACCTGGGACCAGGCAAGCACATGGTGGCAGCGGCTAACG
CAGGTGTGATAACCCTGGCCATCACTAACCCCATCTGGGTGGTGAAGACG
CGGCTGTGTCTGCAGTACGAGAATGAGATGAGGAACGTAGCCGTCAGCAG
ACGCTACAAGGGCATGTCGGACGCACTGGTCAAGATATGGAGACACGAGG
GCATGAGGGGGATGTACAAGGGTTTTGTGCCAGGGCTGCTTGGTGTATCC
CATGGTGCACTGCAGTTCATGTCCTATGAAGAGTTGAAAACACAGTACAA
CCTGTACAGAGGGACACCCAGGGATAAACATCTGAATCCTTTAGAATACC
TGACAATGGCAGCGCTGTCAAAGTTGTTCGCAGTTTCCACAACTTACCCG
TACCAGGTCGTCAGGGCAAGATTACAGGGACCAACACAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00062813-exon-Sc0000050-1564993656:1167534..1167904 | BlTCONS00062813-exon-Sc0000050-1564993656:1167534..1167904 | Branchiostoma lanceolatum | exon |
| BlTCONS00062813-exon-Sc0000050-1564993656:1169087..1169237 | BlTCONS00062813-exon-Sc0000050-1564993656:1169087..1169237 | Branchiostoma lanceolatum | exon |
| BlTCONS00062813-exon-Sc0000050-1564993656:1169829..1169926 | BlTCONS00062813-exon-Sc0000050-1564993656:1169829..1169926 | Branchiostoma lanceolatum | exon |
| BlTCONS00062813-exon-Sc0000050-1564993656:1171174..1171314 | BlTCONS00062813-exon-Sc0000050-1564993656:1171174..1171314 | Branchiostoma lanceolatum | exon |
| BlTCONS00062813-exon-Sc0000050-1564993656:1171497..1171522 | BlTCONS00062813-exon-Sc0000050-1564993656:1171497..1171522 | Branchiostoma lanceolatum | exon |
| BlTCONS00062813-exon-Sc0000050-1564993656:1172034..1172147 | BlTCONS00062813-exon-Sc0000050-1564993656:1172034..1172147 | Branchiostoma lanceolatum | exon |
| BlTCONS00062813-exon-Sc0000050-1564993656:1172594..1172687 | BlTCONS00062813-exon-Sc0000050-1564993656:1172594..1172687 | Branchiostoma lanceolatum | exon |
| BlTCONS00062813-exon-Sc0000050-1564993656:1175424..1175435 | BlTCONS00062813-exon-Sc0000050-1564993656:1175424..1175435 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000050 | genome | Sc0000050:1167534..1175435 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030833 |
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