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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000050:1123244..1127777+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00062807 ID=BlTCONS00062807|Name=BlTCONS00062807|organism=Branchiostoma lanceolatum|type=mRNA|length=4534bp|location=Sequence derived from alignment at Sc0000050:1123244..1127777+ (Branchiostoma lanceolatum)
CTTTGACCCTCAAAACGGGGTCAACGTCCTGGAGGATTTCTTCAGATAGG
ATCTTTGCAGTTGTCAAAGTCCAACATCCCAAAAGGTACTTGGATTGCTC
GCTGAAGCATACATACGGCAGCGATGGGAAAGAAGTGAGTGATCTAGGAT
ATCTAGACGTCGTGATCAGATAAAAAACAGAAAGATTTCCCTTCTAACGT
TAGCTGTAACGTTATATCATCTGGAAAGAAGGACACACAAAAATATGTCG
TCTGCAAAAAGGACCAAAACGAACCCAGACCTGCAGAAAGAGCGGGACGG
AGCGAGCTTCAACCCTTTCAGCCTGACCTGTCTGCTGCATGGTGGAGAAG
AGAACGTGGAGAGGAAAAGAGAGCTCGGTAAGCCTTTCTTTTGTCCCGTA
TTTGGTGTATGTAATGTTAATGTTGTGGGGAGGGGGGCGTAACTGAAGTC
TAGCCACTCGTTACATAAATGTAAGGAGGTTATATCTCCTTGCATAATGT
CACCATTGGTAGAAAGTGATGTTGTAGAAAAAATAGCTAGGGTTTCCCGG
TATAGATGATGAGACACTGACATACTAGTAAATAGATCCTTTTGCCCTTA
GATCTGTTCTAGTACAGGCCTGGTATGTATTCAAAGTGATTTTTTTAATG
ATTCAGGGGAAAGAATTAGGACATGTACTTTACTGGCAAGGTAAACAAAT
CATGTAACACAGTTACATGTATTTAGATAAACTTTACGTACTTACATAGG
ACTTTACCCCCATTACGTGCACAGCCCCACGTTTCTATTGTAAGGATCAT
ATCTATTGTAAGTGATTCTTGAATTATCACAGATGTAACAATAACTACAT
TTGGGAGCCCTCATTGTTACAACAATACATTTTCGTCAATGTCATGTCAT
GAAGTTCAGATTATTTTGACAGACGGGGTGAAATTTTTCATGTGCCAACA
AGCAAATCTCCATCCCGGGACGAAGGGATGAGTCCTGGAGACAGCCTGAT
CTAACAGATTTTATTCCCCGTTCCAGAGAGGCTGGCCTTAGATGACCCTG
AGCTTCAACATGAGCACCTTAGCTTCCTATCCAGGGATGAGCGTTACACC
TTAGGTTTGAAGAAAACCATCCGCTTCCTCAACAAATGTTGGGAGTTGGA
CATCACTGGCATTCAAGATGTTAATACCTATAGGAGGTAGGTACAACCAT
GAAAGATTTTATATTCAGTACAAAAATGTGCTATTTTCTATATCCAGGGC
TGGATGCATGTGCACTGGTGCACCTAGATATTTGTCATTACATTTTTTAA
AGCATTATTGCACACTAGTATACAATATATTCCAGACATTTAAAAAAAAT
AAGACCTTTGTTACATTACCTGTTCAAGAAATTTCCCTGGTACAATGGAC
CTGTATATACTGCACGTAGCATCTGTCTTCTCTGTCATGACCATTGGAAG
CTCTTGAGTAGGCTTAATATTGGTTGAGATCACTTTCTTTTACTTTGATT
CTTTCTGTATACACATGTCCCTATGGTGTCAGCGGTAACATAACCCCGCT
GCTTCGCCATCTGGATCATATTCTGTAGAAAAAAATGCAAGCCATAGCAA
AGCCGCAGTGCACTATCACTAGCTACTTGAAAAAGCATCTGATGCTTCAA
CTCAATTCAGAATGAAGTTGCTTTCCCTTTTTACCTTCTTCTGTATAAAC
AGGGCGGTGTTCCTAGGGATGCTGGAGCCGTTGAGTGTTCACTACGGCAT
GTTCCTGCCTACCTTACTGAGCCAGGCCACAGAGGCACAGCAGGAGAAAT
GGCTGTCCCAGGCCCTTAACTATGCCATTATAGGAACCTACGCACAGACG
GAGATGGGACACGGTAGGTGTGCTTTCATGTACCAAAAAAACATATATGG
CAAATAAAAAGTTGAAACAGATTCTTGGTTAAAAGCTAGCCTCCTTGTAA
CTAGAATTTTGCTCTATAAATATGGCTTTTTTTAATGACATATCAGTCCT
ACTCTACAAGCTCGGCAGCCTGCAAGAAATGGAGTGCAATTGAACTGAAA
AAAGGCACATTATATGCTAAAAACCCAAGTCATATGGCCAGAATGCCAAG
GAGGCTAGTCAGATAAAGGCTATCTTTCCTGTACTAGACTGTAGTCTGAT
ATCCATCAGTTTTACAAATCTGGATTGTTCACCATTGATAGCCTTCTATA
TCTTATAATGGATAAATAGCAGGTGATTTTGAATTGAGCAATCATTTAGA
AATTATCTTACTGCAACAAGACAACTAAGAGACGATGACTAAAAACTATG
GTATGACATTAAGATATCCATTCTTTTTCTTGAACAGGCACATTTCTACG
TGGTCTTGAGACAACGGCGACCTACGACCCAAAGACGGAGGAGTTTGTGT
TGCACAGCCCGACACTCAGCTCTGCCAAGTGGTGGCCGGGCGGGTGTAAG
TTTTATCTTCGTTTCACAGCAAAATCTCTGAGCAAATGTCAGATTCTTTT
AAATGCAGGACATGGGGGTGGTCAACTCAGCCAGTCTGTGTATATACTAG
TATTTGGGTAGCAGAATGTATGGCTATCCTCATCCACTGCCCAGAATCTT
GCAGGACAAGTTGTATTGTGTATATAAATGACGCCTATACAAGACTTATG
AATGATGTCATTGTGCCAACCTATATAATGTAGTTATTTTTTTGTAACAT
ATGAGCTTAGTTTTGGAAACCTACTAGTAAGAACTGAGAATAAGCCATGT
GAGAATGTTGTTTTCAATACTTGACTGTTGTTTGCAGTGGAAAAGTCAGC
TTATCATGCCTTTAAGTACTGGCCATGTGAAAATGTCTTTTTCATGACTT
GACTGTTGTTTGCAGTGGGAAAGTCCTCAAACCATGCCTTAGTACTGGCC
CAGCTGTACACCCAGGGTCAGTGTTACGGCATGCACCCCTTCATCGTACA
ACTGAGAAGCACAGAGGACCACACACCCTTGCCAGGTAATGCCATTCAAA
TGTTTCAGGTGTTTTTCTAAGGGATGTCCCTGTAGCACAACTAGTAGCAG
CATCACAGTTGAGGTCCTGGTTTGAATTAGTTGGTGACTGTTTGTAATCT
TTGGAAGAGCACCTTGGTTGTGGCTTCACCTGTTTTTTGAAGGGACGTAA
GGGTCCTGTGTTTGAGGAGGTGCCATGAGCATGTTAAAGGGAATCAACCC
CTCCCTGTAGAAATATACCCTACTACTGAAACAGCAAGGAAACTTTATGT
CCTATGTGCCACTAGGTGCTACAAGGGTCTGAACGAACAAACAAGGACTA
ATAGATGTTTCATTGTTTCCAGGTATCACCATCGGTGACATCGGGCCAAA
GTTTGGCTTTGATGAAGTGGACAACGGCTTCCTGATGATGGACCGTGTGA
GAATCCCCAGGGAGAACATGCTAATGAAGCATTCTCAGGTGACTTGTGAT
TGGTTGTTGACCTGGTCATGTGATGATGATGTGATCACAATGCTCAGAGA
GTTGTTAGATCATTTGACTGTATATAGTAAGTGCAAGGTTTACTCTCAGG
TCCGTTTGAGTTAGATCACTTTAGAAATCTAGATTGTTGCAAACAATAAT
TTTAATGAACATATAAATTAATACAATATAGAGCATTTAAAAGATCCCCC
ATCACTACATGTAGATCAGTTAGATGACTTTTTAGTAAATCTAGAGTATT
GCAAACAATCATTTTATGTACACCTGTATTTTCATGTTTCTGTTCTGTAT
CTCTGAATAAAGTTTGAAAAAAAAATGTAAAAAGAAGAAAAGCAATCATT
TTAATGAATAGATAAACAAATGATATATTGGACATTTAAAAGATTTCTCT
CTCTCACTGAATTGCAGGTTTTGCCTGACGGGACGTACGTCAAGCCTGCT
AACAGTAAGCTGGCGTACGGGACCATGATGCTGGTACGATCCTACATTGT
TTCGGATGCGGCGCAGTCCTTGTGTCGAGCCTGCACCATTGCTGTGCGCT
ACAGCTGTGTCAGGAGGCAGTCAGAGATGAAACCAGGGTCAGTAACCTTT
TTGTACCTCCCTTTAGTATCAGCTGCAGGGAAAGGGAAATACAAAATGTA
TAAGGGGGCCTGCATGGGGGCTACCGTGTCAATGTTGTTGTTCACCTTGT
AGTGCTTAGTGGCACATAGGTCAGCTAATTTCTTAGCTGTTCTGTAGCAG
AGTACCCAAGCTCCGCTCCCCACCAAGCAGAACTTGGGTAGCAGACTAAA
GCTAAGAAGGCTGGACTCCAGGCTACATGTATATTGTTACAGAGAGGCAT
TTCTAGCCCTTCCCCTTGTGTGCACAAGACCCCCATTTTACATCCCTTCT
GAAAGAACAATCCCTTCTGCAGCCCCAACCGAGATGACAGCTTTATCTTT
ACTGATACAGTACCCGTACCCCCCATGTGTTATTCAGGGAGCCTGAGCCC
CAGGTTCTAGACTACCAGGCACATTTCCCTTTACTAATACCTGTATCCCC
ACTCAGGGAGCCTGAGCCCCAGGTTCTAGACTAC Coding sequence (CDS) from alignment at Sc0000050:1123244..1127777+ >BlTCONS00062807 ID=BlTCONS00062807|Name=BlTCONS00062807|organism=Branchiostoma lanceolatum|type=CDS|length=996bp|location=Sequence derived from alignment at Sc0000050:1123244..1127777+ (Branchiostoma lanceolatum)
ATGTCGTCTGCAAAAAGGACCAAAACGAACCCAGACCTGCAGAAAGAGCG
GGACGGAGCGAGCTTCAACCCTTTCAGCCTGACCTGTCTGCTGCATGGTG
GAGAAGAGAACGTGGAGAGGAAAAGAGAGCTCGAGAGGCTGGCCTTAGAT
GACCCTGAGCTTCAACATGAGCACCTTAGCTTCCTATCCAGGGATGAGCG
TTACACCTTAGGTTTGAAGAAAACCATCCGCTTCCTCAACAAATGTTGGG
AGTTGGACATCACTGGCATTCAAGATGTTAATACCTATAGGAGGGCGGTG
TTCCTAGGGATGCTGGAGCCGTTGAGTGTTCACTACGGCATGTTCCTGCC
TACCTTACTGAGCCAGGCCACAGAGGCACAGCAGGAGAAATGGCTGTCCC
AGGCCCTTAACTATGCCATTATAGGAACCTACGCACAGACGGAGATGGGA
CACGGCACATTTCTACGTGGTCTTGAGACAACGGCGACCTACGACCCAAA
GACGGAGGAGTTTGTGTTGCACAGCCCGACACTCAGCTCTGCCAAGTGGT
GGCCGGGCGGGTTGGGAAAGTCCTCAAACCATGCCTTAGTACTGGCCCAG
CTGTACACCCAGGGTCAGTGTTACGGCATGCACCCCTTCATCGTACAACT
GAGAAGCACAGAGGACCACACACCCTTGCCAGGTATCACCATCGGTGACA
TCGGGCCAAAGTTTGGCTTTGATGAAGTGGACAACGGCTTCCTGATGATG
GACCGTGTGAGAATCCCCAGGGAGAACATGCTAATGAAGCATTCTCAGGT
TTTGCCTGACGGGACGTACGTCAAGCCTGCTAACAGTAAGCTGGCGTACG
GGACCATGATGCTGGTACGATCCTACATTGTTTCGGATGCGGCGCAGTCC
TTGTGTCGAGCCTGCACCATTGCTGTGCGCTACAGCTGTGTCAGGAGGCA
GTCAGAGATGAAACCAGGGGAGCCTGAGCCCCAGGTTCTAGACTAC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00062807-exon-Sc0000050-1564993656:1123244..1123620 | BlTCONS00062807-exon-Sc0000050-1564993656:1123244..1123620 | Branchiostoma lanceolatum | exon |
| BlTCONS00062807-exon-Sc0000050-1564993656:1124270..1124429 | BlTCONS00062807-exon-Sc0000050-1564993656:1124270..1124429 | Branchiostoma lanceolatum | exon |
| BlTCONS00062807-exon-Sc0000050-1564993656:1124946..1125106 | BlTCONS00062807-exon-Sc0000050-1564993656:1124946..1125106 | Branchiostoma lanceolatum | exon |
| BlTCONS00062807-exon-Sc0000050-1564993656:1125581..1125688 | BlTCONS00062807-exon-Sc0000050-1564993656:1125581..1125688 | Branchiostoma lanceolatum | exon |
| BlTCONS00062807-exon-Sc0000050-1564993656:1126109..1126228 | BlTCONS00062807-exon-Sc0000050-1564993656:1126109..1126228 | Branchiostoma lanceolatum | exon |
| BlTCONS00062807-exon-Sc0000050-1564993656:1126566..1126681 | BlTCONS00062807-exon-Sc0000050-1564993656:1126566..1126681 | Branchiostoma lanceolatum | exon |
| BlTCONS00062807-exon-Sc0000050-1564993656:1127111..1127280 | BlTCONS00062807-exon-Sc0000050-1564993656:1127111..1127280 | Branchiostoma lanceolatum | exon |
| BlTCONS00062807-exon-Sc0000050-1564993656:1127750..1127777 | BlTCONS00062807-exon-Sc0000050-1564993656:1127750..1127777 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000050 | genome | Sc0000050:1123244..1127777 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030832 |
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