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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000050:564533..571270+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00062697 ID=BlTCONS00062697|Name=BlTCONS00062697|organism=Branchiostoma lanceolatum|type=mRNA|length=6738bp|location=Sequence derived from alignment at Sc0000050:564533..571270+ (Branchiostoma lanceolatum)
ACAAGCCTCTGCCTGGTAGGTTAATGAAGTTGATAGGTAAGCAGCTATTG
ATTAAACTTCCTCAGCTTCTGATCTACCATCTGGAGGACCACCAGCCTAC
ATGTATATGATATGCCTGATAGGTTTTAATGGTTTTTACAAGAGGGTGAT
AGTTTCGTCGTATGTATGGTCAGTATTCGGTGATGCTGTGGTTGCCCTTT
ACCCACAGATCTGACAGATCTTAAATTTGGTTCCTGAAGTTTGAATGCAC
AGTCAGGACAGTTATTGGCGAACGTTATGTGCTATTCATCTTCAAATATT
ACTCAAAAAACTATCTAACAAAGATAAGTAGCGATTTACAAAGTCTGAAA
GAAAACAGTGAAGGCTAACTGATTCCACATGATCTGTTGTTGAACACTAG
GGGTGACAGTTGGTGACATTGGCCCCAAGTTTGGATATCAGGGAAACGAC
AACGGGTTCCTACGCTTTGACAACGTCAGGATCCCACGAGACAATATGCT
GATGAAGTACTCAAGGGTAGGTTTCTTCTTGTTCTTTGTTCAGATATCCT
TTATGCCGTTAAACCGTTGTGTACTTGTCGAAAAGAGGTAGGGGAATTTT
CCCAGCATAAGAAACCTGTAAAAAACTGTACATAGCGTTTGTCTTCTCTG
TCATGACCAGTGGAAGAATAGCTCTTCAGTGAGCTAAACTACATATGTAT
CATTTTTTTTCTTATCTTCTGTGCTCCCAGGTGGAACCGGACGGTACCTA
CGTGAAACCGCCCAGCTCCAAACTGGCGTACGGCACCATGGTGAGGGTCA
GGTCCATGATCGTTGGAGAGGCGTCGGAGTCTTTGTCCAAGGCGGTCACC
ATAGCGATCCGCTACAGCTGTGTACGTAGACAGTCTGAGATGAAACCGGG
GTAAGTAGAACCCTACCGTATCACCTATTTCTGTTCTTTTTCTTGCATCT
ATGTAATTTCATTATCATTGTTATTTATACAATGCTATTCTTTTATTTAT
TCTAATTCTGTTTTTGTTAATTATTTGCTGCATTTACTTAATTTCCCAAC
GATCTTCATTTGCCTTTTTAGTCTACTTGTGTCAAAGAAAGGCCGACTTT
AAAAAACATTGTTTTTCATCATATACTTTTTCATCAAAATATGCATCTAG
AATGTTTGTATTCTAAATTTATTGGTCACTCTTTGCTTGTCATGTATCCT
ACCATTTACAGTTGTACCAAGTTTTCATTTTGATACAGTCAAACCTGTCT
ATAGCGGTCACTCAAGGGACTGGCGAAAATTGGCCGCTATGTACAGGTGG
CCGCTATGGAGAAAAGGTCAATTAATTGACCTCGAGGGACACATGTTTTC
AGTACCAACTGAGATACATTTATTCACCGCACAGTACACATGTAAACATT
GCATACTATGATAGGTACAGGTCACATTTTAGAAGTTCGTTTGTTGCTCT
TTTACTTCTATTATTGGCTTGAAAAAAAGAAGTATTGTATCTGCCAACTC
CAAAACCCATGGCTTGCTCGAGCTTCATGTCTGAACAGACCAGAATCGCC
ATACTCTACTCTTGATCCTTCGCGACTGCTTCGCTGCCGGCACACGCGTC
ACCAACGAGTTTAAATCATATGAAACAAAGTCCTTCGCAGCAAAATGCCA
CCTAGTTAGTTAAGAACAAAATACATGTTGCTCAGTTGCCACTTACTGTT
CGTTTTCGACCGTTTTCAAACATAAAATCGCGGCGACAGTTTCCCTTTGT
CTGTTGTTGTTTATCAGCTTCTATCATTATGCTAATAGGGTACTCAGAAG
AAGGTCTCTCTTTTGATGGCTTTTTTGTCTTTTCAGAAAATTGCAACAGC
CCAAATTTTACATCAAATTAATATTATTTATATCTATTCTGAAGCTTTTG
GTAAAGTAATCATCCTCAGTGATACTTTGCAGTAAAATAAATTTAGCATA
TTATACCTCCGTATACTTCCGTTGACCTTTATGCTGGTGACTATCAGCGC
CATTTTGAACATCGCGCGAAACACGTTTTGAGCTCAATTTTGGATGAATT
CCCGGGGAAAACGGAAATTGGGCCGGCATTCAAACATTTCGCGAACTTAC
CGCATCAGGTANNNNGTGACCGTTATCGGCAGTGTTACTGTACTCGCGGG
ACCGAAAACCGTCTGGCCGCGACCGCGTTGGACAGGTGGCCGCTATAGCC
TAATTCTTAATGCTTATGTCAATGGGAAAAATCCAAGGGACCGACAAAAA
GTGACCACTATGGGCAGGTGGCCGCTATACAAAGGTGACCGCTAATACAG
GTTTGACTGTACTTTCCAACCCTAACTTCCAGCCAACCAGAGCCCCAGGT
GTTGGACTATGTGACCCAGCAGTACAAGTTGTTCCCCTACCTGGCTGCTG
CCTACGCCTTCATGTTTGCATCCCGGACCATGATTTTTGTGTACTTCCAG
TCCATGGCGAAGATCAGCAGTGGGGACATCACTGTTCTTCCAGAGGTACA
AACTGCCTTTGTTTCTTTGTTTGTTTGTTTGTTAGTTTGTTTGTTTGTAT
GTATAGTTCAAGTCCTGGGGTCAGGACATCTCATTGGGGGCTGCACCTCC
TTTTTGGAAAGGACATAAAATGGAGGAGGACAGCTGGAGTTTGCGTTATA
CAGACTATGGGACCTTTAGTTTTACCTTTTTAACCCTCCTTTTCCAGCTC
CACGCGCTGTCCTCTGGCCTGAAGTCCCTGTCATCCTGGGTGATGAATGC
TGGGATTGAGGAGTGTCGCATGGCGTGTGGCGGCCACGGGTACTCTCACG
CCAGTGGGATCCCCAGCATCTACATGGAACACACACCCGCCGCCACGTAC
GAGGGGGAGAACACCGTACTCATGCTGCAGACTGCAAGGTCGGTCAAGGC
CGTATTTGATATTCAAGTTATCAAGGTCAATGTTAAACCATGTTGTTTAT
TACCTGCACAAAAACGGTCATCTTTGAAGAGTATTAGTATTTCTTTGTGA
ACTGGTCAGTGAAGGTCATTTGGTCTGTACTGGGAATTGCCAAGGTCACT
CATTATCTCCATCATTGAACTCTTATACACATGTGTGTGTGTATGTATGT
GTGTGTTTGTGTGTATGTGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTGT
TTGTATGCATATGACAAATAACTGAAGAAGCTGAACTGATTGAACTGATG
ATTTATTTGCAGGTACCTGATGAAGAGTTATAACCAGTCCCTGCAGGGTG
AGAAGCTGGCTGGTTCTGTGGCCTACCTGTCCGGTGTACAGCCGATTCCT
GCAGCCGGTAGAACCAGGAACATTCTTGACCTTGGGGTCCTGATTGAGGC
CTACCAGCACAGGGCAGCCAGGTAGGGAATGTCAAGCTGTTGTTCACCTT
GCAAACCCGATTTGAACCTGGGTCTCCCAGTTATCAACTAATCGGAACCA
GGAGCTCAACTGTAAGCAGCTACGAGTTGAGCTACAGGGACATCCCTAGG
AAAAGTCATGACTCTATTTTAAACTTTATCACAAACAGGTAGACTCTCAT
ATGGTTTACACACCACTTCTGTCAGCGGTTGAAGACAGTTCAGACCAGGC
CTGTCTCCAAGACCCGTACCTCTGTCCTGGGACAAACATTTGGTCGTTGG
GACGGACAAAAATCCCACCCCATCTGTCAAGAAAATCTTAACTTCATGAC
ATGAAACTGATGAAAATATATTTTGTAAACTTAAAATTACAGATTCAACA
ATGAAAATTAACAACATAGGCATAAAATGAGTGTGATAGGAAAAAAATGT
AAGCAACTAAGCATTGTTAAGCAATTCTCAAAATTGTATCACTCATGTCC
TTTCTACATAAACATATTTCAGTTTAAACTCTTCAGTTGAAGAGTGCTGA
CTAGTATGTTCATTTCAGGCTAGTTCATGAGGCCGCCTTGCAGCTGAGAA
ATGAAAGGCAGGCTGGGAAGGACCAACCAGATGCCTGGAATGCCGCATCT
GTGGATCTTGTCAAGGCAGCCAAGGTTAGAGAACACAAGTAACATGATAC
ATGAACAGTTAAATACTTAATAAGACTTCCCGCATGTTTTATTTCATAAT
TGCATATTAGACAATGTATCCAGGGCTTCACATTCATACTACATATTAGA
CTTGAGTGAGTTTGGGTGAAGTGTTTAGGCATACCGTTTGGTAACATTTA
GAAATCTACAGACTGGCATTGAATTTTTCAGAGAAGAAAATGTCAGGTAA
GCAGATAACCAACAGTTAAACTATTTGTGCTATGATCTGCTTGCTAATCT
AACATAATGATAAGTTAAACTTGAAAGGTCATCTGCATTGGTAGATTGAC
AATGACTGGAGTTGATATGTTAAGAGTTTGGGTTACTCCAATTTTCAATT
ACAGTACAACTTTGATTTATGATATTAAGTGCTGCTCATTTATAAGCAGG
GACAAAGGATGCGACTGCAACAGATTTCATCTGAATCATTAGTAATGACT
AATTATACATTAATCATTATCATGTAACACTCCTCAGGCCCACAGTCAGT
ACTTTGTGGTGAAGAACTTTGCAGGGCGGCTGACTGACCCAGCCCTGGAC
AGCGCAGCGCAAGCTGTCCTGACCAGGCTGTGTCAGCTGTACGCTCTACA
TGGTGTTGTGGACAACTCTGGTGACTTCCTAGAGGTAAAACATTTTCTTC
TTCAAAATTAAAACATATCTTTACCACCATTGAACAGGTGTAATTTTAAC
ACCATCTTGGTCATCAATATCAAAGGCTATAGCAATGGAGATTGATGATG
AATGGAGATTGACACTGCCCCTGTACACCAAAAGGTAGATGGATTTTAAC
TAACTTAGTAACTGAACTTAGAGAGCAAAGCATATACTGATATACTGTTT
GGTAATGAACAAGACCCATTTTCACACCTTAGGATGACTACTTGACTGGC
ACAGACATCCGCCAAGCCAGACGTCACATCAACGCTCTCATGGCCAAGCT
CCGTCCTGACGCCGTGGCTCTTGTCGACGCCTTCGACTTCCCAGACGGGA
TCCTGAACTCCGTACTGGGGCGCTACGATGGGAACGTCTACGAACATCTG
TTGGAGTGGGCCAAGGCCTCTCCTCTTAACAAAACGGATGTGAGTCCAAA
CAACTGTTAACTTTAAGGTTCCTTGCCAAGCAAATTATCTAGAGTGCTGT
AGACCTTTGAACATAAGGGATCTAAATGGTGCATAAAGTCTGACTTAAGA
TCTGATTTAAGTAAGTTCTCCTGTGTATGCTTGACGCTACTATTATGACT
GTAATACAAGAATCACCTTTAAGATTTGAAGCTACCTTTAATAACCTTCT
TCCTGTCTCATCTCTCAAGACTACTCCTAGAGAAACAAGACTCTGCAAAT
CTTCTACTTCGTCCCTGATAATGAACTGACTTAGTGGTATACTAGTTCAT
GTATGTGGGCTACAAATATTAGTTGTAAAATAAATTTACATGGAATTGAT
TTTCACCTATATCTTATCTGTTTTCTTCAGGTCCATGAGTCTTATCACAA
GTATCTGAAACCCTTCCTGGAGGCCAACAGGGCAAAACTGTGAGAACAGT
GGCCACCGATCGACCGAGAAAAGGGCAAGATCTTAAAACTGCCATCAAGT
GTTAGATGTAGGGACAGTGTTTTATTCCAAAGTAGTCTTAAGTAATCAAG
TAATCAAATACTTGATACTACTACAGTCAAACTTGGATTAAGCAACCAAT
CAAGGGACTAAGGATGAGAATTACCAACTGTTGCAAAACACATCTGATAT
ATAGATTTTACACCACAGCAAAGATGTTGACTAATGAATTCATGTATGAA
TAAATAAATATTATATATATTTATATAATCATAATTATGACAATGTGATA
TCCGTTTTTGTAAAACGTTTGGTGGAAAATTGTATATGGATACCTTTTGA
AGATGTTTTATATCATTGCCTCTGTCTGCAATAAGAAAATATGAACCACT
AAATAGATTATTAACAGTTTATTGTAAAGATTAATGTGCTAATAATGATA
AATATGGACGTATTGTCCCTTTTTACACAGACCAATGTTACATGTAACAC
TATAACATGTGATTAAATTGAAAGACTTTCAAGTATTTCAATCACAATGG
ATAATAGGTACAGAATGATACAGAAGCTGGTGTATTATTTTTTTATGCCA
AAAAGTGATTATTGTATACAGAATGATACACTGCAGATAATGATAACTTC
TCAGTACTGATTGGTCCATGCACTGTATAGTCTAAAATGCTTCCACACAC
TCAGCTGTTGAGATTATTTTACATTTGATTCATTATCATTTCTAGTGGGA
AGCAGGTTTATCATTCTCTTCTATGCATTGTCTACATGTAGCCTGGAGTC
CAGCCTTGCTAACTTTGGTCCGCTCCCAAAGTGTTGGCGGAATAGCAACC
AAACCTAACATGGCTGGAATCCAGGCTACCATTGTCTACTTGTCCTGACT
ATTTTGGTACCACAATAGCTTGGATTTTGTCTAATTGAAGCAAAACATTA
AAATATTGGATCACCAACACCGGGGCTCCTAGTTTTTATGTACCATGTAC
ATGTACTTTGATCATGCCTCAGGTGAGGTGACAAGCCAAGAAGGGACTCG
AACCCATGAGATCTATGTTGTTGGTGAAGTTTTGGAAGATCAATGCATGG
TTTTTGGCTGACCTTTCACATATACTTTTCATAGTTTT Coding sequence (CDS) from alignment at Sc0000050:564533..571270+ >BlTCONS00062697 ID=BlTCONS00062697|Name=BlTCONS00062697|organism=Branchiostoma lanceolatum|type=CDS|length=1335bp|location=Sequence derived from alignment at Sc0000050:564533..571270+ (Branchiostoma lanceolatum)
AAGCCTCTGCCTGGGGTGACAGTTGGTGACATTGGCCCCAAGTTTGGATA
TCAGGGAAACGACAACGGGTTCCTACGCTTTGACAACGTCAGGATCCCAC
GAGACAATATGCTGATGAAGTACTCAAGGGTGGAACCGGACGGTACCTAC
GTGAAACCGCCCAGCTCCAAACTGGCGTACGGCACCATGGTGAGGGTCAG
GTCCATGATCGTTGGAGAGGCGTCGGAGTCTTTGTCCAAGGCGGTCACCA
TAGCGATCCGCTACAGCTGTGTACGTAGACAGTCTGAGATGAAACCGGGC
CAACCAGAGCCCCAGGTGTTGGACTATGTGACCCAGCAGTACAAGTTGTT
CCCCTACCTGGCTGCTGCCTACGCCTTCATGTTTGCATCCCGGACCATGA
TTTTTGTGTACTTCCAGTCCATGGCGAAGATCAGCAGTGGGGACATCACT
GTTCTTCCAGAGCTCCACGCGCTGTCCTCTGGCCTGAAGTCCCTGTCATC
CTGGGTGATGAATGCTGGGATTGAGGAGTGTCGCATGGCGTGTGGCGGCC
ACGGGTACTCTCACGCCAGTGGGATCCCCAGCATCTACATGGAACACACA
CCCGCCGCCACGTACGAGGGGGAGAACACCGTACTCATGCTGCAGACTGC
AAGGTACCTGATGAAGAGTTATAACCAGTCCCTGCAGGGTGAGAAGCTGG
CTGGTTCTGTGGCCTACCTGTCCGGTGTACAGCCGATTCCTGCAGCCGGT
AGAACCAGGAACATTCTTGACCTTGGGGTCCTGATTGAGGCCTACCAGCA
CAGGGCAGCCAGGCTAGTTCATGAGGCCGCCTTGCAGCTGAGAAATGAAA
GGCAGGCTGGGAAGGACCAACCAGATGCCTGGAATGCCGCATCTGTGGAT
CTTGTCAAGGCAGCCAAGGCCCACAGTCAGTACTTTGTGGTGAAGAACTT
TGCAGGGCGGCTGACTGACCCAGCCCTGGACAGCGCAGCGCAAGCTGTCC
TGACCAGGCTGTGTCAGCTGTACGCTCTACATGGTGTTGTGGACAACTCT
GGTGACTTCCTAGAGGATGACTACTTGACTGGCACAGACATCCGCCAAGC
CAGACGTCACATCAACGCTCTCATGGCCAAGCTCCGTCCTGACGCCGTGG
CTCTTGTCGACGCCTTCGACTTCCCAGACGGGATCCTGAACTCCGTACTG
GGGCGCTACGATGGGAACGTCTACGAACATCTGTTGGAGTGGGCCAAGGC
CTCTCCTCTTAACAAAACGGATGTCCATGAGTCTTATCACAAGTATCTGA
AACCCTTCCTGGAGGCCAACAGGGCAAAACTGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00062697-exon-Sc0000050-1564993656:564533..564547 | BlTCONS00062697-exon-Sc0000050-1564993656:564533..564547 | Branchiostoma lanceolatum | exon |
| BlTCONS00062697-exon-Sc0000050-1564993656:564933..565048 | BlTCONS00062697-exon-Sc0000050-1564993656:564933..565048 | Branchiostoma lanceolatum | exon |
| BlTCONS00062697-exon-Sc0000050-1564993656:565263..565432 | BlTCONS00062697-exon-Sc0000050-1564993656:565263..565432 | Branchiostoma lanceolatum | exon |
| BlTCONS00062697-exon-Sc0000050-1564993656:566865..567027 | BlTCONS00062697-exon-Sc0000050-1564993656:566865..567027 | Branchiostoma lanceolatum | exon |
| BlTCONS00062697-exon-Sc0000050-1564993656:567230..567420 | BlTCONS00062697-exon-Sc0000050-1564993656:567230..567420 | Branchiostoma lanceolatum | exon |
| BlTCONS00062697-exon-Sc0000050-1564993656:567745..567903 | BlTCONS00062697-exon-Sc0000050-1564993656:567745..567903 | Branchiostoma lanceolatum | exon |
| BlTCONS00062697-exon-Sc0000050-1564993656:568451..568556 | BlTCONS00062697-exon-Sc0000050-1564993656:568451..568556 | Branchiostoma lanceolatum | exon |
| BlTCONS00062697-exon-Sc0000050-1564993656:569070..569216 | BlTCONS00062697-exon-Sc0000050-1564993656:569070..569216 | Branchiostoma lanceolatum | exon |
| BlTCONS00062697-exon-Sc0000050-1564993656:569465..569671 | BlTCONS00062697-exon-Sc0000050-1564993656:569465..569671 | Branchiostoma lanceolatum | exon |
| BlTCONS00062697-exon-Sc0000050-1564993656:570063..571270 | BlTCONS00062697-exon-Sc0000050-1564993656:570063..571270 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000050 | genome | Sc0000050:564533..571270 + |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030808 |
|
