BlTCONS00062635 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00062635
Unique NameBlTCONS00062635
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000050:112166..114272+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00062635 ID=BlTCONS00062635|Name=BlTCONS00062635|organism=Branchiostoma lanceolatum|type=mRNA|length=2107bp|location=Sequence derived from alignment at Sc0000050:112166..114272+ (Branchiostoma lanceolatum)
CACATAACTCACACCTGTAAGCTGACTCAGTTCTGTTGCAAAGTTCTTTT CTGTAGCTACAATATAGATGGATGTCAGGGTAGGTGGCGTGGTTGTACTT GTTTTGCTGTGTTGAAATGGTGGTGAAATTTAATACATTTCGGAAACACC TACGATAGATGTTTTCGACATGCATAATTGAACTGTCGTGCTAATGAAAG AAATAACGAGTCTAGTCATACACGCCACGAAGCCAGCTCGGAAGGGGTGT ACCTGATACAGTGGACTGTGTTAGAGTTATGATAAGAATGTACAAATTAA ACTTTGTTCACGCCACGAATGCATCTCCAACATCCTTCTCAATACAGTAG TCTAATTTTGTTTTGGTCACATAAATGAAGTGGTGGCGTGAACTTACTTT TGTCATTTTTTATTCGCAACAAGTTTTCTTTCAGGGAAAAAAACACAGTA AATTTTACTTCTAAAGAAAGGAGAGAGGCGGGACAAGCCTAAAAGTTTAG AAAACACCTTAGACATCCAATNAAAGCACCTCAGACATCCAATAGGTCTA AAGAATTCCACACTGATACCTAATTAAACGATATGGATGACCCTATAGCT ACTGTCCCACCGTACTGTTCTTTCTTATCACACTACTGTCCTTTTTTAGC CCCAAGGAAAATTTAGCACTTGCCAAAATGTGTATTTCCTTAGTTTTGAT CGCGTATATGTTTGTTGACCGTCAACATTGCTTTCTTACCAAGAAATAAC GGATTTCCTTCGTGGCTATCCTTTCGTTTTGTTTTGATCTTAAATATTTA CCACCACAAAAACATTCATGGCTGCCTGTCCCCCTCTAGGTGGATGGCTT GAGACGGACCCTACGTGGGTGACGTCAGAGGACGAGGACAGTGATGGGTC TGTTCCCGGGTACGTCCTTGACGCCAATCTGTGGTCCGGCTGGAAAGGTT CTCCCAGAAGCGCCTCCTGGCGACTCACCTTCGATCTGCAGACCTCCGTG ACGTTATCCCGCATCCGTATATGGAAGTACGGCGGTGCGCTTGACGTCAC GGTCTCACGATTCGTGTCGTCAAGGCGACAGTGGAACGTGGTGACACAAC AGACCGGCGTCGAGCTGAGCCATTCCCACGCCACCGAGCTGCGCGGGTTC CGCCACGCCACCGCGCAGGACTGGCGACTGCAGTTCGCAGACTGGTCGCT GTCCACACAGATCACCGAGGTCGAGTTTTTCCAGGGTAAGCCGATTTTCA TTATGATGTTGTTGTTGTTGTCTATAAAGATGATGATAGTGCTGTTGGTG TTAATGTTGTTGATGATCATATTGATGATAGTATTGGTGATGATGATGTT GATGATGATGATGACATAATAATTATGAAGGTGATAATGACAATGACGTT GTTGATGGTGCTGTTATTGTTGTCTTAAGATGATGATGATGTTGATGATG ATAATGATGATGGTGTTGATGTTGATTATCATATTGATGATGGTGGGGAT GAGTTTGATGAAATATGGTGATGACGTTGTTGATGCTGGAGCTTTTTTGT TGAAGTTGACGGTGATGTTGATTTTGATGAAGATGATGTTGACGATGATG ATGATGATGATGTTAATGTTGATGTTGTTATTGATAATGANTGATGACAT AATAATTATGAAGGTGATAATGACAATGACGTTGTTGATGGTGCTGTTAT TGTTGTCTTAAGATGATGATGATGTTGATAATGATGATGGTGTTGATGTT GATGATCATATTGATGGTGGGGATGAGTTTGATGAAATATGGTGATGACG TTGTTGATGCTGGAGCTTTTTTGTTGAAGTTGACGGTGATGTTGTTTTTG ATGAAGATGATGTTGACGATGATGATGTTAATGATGATGTTGATAATGAT TAAGATGATGATGATGATGTTTATGATGATACTGTGGTTAATGATGATGT TGCTTGATATCGATGCTGATGCTAATAGTATCACGGTACCCCTCAAGATG AATGTAGCTGATACACCATCCTCTGCCCATCCAGCTTGCTCCGGGTTTGA CATGCAGGTCTGTACAGACGGGAACTGTGACGTGTACGAGGTACTGTGTG ACGAGAT

Coding sequence (CDS) from alignment at Sc0000050:112166..114272+

>BlTCONS00062635 ID=BlTCONS00062635|Name=BlTCONS00062635|organism=Branchiostoma lanceolatum|type=CDS|length=489bp|location=Sequence derived from alignment at Sc0000050:112166..114272+ (Branchiostoma lanceolatum)
ATGGCTGCCTGTCCCCCTCTAGGTGGATGGCTTGAGACGGACCCTACGTG
GGTGACGTCAGAGGACGAGGACAGTGATGGGTCTGTTCCCGGGTACGTCC
TTGACGCCAATCTGTGGTCCGGCTGGAAAGGTTCTCCCAGAAGCGCCTCC
TGGCGACTCACCTTCGATCTGCAGACCTCCGTGACGTTATCCCGCATCCG
TATATGGAAGTACGGCGGTGCGCTTGACGTCACGGTCTCACGATTCGTGT
CGTCAAGGCGACAGTGGAACGTGGTGACACAACAGACCGGCGTCGAGCTG
AGCCATTCCCACGCCACCGAGCTGCGCGGGTTCCGCCACGCCACCGCGCA
GGACTGGCGACTGCAGTTCGCAGACTGGTCGCTGTCCACACAGATCACCG
AGGTCGAGTTTTTCCAGGCTTGCTCCGGGTTTGACATGCAGGTCTGTACA
GACGGGAACTGTGACGTGTACGAGGTACTGTGTGACGAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00062635-exon-Sc0000050-1564993656:112166..113400BlTCONS00062635-exon-Sc0000050-1564993656:112166..113400Branchiostoma lanceolatumexon
BlTCONS00062635-exon-Sc0000050-1564993656:114200..114272BlTCONS00062635-exon-Sc0000050-1564993656:114200..114272Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00062635BlTCONS00062635-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000050genomeSc0000050:112166..114272 +
Properties
Property NameValue
GeneIDBlCUFF030782