BlTCONS00062570 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00062570
Unique NameBlTCONS00062570
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000049:1781960..1784105-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00062570 ID=BlTCONS00062570|Name=BlTCONS00062570|organism=Branchiostoma lanceolatum|type=mRNA|length=2146bp|location=Sequence derived from alignment at Sc0000049:1781960..1784105- (Branchiostoma lanceolatum)
CACGTTTGAAGGTCGGAATTCGAGCACCGACGGACACTAGAACCCTGTGT CTTGCTGTCGGGGTGAAGCCTCTAAGTACAGCGTTTGGGTGGAGAGTGCG GTAAAGTGAATGTTGTTATTTGTTGGCGTTTTCTTGAAGTTTTGTTGTAT TCTTTTTCGGACGCCGTCTGCACACGTGTTGATTTACATTTGTGTAGGTG TGTGTCTGGCGTCAGCTTTTCTGTCTTTTGCACTGTGTGATTTGTATTTG ATAGTGTGCGTGGGAAGGGCACTTTGTGAGGAATGGGTTTGGTACGTGGT TGAAGTACTTATCTTAGAAGGGAGGGAAACTCGTGACAAGAATCCCATAG TGACCATGTTCGGTGTGTGCCGGCATGGCGGAGGACTGCTCGAGTGGGGC TTAGGTGTTTTGGATGTCTCATCCGTGTTTCTGACGTTGATGTTCTTTTG GTATTGAAGTTACAGTATGGCCACCGAGACCCGAGCCGTCCAGACATAAT GGTCCAGACAGGAGATACCGAAGAGTATGCAGTGGGTGCAGCGGACGCCG CCGCCGGCTTCCTCGGCTACGTTGACGCTGCTGCGGTGGGCGCCATCGGC ACCACAGGGGATGCGGTTTTCACTGGCACTGGTGCCGAGGGAGCGAAGGA TTCCGTCCACTCCGTTAGAGCGTGGAGATTACGGCAAGGTGGCAGTTGTT ATTTGTTGGAATTCTTGAATTTTTGGTTTATTCCTTTTTTGGACGCCGTC TGCACACGTGTTGATTTGCTTTGGTGTTCGGGCGTTAGTTTTTTTTAGCT GCGTGATTTGCATTTGATATTGTGCTTTGGGAGGGCACTTTGTAAGGAAC TGGTTTGGAACGGGGTTTGAAGTGAATTTGTGTTTAGAAAGGGAGGGAAA CTCGTGACAAGAATCCCATAGTGACCATGTTCGGTGTGTGCCGGCATGGC GGAGGACTGCTCGAGTGGGTCTTAGGTGTTTTGGATGTCTCACCCGTGTT TCTGACGTTGCTGTTCCTTTGGTAATGAAGTTACAGTATGGCCACCGAAA GCCGAGCCGTCCAGACAAAGGACACAGAGTGCAGTGGATGCCGCGGACGC CGCCTCCAGCTGCCTTGGCTACACTGACGCTGTTGCAGCGGGCCTCACCA GGACCAGGGACAGGGGTTGAGGGCTCCACTGGCGCCGGGGGAACGACGGA CTCCGTTTGCTCCGTTTGGGCGACAGAATCAGCAAGCCTTGCTGGCTCAG AACACTTTGCAATCGCCCGCAATGTCGTTGAGCGTTTCTGCATCCGTGGG GTTTCTCGTCAGGCTGTTTATAAATGTTTTGTTTGTATTTGCATACAGAG TCGGCGACACCGTGACACACGTCTAAGGGATGCAGGAGAAGTTCCCCAGG ACGATGGTGGCATCCTCTTCACCATTAACAGTGAAAGATGGGCCAGGAGA GGAGCAGGGCAGCTGTAGCAGCAGTCACTCCGCAATAACAGCAGAAGCGG CACGCAGTGAGTATCACTGCCGAGAGTCTTTTCCGACTCGGAGAAAGGAG ATGTGCAGTTGGGTGTCTTAGGATTACATCAGTCCCGGGTACGGATTGCG CAAGTGAGCCAGCTGTAAGGAGTGGTTCAGTTTGTTTTAGCGTTTTTTTT CCATTTTAAGTTTTTATTATGATTATGTTCGNAGTGAGCCAGCTGTAAGG AGTGGTTCAGTTTGTTTTAGCGTTTTTTCCATTTTAAGTTTTTATTATGC TTATGTTGGTGACAATTGTTTAATTTGGTGCTGTTTTTTAATGTTTTGCA TCATGGTTTCATTGTGTGTACTATGTGTTATTGTATTTTGGAAAACAGTG CTTGTACGGACTCCCGGTCGTTCGCGCTTTGTGTCACTGTTAGTGTGTGA ATTTCAAGTTGCGTGGACCGGAGAGTTTCTGGTTATGGCGTGTTTTCATT TGTGATGAAACGGCGCGCATGTGCGAACTTCTGATCGTTCGGGCTTGGTG TTTGCTAGCACTCTTAGTGTGCGAGCACCGGGTAGCGTTGGTCAGTCGTT CGCGTATGGCTGGTGTTTCATATTGTGGGAAACGGCGCGCATGTGCGGAC TTCTGATCGTTCGGGCTTGGTGTTTGCTAGCACTCTTAGTGTGCGA

Coding sequence (CDS) from alignment at Sc0000049:1781960..1784105-

>BlTCONS00062570 ID=BlTCONS00062570|Name=BlTCONS00062570|organism=Branchiostoma lanceolatum|type=CDS|length=330bp|location=Sequence derived from alignment at Sc0000049:1781960..1784105- (Branchiostoma lanceolatum)
ATGGTCCAGACAGGAGATACCGAAGAGTATGCAGTGGGTGCAGCGGACGC
CGCCGCCGGCTTCCTCGGCTACGTTGACGCTGCTGCGGTGGGCGCCATCG
GCACCACAGGGGATGCGGTTTTCACTGGCACTGGTGCCGAGGGAGCGAAG
GATTCCGTCCACTCCGTTAGAGCGTGGAGATTACGGCAAGTTACAGTATG
GCCACCGAAAGCCGAGCCGTCCAGACAAAGGACACAGAGTGCAGTGGATG
CCGCGGACGCCGCCTCCAGCTGCCTTGGCTACACTGACGCTGTTGCAGCG
GGCCTCACCAGGACCAGGGACAGGGGTTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00062570-exon-Sc0000049-1564993656:1783418..1784105BlTCONS00062570-exon-Sc0000049-1564993656:1783418..1784105Branchiostoma lanceolatumexon
BlTCONS00062570-exon-Sc0000049-1564993656:1781960..1783075BlTCONS00062570-exon-Sc0000049-1564993656:1781960..1783075Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00062570BlTCONS00062570-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000049genomeSc0000049:1781960..1784105 -
Properties
Property NameValue
GeneIDBlCUFF030761