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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000049:1772211..1781014- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00062564 ID=BlTCONS00062564|Name=BlTCONS00062564|organism=Branchiostoma lanceolatum|type=mRNA|length=8804bp|location=Sequence derived from alignment at Sc0000049:1772211..1781014- (Branchiostoma lanceolatum)
GAACACCGAGTAGCGTTGGTCAGTCATTCGCGCATGGCGGGTGTTTCGTA
CGTTGGGAAACGGCGCGCATGTGCGGACTTCTGATCGTTCGTGCTTGGTG
TTTGCTAGCACTGTTGTGTGCGAACACCGAGTAGCGTCGGTCGGTCGTTC
GCGCATGGCGGGTGTTTCATATGTTGGGAAACGGCGCGCATGTGCGGACT
TCTGATCGTTCGTGGTTAGTGTTTGCTGGCTCTGTTTGTGTGCGAACACC
GAGAAGCGTTGGTCAGATATTCGCGTATGGCGGGTGTTTTGTTTATATGT
TGGGAAACGGCGCGCATTGAGGACTTCTGATCGTTCGTGTTTGGTGTTTG
CTGGCATTCAACTCGGGTGCTTTACGTTTAGATTATGGTTACGCTACGAG
ATGGTGTATACAACGTGTTTGCTTTGGAATGAATAGCAGACCCATCCGCC
CATCCGGATCTCGCCCATATTGTTTTTAAATGGATGCGTCATGTTGTGAC
ATCAGGGACGGTTTTACAAAAGTATTGAAGTAATGGAAACCGGAGGTCCA
GCAAAATATTTGATATCTGAAACTTTTGAAACTTTTTGAAACTTCATTGA
CAAATACCACATCGCAGATTGGCAAGTCTGAATTGGCGAGTATTTTCACA
TTTGCTCGCATAAAAATTGTGTGATTATATACAAATATACAAAGTTTACC
AATGGTGCTATTTAAAATGACTTTTCATTTACAACACAGAAACGACGTGA
GGACAGCTGACGTTGTAAACATTGAAACATTCGAAACGTGACAGGATTAT
ATTGTTTGGTACAATGGAGTAGGGAAAACATGGAATTGTTAAGGAGATCA
GTCACTTGTTCAGCAGGGATACAAGGTACGGAATCGGAGAGTTTTTGAGT
CTTGGTGCGACAGAGTGGTGTGTTAAGTTTCTGTTTGTTTCTGGTGTTCC
GGCCGGATATGTCCCCTCTTGTGCTCGGAGGCCAGCCCCTGAAGTTGGAC
TCCATCAGAGATCGTGCAAAGTTGAGACACAAGTCCTTTCTTCTTTGTGC
CAGTGTTTTCAGTCCTAGCTGTTGCAGGGCGTGGGAGTAGCCAGTGTAGT
CGTTGCCCAGAATAATCCGGCAGGCACGTTTTTGGATCTGTTCGAGTTTC
TCAGTTTGCAGTTTGGTGAGGCCACATGTCCAGGCAGGTGCAGCGTATTC
TAAGATCGGTCTGATATAGCATTTGTAGATCGTGATCAGGTCATTACGCG
ACAACATGAACCTTTTGAGTCTTTTGAGGGGGTAGAGTTTCTTTGCGGCC
TTTCCCACCATCTGCTTGACTTGGACGTCCCAATGAAGGTTGTTCTGGAT
GTGGAGTCCAAGGATCTTAAGGCTGGGCGCGACAGCTAGCGGTGCATTGC
TGACTCGCAGTGGTGGCAGAGGGGGATAGTTCCGACAGAATGTGATGTGC
ATAGCAAGGCATTTAGAGTCGTTTAGTAGCATATGGTTGGTTAAAGTCCA
TTGGCATAACTGATCCAGATCAGACTGTAGGGTTGAAGGTTGTTTGAGCA
GTCTTGATTGGAGCATGTTCATATCATCCACGTATTTCCATACCGGACTA
GAGGCATCAGAAGCAGCATCGTCAATCAGTACCAGGAATAATATGGGGCC
TAGTAGAGTTCCTTGCGCAACTCCACATGTCAGGTGTTCCCACTCTGAGA
GAGCTCCACGGTAGCGCACGCGCTGTTTCCTGTCGGATATGAAGCTGGCC
ACCCACGGTATGAGTTCAGGTCGGAGTCCCATGGTTAACAGTTTGGTAAT
GACGGTGTGATGGTGGACTCTATCAAAAGCTTTGGAAAAGTCTGTAGCTA
CGAGAGTGCATACTGTAGATGGTTTGTCCGTCCCCTTGAATAGGCTGTCT
ACCAGACTGACGAGTGCATGCACTGTAGACCGCCCTTTAAGGCTGCCAAA
TTGTCGGTTGTCGAATGTAATGTCTTTCAAAATCCAAGAAAGGGCAAAAT
GTTCCGCTATCTTTGAAAACTGGGAAGTCAGAGAGATGGGTCTAAGTTGA
TCGATCTTGGCTGGTTTGGTTTTTGGTACGGGTACCACAACTGCTTGTTT
CCACGGACAGGGCACTATGCCGCTTGCGAACGAGGCGTTGAGAACATGGC
AGAATGGAGAGCTGATTTCACAAGCGAATTCCTTCAACAGTTTCAGTGGT
ATGTTATCCGGTCCCGGTGCCTTGTTTGTTTTCACTGCTAGGAGGCGCTT
GTAAATGTCCCAGACTTGCAGGGTGGGCAGCTGTTGTGGTGCCGGGAGAA
AGGCGGGTAGTTGAGTAAAATCCAGCGCAGGAAGGGCTTTGGAGACTTCA
GCAAATTTGGCATTTATGGCATTGGCAATGGTGGTGCTGTCTTCAGAGTC
GAGCCCTGGGAGTGTGATTCCACAGTCAGACTTTCTCACGTTAGCCATGT
TCATGATTTCTTGATACCACTGTCTTGGGTTGGCTGCCTTTAGGGATGAG
ACCCTGTCTGTGTAATATGTCTTCTTTGCTTTGGCCAGTGTTCTTTGTGT
CAGGTTTCTGTAGAATTTCCAGACGGTCGGAGACTGTTTGTGAAAAGCCT
TCTGTCGGAGGCTAATCAGCTGTTTTATCTTGGGCGTTACCCAAGGCTTG
TCAGAGTTATGTACTTTGACAGACTTGGTAGGAAAGAAAGTGTTGATGGC
GTTCTCAAGAGTGTTATGAAAGGCACTGGCCTTTTCTGAAACCCCCTGTG
CATTATAAACTTCAGTCCACTTATGCGCCGTGATCCATTTGCCGAAGTCA
AACATTCCAGTTTCACAGAGTTTACGGACCTGTTTCTTTGTACATTTGTT
GTCAGTGGTTTTGGATTCAGGGATCCAAAGGACAGACGAATGGTCACTAA
GGCCTACTGGAGGCAGTATAGAAGGACGCTTGTACAGGTATTTCATGTTG
GTCAAGATCAGGTCGAGAATGGCGTTACCTCGGGTGTTGTCTTTTACAAC
TTGGGACAGGAGGCCGCCTCTGCAGATATCAGAAACATCAGTCCTATTAA
AGTCTCCTAGTATTGCGAAACCACAATCTGGATACTTCGTACGCATGTTG
TCGGTGACTGCAAGTACATGGCCAGCAAAAGTGTCACGATGTGGGGAGTC
AGGGGGTAGGTAGACTCCACAGACTACGATGCAGGACAGGGGTCTTGGGA
GTCGTCGGGGTCTAGTCATCACCCATACACATTCCAACTCATCCGGTACA
GGGCACTCGCTGAGCTGTCTTGATGATATAGTCTGATCAACGTATACGGC
AACTCCTCCGCCTCTTCTGTCCCTCCTGTGTTTAGAGAACAAGTTGTAGC
CACTTACTGTTATAGCTGACTCGGGATGGTTGTCCGATAGCCAGGTTTCC
GACACGACCGCAATATCGACCTGGTTTTGTGAGAGGGTGGCTTGAAATTC
GTCGATTTTGTTGACTAAAGATCTCGGGTTGCACAGGAACATTTGTGGTA
CACGGTGTTGCACGTTGATGACGAGTCTTATATCGGAGGACATATAAGAA
AGGGTCGAAAGGCAGGGGTGAGAAGAAGGACAGGGGAGTTTGAAATGAGA
AAACAAGTGTCCATACTCGTTCTTCATAGTATGCAGATGGAATGGTTTTG
ACGTCTAACAATAATTCCGATGATTGAAAGTTGGTGTGATTAAAAAACGT
TGAAACATGAATAAACGTCTACTGTGTTTATTAGAAAGGGTGAGAGATAA
GAAAGGGTGGTTGAAAGATTGAAGGCTATGAGGTTGGGGTAAATAGATGA
TGGTTGATAAGGATGGGGGTAATATATGAGAATTATCTAATGAGAAATAA
AGTAACAAGATAGCATGGGAACGAGAGGAGACAAAGCGACTTCGGCATTC
CCCCATAACTTAATCACACATGAAGGATGATCCAATGAGTGCGCAGTGTG
GATAGGAAACTATCTTCACTGCGCGCTGATTGGATGATCCTGAATCACAT
GATTCTCACTACCATATAAGTACAGCGGAAGTTCACCTAGTATCTGCCTC
TTGTTGGATTCATCCGCAAAGCCGAGGAGCGTGGTGAGGTCGACCCAGAA
AACGTTAGTGCTAGGGGTTCTCCGAGGTGGGAAACAGAAGGGTTTTTCGG
CCTAGGGAAGTCACCAGTTGACAACACACCCACCCACCCCACCCTAGCTC
ACATACGTTAACAGTTTACAAGGGTCCGGCTCCGCCGCGCGACTTCGGCA
TTCCCCCATAACTTAATCACACATGAAGGATGATCCAATGAGTGCGCAGT
GTGGATAGGAAACTTTTTCCTAACCCCCTATACAGGGAGCATGCGCATCA
CAGCAGTTAGCAACGGCGGTCAGGAGCGGAAGTTCGTGGGAGGCTCTCAG
CAGCTGAGCGAAAAGATAGCAGAAATTCTGGGAGGTACGTCACACCCTCG
ATATCAATCAATCAATCAACCAACCAACCAAGCAACCAATCAATGATATG
CTCATTCAACCAATCAATGTCTTAGGTAGTTGACTCGTAGATTTGTTGAA
GATCACACGTTTAGCGACCCTCACAATGCCGAGTGACGGAGTGTTATTAT
GACGATTATTTTTTTCCAGACCGAATCGATTTCTCCAGTCCGGTCCTTCG
GATCGAACAGCGGCGAGACAAGGTCGTGCTGTACACACAGGACGAGCGGA
AACACGAGGTGCGCATGCGTCAACAACTTTTTTTAGTACCTTTAACTTTG
CTCCTTCGGTCTGTGTGTGGTTAAAATAGAAAATCATTTTACCCTTTTTC
TCCCATACTTTAGGCTGAGTACGTGATCCTTGCGATCCCCCCACCTCTGC
TCCAGAAGATTGTCTTCTCTCCTGATCTTCCATCCTCCAAATTGCAACTA
ATTAAGCGCATGCCCATGGGCTCCGTCGTCAAAACCTTTATGTACTACGA
GAGCGCCTTCTGGCGAGAAAATGGTAAGGTGCAGACTTATCATTTGATTC
ACAGATGTAAAACAAGCGTCAAAATTGTTTGTAAAAGTTGAACAGCCATT
GCTTGAGGAGAGCCACGCAACTAGACAGTTAATCTACACACTGCAGTACT
TACCGGTAATGCATAAGAGTAGAAACTTCAGGTTAACAAGGGAACTTCCA
GGTTTAACCATCCAACATGGCGGACAAATTACTGACGTCATAGTACTAGT
CACGTGAGTACAGACAACCAATAGAAAGACTTGATACGTCTCCCATCCCT
GCAGATTACTGTGGGTTCGCTGACATTTACGACCCGGCCTACCCTGTAGC
CAACACCGTGGACGATACCAAACCGGACGGCGCCTATCCTTCCATCATGG
GGTAAGAAAATAACACTTTACATATCACGTCTAACGAGGTATTATCCTGA
AGAAAAAAAAACAATCATAAAATCACTTTCTACTAGTGACGTTGTGACTT
TGGCACCATGTTGATACATAACAATTGTATCTTTTCGTAAATTCATTACA
TATTACTTTATGTGTAATTTCAATTTTACACACACTGATTAACATTCTAT
GTTTTCAGATTCATCTTGGCGGACAAGTCTAGGGAATTTTCACACTTAAC
ACAAGACGAAAGGTAACTACCGATTTAATTTAGAGCTAACACACGCGCCA
CACTATCTGATCGTTAAAAACGTGTCTCTTAAAAAAACTTTTATCATATA
AATTGTCTCCTCCTCCCCAGGAAGGAAATAATCTGCCAGAGCTACGCCAA
AGTCTTCAAGTCAGACAAAGCCCTTCACGTATGTATGATGTTTTCATGCA
GATACCCTTTAAAAACAGTACAAACACAAACATAAGTAAATATTGCATTA
AGGTCAATCTGTGCTGTTACAAAATGTTTTCCTATGCAAGGAAATAGACA
GATTTTCGACCCGGTCTAAGGACGTCTCCCTCAGGATGACCCATTGCTTA
CGTTACGTACATGCAAAGTCACGTGACCAGAACTATCGTGTCATTATTCC
TGAAGAAGACCGGAAATCCAGTGGGCCATTGGATGAGTGTATATCCATGC
GTAATGACTATAACGTATCCGACGGAAGTATCTTTTTCCCCCACATCAGC
CTGTTCACTACGTGGAGATGAACTGGAACAAGGAGGAGTGGACGGGCGGG
GGGTACACGTCATTCGTCCCGCCGGGCGTCCTCACCACATGCGGCAGGTG
AAACATCCGCCCTGACATGATATCTTATCAATCAAACTTTCTATTTAAGA
CACTTCAAACAAGAACTGTACACGGCTAACATAAGCATTTTGTAAACAAT
TAACGCAAAATATTCGCTTGTCTGTATGCTTATCTATCACGCTGATTTTA
ATATTTGTATTATGTCTATTTTTGGTTTAAAATATCTATTACATTACCTT
TATCGTTAACAGTAGTATATTGTGATATCAAAACATCAATTCAGCCTTCG
GGCTGCGACTGTAATGATACGAAGGTGTGGTCTCAATAAAACCATCGCTA
AATATTCAAGAATCCAAAACTGCTAACTAGTTAGCAAATATAACTGTCAC
AAGTACAAACGACCGCGCTGATTTTTCCAGGGAGTTGAGGACTCCGTTTG
GGAGGATATTCTTCGCCGGTACGGAGACTGCAGTAGGCTGGTCAGGCTAC
ATGGAGGGGGCGATACAGGCGGGGGAGAGAGCTGCTGCTGAAGTAAGTGG
GACTTGCTAAACAATATTTATGTATGTGATAATACTTTACGTTTGGGACC
GCATTGTTAGCAGCGACGCCTAGCTGTAATGCAAAGTTACCATTGCCAGT
TATCATTACAATGAAGAAGATGACAGATAATTTCCTTGCTGTGAATAAAG
AAAATTGCTATTCAGTAAGTAGGGATATTTAAAAAAAGGTACGATGTTGC
ACTGGTGTAAGGTTGTACTGTATCACAGTTGAGGTCTAGATAGTTTTCCG
TATTTGACGGTTGATTTATAACGTTATAGTATAAACGGAACGGCGTTCTG
CTGTGCCATTCTCGGGCATATAGAGATCTCTCTTTCGTGGTCAGCTGACC
GTCTAGTGCCATATACGTTATCAGCATGGTCATTGATTTACAGTAAGCAA
TAAACACTGAAAGTTCAACAAAGTGAAAGATTAACTTATAAATGGGCTTT
ATAAAGCTCTGTTAGTACAACAGCATGATCAATGGCTGACATGTCCAACA
ACGAAGGTCCCCTATGTTGCAGATCCTTTGTCAGATGGGGAGGCTTGAGC
CGTCTGAAGTCTGGACCGCAGAACCAGAGAACGAGGTGAAAAGAGATGAC
ATGAACACTTAGAGGCCTAAGAAAACGTGGTAAATTGTGTAGAATAATAT
GGACGCTTAAGTTAGGAAGTCTATTTAGGACGCTCACGTTAAACAATTAT
GTCTTAGGAAAGGGAAGTCGTTTAGAATTCTGATCATCGAGATTTTGATG
TACTGCATTCCACATTATCATAAGAGGAAACAGAACGTCTTGATTGTGTA
CAATCTCTTATAAGATGAGTGAAAAAATTCCCAACCCATTTTCAAGATGA
AACGGCTATTAAAAGTAAGTTTATAAGTTTGCCTGCAACCGGTTTCTTTC
CTCATCAATATACTATTCTAGAGCATTGGTATGTACATGATTCTATTAAT
TATTTCTACTGTTAGTCATAGATCATATTAGTTGCTTGTTTGTTAACCAT
TACTTTAGCAATAGTTGCACGTAACTCTCATGCACGTAAGTTGCCATACA
TTGTACAGTACCAGTTACAATTGTCGCGCAATGAAGTTCTTCTTCTTTTC
TTCTTCAATCGCAGGACTGCATAGCTCTCCCGTTTGAGAGCTCGCTGATG
GAGAGGTACCTCCCGTCTGTTCCGGGCCTGCTGAAGATCATTGCGGGCGG
GTCTCTGTTGAGCGTCACGGCGCTCGGTCTGCTCTGGAAGTTCCGCCACC
GCCCAGACAGCGCCACAGTCGCTCTCCACCACTCTTACCAGTTGCTCCGC
TCTGCAGCGCCACCCTTGAAAGCAATTGCTTCCGGAATTGCAGGCTCGGC
CAGGAAGGGTTTCCCGAGTATTGCCGTGTTTACCTACGTGTACCACTGTG
ACTATAGGCAGCGTGTGCGAATGGCAAGAAGAGCAAGGATCGTAGACAAT
TGGCAAGCGGAGAAGAACAGGAATTCGGCCAAAAAGGCACCGCGAAGCGT
GAGGGTATGGAAAAGGGCTGGTTCAAGAAGATAAGGAACCAATCTTAAGA
CAAAACTTAACTTTTGATCCAAACTTACACAAAAATGTTAGAGATATGGT
CAATAGTATTTATTAGTTGTATCTGATTTTCAAATGATTTTGAATTTCTT
TTGCCTAGCCTCTGTGTAAATACTAAGTACTAGTACTGAAAAGAGTTGGT
TGGTTGTTCTTCAAATTGCTTCGTTTATGGAGGGGAAAGCTAGAAAACTT
TTACAAAGATTATTATCATTTTTGCTTGTTAGGAGCTATAATTGCTTTTG
TTTTTCCTTTTTTTTCTGTTACATACATGTACATTCAGTATTTTCTTCCG
GTCTTAAACTTTGGGACAGCAAGACGTTTCAAACATGTAGGGACTGCACA
AAATATGTTTACAACTATGGTGTTTGTAATGAATGTAGATACAGGCTAAA
AAGAAGTGACACTCAGTTGCATGTTTTCTCCAAGTAGCAGTAAAGACAAA
CTATGAATGTCATCTCTTTGTACAGTCAAGTTATCATATTTTTCATTAAA
CTTCAACTCATGCTGTCTGTGTAACAGAGTTATCAAATGCATGTTTCAAA
GAAT Coding sequence (CDS) from alignment at Sc0000049:1772211..1781014- >BlTCONS00062564 ID=BlTCONS00062564|Name=BlTCONS00062564|organism=Branchiostoma lanceolatum|type=CDS|length=675bp|location=Sequence derived from alignment at Sc0000049:1772211..1781014- (Branchiostoma lanceolatum)
ATGAACTGGAACAAGGAGGAGTGGACGGGCGGGGGGTACACGTCATTCGT
CCCGCCGGGCGTCCTCACCACATGCGGCAGGGAGTTGAGGACTCCGTTTG
GGAGGATATTCTTCGCCGGTACGGAGACTGCAGTAGGCTGGTCAGGCTAC
ATGGAGGGGGCGATACAGGCGGGGGAGAGAGCTGCTGCTGAAATCCTTTG
TCAGATGGGGAGGCTTGAGCCGTCTGAAGTCTGGACCGCAGAACCAGAGA
ACGAGGACTGCATAGCTCTCCCGTTTGAGAGCTCGCTGATGGAGAGGTAC
CTCCCGTCTGTTCCGGGCCTGCTGAAGATCATTGCGGGCGGGTCTCTGTT
GAGCGTCACGGCGCTCGGTCTGCTCTGGAAGTTCCGCCACCGCCCAGACA
GCGCCACAGTCGCTCTCCACCACTCTTACCAGTTGCTCCGCTCTGCAGCG
CCACCCTTGAAAGCAATTGCTTCCGGAATTGCAGGCTCGGCCAGGAAGGG
TTTCCCGAGTATTGCCGTGTTTACCTACGTGTACCACTGTGACTATAGGC
AGCGTGTGCGAATGGCAAGAAGAGCAAGGATCGTAGACAATTGGCAAGCG
GAGAAGAACAGGAATTCGGCCAAAAAGGCACCGCGAAGCGTGAGGGTATG
GAAAAGGGCTGGTTCAAGAAGATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00062564-exon-Sc0000049-1564993656:1776581..1781014 | BlTCONS00062564-exon-Sc0000049-1564993656:1776581..1781014 | Branchiostoma lanceolatum | exon |
| BlTCONS00062564-exon-Sc0000049-1564993656:1776307..1776395 | BlTCONS00062564-exon-Sc0000049-1564993656:1776307..1776395 | Branchiostoma lanceolatum | exon |
| BlTCONS00062564-exon-Sc0000049-1564993656:1776042..1776201 | BlTCONS00062564-exon-Sc0000049-1564993656:1776042..1776201 | Branchiostoma lanceolatum | exon |
| BlTCONS00062564-exon-Sc0000049-1564993656:1775664..1775760 | BlTCONS00062564-exon-Sc0000049-1564993656:1775664..1775760 | Branchiostoma lanceolatum | exon |
| BlTCONS00062564-exon-Sc0000049-1564993656:1775403..1775456 | BlTCONS00062564-exon-Sc0000049-1564993656:1775403..1775456 | Branchiostoma lanceolatum | exon |
| BlTCONS00062564-exon-Sc0000049-1564993656:1774818..1774915 | BlTCONS00062564-exon-Sc0000049-1564993656:1774818..1774915 | Branchiostoma lanceolatum | exon |
| BlTCONS00062564-exon-Sc0000049-1564993656:1774323..1774434 | BlTCONS00062564-exon-Sc0000049-1564993656:1774323..1774434 | Branchiostoma lanceolatum | exon |
| BlTCONS00062564-exon-Sc0000049-1564993656:1773730..1773792 | BlTCONS00062564-exon-Sc0000049-1564993656:1773730..1773792 | Branchiostoma lanceolatum | exon |
| BlTCONS00062564-exon-Sc0000049-1564993656:1772211..1773200 | BlTCONS00062564-exon-Sc0000049-1564993656:1772211..1773200 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000049 | genome | Sc0000049:1772211..1781014 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030760 |
|
