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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000049:1676681..1684943- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00062544 ID=BlTCONS00062544|Name=BlTCONS00062544|organism=Branchiostoma lanceolatum|type=mRNA|length=8263bp|location=Sequence derived from alignment at Sc0000049:1676681..1684943- (Branchiostoma lanceolatum)
CTCGGTCCCAGTCGTGTCTGGTCGGAGGTTGTGTGAACGCCAGAGTCTCC
GACAATCCACGAAGAATCCTCGGATCTCGACTCTTACAACGTGAGTAAAC
ATTATTTTTCATATTTGCGGATATGCCACATGTTCTTAAGAATACAGGTG
GAAGTACAAGGGTCAGGGAGTGAAAGTTTTAACGCTTTTGATGTGTAAAG
AATGTTGAAGCCGGTATCGGTACAAACAATCCCAAGCATAATTTACTGTG
ATTAGTACTACGTCTAACGCCAAGTGTTTTGAAACTCCACAATTACCCAT
AGCAAAGTATTAGAAAAAGCTTTAGAGGCAGTTGAATGGTCTAATCTATT
CGTTTTCGTGCGCTTCTAGTTAAAGTAGTGTAGAAATTTAAAAGGGACCG
ACCCCTTTGTTTGTATCCAGACAGCTGTCACAACAAGTCTGCACAATATT
GTTGATGAGATTCTAAATTATATGATGTACGCTGCCACTGGTTGCAGATG
ATTTTCAGACGACAATGTTGATCGTCATCTAGACATTATTGTCGGTTGAT
CACAGAGCTCGCATTTTGCAGCTTTTTTATGCAATACAAACGGTTTCTTG
ATTTATAAACAACAGTCTATGATGTATCATAATTTTAAGGTTGTATACAA
AACACAAATACATGTTTGTACAATGTATGTAGCTACATTTATGTAGCCAA
AAAACAAAGCTAGACATCGTAAAACCTGGTTTATAAGGGTCACAAACAAA
GGGTCTGAGAATCACAGACTCAGTGTCAAATGTCAAATAACTTTAGACAC
CAGAGAGATACAAATGGTTCGGAAATTTGAGGCATGAACGTAATTCAGAA
GTGCATGTTTTTGTATGTACTATATGTACTTCTGCGATGTTGATTTAAAC
AAATAAAGCTTTGAGAAAGATTTGAAGATCTGAAATATATAGATACTACC
TGTTGTTACCTTGACGTTTAAACTATGTCTCCTCGACACTTATCTCTCTT
TGACGGTAGTCCATGATCCAGATTGAGACCATGTGACTAAGGCTTTGATT
GTTTGATATTTCCCAGGCACAAGGTCCCTTAGGATGTAGAGATGTTCAGA
TAAAAGTGCAAAGGAACTCAAAATCTTGCATTATACTATCCCTATAATCT
ACCACCGAACTATCAAACGTTTAGATGGATTTCAGGGCGTGCAATATTCA
ATCTTAATCACGACGAGACTACTAGTTTGCCAACTGCCGGAGTCATACAT
CCTAAAGTACTTCATGACTCAGAACCTCCTTTGTGCTAAAAAAATTCTTT
AAAGTCGTAAAAAGATTCTGCATAACTCCTAATGTGTTCCTGTTGCACTT
AAAGATGATTATCTTATCTATATGGGTATAGACAGTCCTCATAGAGACTG
TAGCAGTATACAGATCTTGTGATCCCCGATTTAGCAAACTTGGAAAATAC
AATACAGATCATTCAAGGCGGTTGGCGTATGATGGCGATTATAGCCTGCG
TTGTCCTTGGTAGCTTATGACCTTCAACAGGCCCAATGTCCTTTACGATA
AGGTCTAATTGATATACGTATTTGACATTCCAAGCGTAACACTATTCTTC
GCACACCTGTTGATGATAGTCATCTTTGACTTAACTACAACATTTCGTCG
CAGTTTCAATCAAATCACATTGGTCGGCGTCTATTTGAAGTTTTTCAACT
TGACAAAGTTAAGTATAGAAATTGGTAGGATTGGCTCTGTGAGATACATC
AGGAGACAGTTAATACAGTTCGTCTTTGATCCGTCGAGGTCATGTGAAAA
TGATGCGCATCGTAACTGTCAATTGTGGCGCATCCTCGGGGGACGTTCGA
CCGCCCTATCCTTGAGTAGATATTGAACAAAACATGGTGTCAGAAGGTCA
AACCACACTGAACAGGTCTAGACAAATCCTCGGTCGGAACGACTTATCGA
TGTTTTCTGCTCAATGGACTGTACTATTATAAGCACAGACAGTGCTTTAA
TCGCTTTGAGGACAATGTAGGCTTCCGGACTTGGTTTCCTCGTTTGTCTA
AATGTCTGGGGGGAAAAAATCAACATTCCAACTAGAACGAGGGTAAACGT
TTCCTGAAATAATTTCAGCAATTGGAGACTGACAAAGACAACATTTTCCT
TGATTTATTTACATGATGCGGTCAAGATGGCATAAATGTGACATAATCAA
AAATGACATGTGGGTTTTTCAATTTGATGAATCACAATGATATTGTTATT
ATCTATATCATCCTAATTATATCCTTAACATAGTTGCAGTAATGTCTTAC
TTAGGGTAACAAGGCCCGAAGGACATTCGATATTAAGGGTTATATGATAA
TCAATGACGATATTATCATGACAATTATACAATGATGATAACTTGCGACT
GTAATTCATTATAGTGCATTTAGGATAAAGTGATATATACAAATAGCAAA
TTTAAAATTCATAGTGAAAAAGATATTCACCTTGTTTTTCAGGATCCTGC
CACGATGGGACTGCATGTCACTAGTCTCGTACTGGTAGTTTTTGTAGCTG
TCCAGTTGGAAGTAAGTATGTGGATCCATTATTAGAGCTACTTCATTGGA
ACTGAATGAAAATGAGATATCTATCAGTGCTGCTGTAGTTTTACTGCACG
CTTGCAGCCATCATTTCGACTTTTGACACACTCTTCCGAGTGACATGTTT
TATTTGATCAATATCTTCATGTATTGCATTGTTCTTTCATTATATCGTTG
GGTTCTTCAACCTTGTTTACAGATTGTACTTTTTTATTCGTTTAGGGCAT
TCGTGGATTAGACTTTAAATGTAAGTGCGCTAATACTTACGATTTACAAT
TCATCATGATATATTGGGGATAAATGGTGAATATTTTTATACAGTCAATT
CATTTGATTAACGTATTACCAATATTTTGTGGTATAAGAACGTAAGACGT
TCAGCACACATAGACAGCTGGAATTTCTCTTCATTTCTTTCTTTCTCCTT
TTCTCCCTCTTACTGATCAATTGTCACCACGTAACAATATCTGAAGGCCA
CTTCAAGGTTACGGATTACATGGATAGGACTGGAACAGCATCTCTTCTCC
CTAAGTCAGGAATATCATGATTGAGCACGAGACAAACTTGTCGCATGATT
GTACATGTAACCGTTACGTTACCACGAACAAACATTCTGTTTGGACAAGG
GCTTACAATGAGTCTGTGCCAGGTGGCACGTTACGTTTTCGAGGCATTGG
CATAGTCGTGGGGCACTGCATAGTGTGTCAGTTCAAGGAGGTCCATCCGT
TTTAAACCTCCTTGGTCAGTTGTAGGTCCTGTGTTACTTGATAGCGATGA
CATTTCGTGTTCGGAGGCATGACCTTCAGCATTAACGATGTAAATTCATC
ATGTACTCTGTCTCATGAGCATCTCGTCTGTCCTTTAATCTGACTATTTG
ACCGTTGGGGCACCACAGAACATCTGACAATCCGCTTTTTTCACTCTTCT
CGGCTTTTGATTCTTCTTAAAGTTTCACTTATTGTCATGTCAGTCCATTT
TCTCCTATCAACCTCCAACCTTTTCCGTTGTCTACCTCTCTTTCTTCCTC
CCTGGACGGTTCTTTGAATGCTAAGATTTGGCTAGTCCCGATGACCGTGA
CACGTGGCCATGCATTAATTGTGTACAGTAGCCTGTTATTCGTTGATTCT
TGATAAGTTGGTGGTGCCTCACCTAACAGCCCTATTTGAGTACAGTAGAT
GACGTAAATGTGCTTTGATTTCCTACTTTCAACACCTGTAATTCTTCTGT
GTTCAGCCATTCGGGCGTCCGTGAAGCTGAGCGATGTCGACTGCTACACT
GGAAGTGGAGAGAACTACCGAGGAACTGTGGGAGTGACGGAAACTAACGA
ACCCTGCCTGGCCTGGAATTCTATTGACATAGTCAAATTCCGCGCCATAA
GCACCAAATCGTGAGTCAAAACAGGATGATATCAGATTAAAATGATACTA
TTGATGAACAATTTTCCCTATCTGCAACGAAACAATACATACATACTGGG
TAGCATTCTTCTATACTCTTTGAATAAGATTGCAGTTTTATTTAATTTTT
GTGTGTTTTTAAGATACCATATGCAATTTACACCAGACGCTACCTTTCTG
GGACATTGGTTTATATATCAATTACGCATAAAGAGGACAAATGTTCAAGT
GGAGAAATATTGCAATGATCTGCCATAAAAATACAACCAACATTACAAGG
GACGCTGCTCTTTTACTACTGATTTGGTATTTGTTATCAGTAATCAGTGT
TGTAAATTAAAGTTGCTAAATTGATTATAATCTTTATCATTATCTTGCGA
GACTGATGAATGCCTACTACTGATATCATTGTCTAACTCTTCCAGAGTTT
CTGCTGGGAAGTACAACGTAGGCAACCACAACTTCTGCCGTAACCCCATC
CCGGGCACAGTGTCCCGCCCATGGTGTTACGTGGCCTCCCGGAACGACTG
GGCTTTCTGTCCCGTCTCCAAGTGCACTGGTAAGGGCATGGTCACATTCG
CCGCATGATCGTCTTACGATTGTATTCATGGAATAATCGTGCACATGTCG
CACAACATTTAGCTGTCTTGATACGGAAAAGGCTGTCGAAGATCCTTTTT
GCAGTGGTTGGTTCTGTAGCCTAATATCTTTGGAAAAATAGTAGAAATTC
GCCAAATAGACCGATAACATTTTGCGACCTGTCTATTTGGCGAATTTCTA
CTATTTTTCCAGCGACCTGTGAAGCCTGGTAGAGGCTATTGGTTCTGTGA
CTTCTGTCACAGTCTGCTTGAAATTTCTATCGCGTCACGGATCGCTAAAT
CTATGAGATACGCTCTCGCGTGATTTCACCTTAGTTTCAGGTATAGACTG
TAGTAATATACCCCCCGTCCTCAATCTGTCAGCTTCCGCTTCCGGTATTA
CCGGCGGCGGCCAGTCCCAGAGGGTCAGTCCCGCCGTGACGTGCCCAGCC
ATAACAGCGCCCCCTACCGCCGTGACCGGATGTGCAAAGAGCAAGGTCTT
CCCTGTGGGCCATAAGTGCTGGGTGCTGTGTCCGACCGGGCAGAAGATCA
TGACCACAGAGTGCCAGTCTACTGGCAAGTGGAGCGTGGACCTCTCTAAA
ATTACTTGCTCGGGTGAGCAACCGTCTTTTGTTTGAATTATTTCTTTTTA
GCTTTGTCTCTGTATTATCCTACATTGTATGTTGACCCTGACATACAAGT
TACAATGTGTACAAATTTAAAATGTGATTGACTGCCGGTACTTGATGTGA
TGCTCATACATCCATTACTTATAATTTCTCACGAAGCAGCTAACATGAAG
AAAGACTACGTAATTGTGTGTCTTGTTCTGACAGTTTTCATACGAAGTAA
ATGTAAAAGGCCCATTAAGGTAGATCCCTTCATAATTTCTCTTCCTTTTT
GCCTTCTAGCTAACGCTGCATCCCAAACTGGAGGCGGAAGTACCGGAGGG
AGTGGTAGCACTGGTGGGATCGGGCCGCTGGACAAGGTGTGCCCGGCGCT
GAACGTCCCCACCGGCGGCTTCTCGAACTGCAAAGGGCCGCAGCGCATCG
GGGCGACCTGCGGGGTCGGGTGCCTGGGCGCCGTCACCATCGGGGTGGAG
TACATCAAGACCACCTGCATGTCGGACATGAAGTGGACGAAGCCAACTGA
GTTCACCGCTACCAAGACCAAACTTGGATGTGCAGGTATGGACGCAAATC
AAATCACTTTCATTTTTCTTTGGTTCGTTTGCCGAACAGCTAACGATTCC
CGAGCAACCAAAGACTATCTAACATAAGGTATCTTAACATTTGGGCATGC
GCATTAACGAATCTCGCCCTTTATCGCGAGAAGTGCTCTGAGAACTTTAT
CCAAAATGGCGACGTGTCCGACAAATTTTGGGATATTTCGCGGGCCTTGA
ACGTCGCTTTATGGACCAAATAAAGCATCAATTGTACATGGATGTGGTGG
ATAATTGGCTATCAGGTCTCTCAACCAAAACCACCGCTTTATTGACACGA
TTCCTCCTTCCCCTCCCCCTTCCCCAGGAGCTCCAGTCATCCCGCCAAAC
GCCCTGCATGTGCCCGGTGGAACTACTGGTGGCACCACCGGCGGAGGGCA
GGGAGGTACGAGCACGGCCTGTTACAAGGTCAGCGACAAGGGCAAGTCGT
ACCGCGGGACCCAGGCCAAAACCGCCAAGGACGCCAGCGGGAACCAGTAC
GACTGTCTGAAGTGGGACGCACCGGAACTGAAGTAAGTCAAACACGTATA
GGTAGTACTAATCCTGTTAATTGTATGTTTGTTGTATATTTTGCCTGACC
CTTATACCTCTTCCATTATGACCTACATGAAAAGCGGCCTGCAGGCCTAC
TTGAGCTTCTCATGAATAAACGAAGGCTCAAACAGTTGGCTATACAGGCC
TTTTATTTGGCGCCATGTTGGATTACATTGCTGCTTAATCCAAGTACCCG
CCAAAATGGTCGCCTGGGCTTTCAAATCCAAATATACAGTCTCTACCACT
CGAATCTGCTTTCAAGCGTATATGAATTTTCTTGCGTGAGATATCAAACA
TGATCTTAAGAAATGTGTTGTTTTAGTATGTTTTGTTTGTGGGTTTGGCT
GCAGCATATGTAACAAATATTAACAGATATCACAAGATCTGGTTTGGTCA
AAGCATGGTAAAATGATGAGGTAGATTTACGTGACAGGACATTGAGACCA
GTGTACTAAGCTCCCTGCAATCCAAGTATGTACTCAGTGTGCAATCGAAG
AATTTTTGATAAAACTCACTTATTTTTTTCTTTGTCTGTTTAGGTATTAC
TTCTACAACATCGCCAACTTTCCGAACAACAAGGATGGAATCGGTAAACA
CAACTACTGCCGTAACCCCGCCCCTGAACTCGAGCCCTGGTGCTACTACA
AGTACCAGAACAAGGTTCAGTTCATGGCCTGTGGGGTGCCGAAATGCCCC
TAGAAAAAGTAAAGTTCACTGAGAAGTGAATCGCAGGATTTGCTACGAAA
GTGAACTTTTTGAAAGAGTCCAAAAAGTTACCACCTTTTTAATCGGATCT
TTCAATTTGGAGTGATAAGATTTTAACAACTACGTTTTGCAGATAATTTC
TTATATCCTCAGCAAATATCTAATCTTTGCCATAGATGGGTGGCAATTCC
CTTTATAATCAAGTTTATGACAACATGTTATGTACCTACCTCTCCCACTG
ACCATCAGGGTGCTATGATGATACTTTTGTGAACAGTTGAACGTTGACAG
TTTTTTTGTTCATTCTTATTACCAAAACACTTTAAATGTCTTTTAACTTA
ATTTTATTGTTAGTACCTATATTTGGCGACTTCTGAGGCAAATAATGCAT
AGATCCAGAGAGGTGGCCAAGTATTTTCGGTAATAGCACAGATATACAAT
TTACTGCTTGGCCAAAGACCGTCACACACACACAGAGACACACACACACA
TATAAATACATACACACGCACACACACACACGCCTCCAATTGTCTATGGA
CACAGACACCTTGCTTTCTGATTATGCTATTATTGCATTGTTGAGGTTCT
AGTGATATATAATCTAGACTTTTAAACGCATAAGTAGCTTGTAACAGCCT
ACGGTTTGTTAAGCAGCCCTTCATAGTCAGTAGATAACTTATCTTATCTC
TCTCTGTAGTTCAAATGAAGAGAAACCAAGCTATGTATAATCTAATCGAT
TTCTATTTCAATTTAACTTTTAAGTTAAGGATACATAAGTTAAAACAATA
AAATATTATGCATGCCTCAGTTTTTGAGACTTAGTTTCCTTTCTTAGTCA
ATTTGTTTACTTTCTCGTTTGTTGGTGCTTATTCATTCTATCTTATCATA
ATCAATGTACTATTTGTCCGGAAACTCAAGTCTGCATTGCAGTCAATCAA
ATATCTTCAATTACAGTTCAGATATTCAGTGAATTGAGCTACTATACATG
ATGGAAAATATCAAGGTACGTACAATCATAGATAGCACTACACGTGACTG
CGATTAGATGAAACTGTAAAAGTATGACGACTTTGTAGTACATATCATAC
ACGACAAAGCAATGCAACATAATAATGACAGAAATACCAGATTCTGAATC
ATTATACCTTCAGTACTTTATTCGTCAATACAACAAAATAGTTGACACGT
CGATAGGAATTTTTGCAGAATGTTTTCATGCATTATCTCTAACTATCCTC
AATTGTGCTTGGT Coding sequence (CDS) from alignment at Sc0000049:1676681..1684943- >BlTCONS00062544 ID=BlTCONS00062544|Name=BlTCONS00062544|organism=Branchiostoma lanceolatum|type=CDS|length=1242bp|location=Sequence derived from alignment at Sc0000049:1676681..1684943- (Branchiostoma lanceolatum)
ATGGGACTGCATGTCACTAGTCTCGTACTGGTAGTTTTTGTAGCTGTCCA
GTTGGAAGGCATTCGTGGATTAGACTTTAAATCCATTCGGGCGTCCGTGA
AGCTGAGCGATGTCGACTGCTACACTGGAAGTGGAGAGAACTACCGAGGA
ACTGTGGGAGTGACGGAAACTAACGAACCCTGCCTGGCCTGGAATTCTAT
TGACATAGTCAAATTCCGCGCCATAAGCACCAAATCAGTTTCTGCTGGGA
AGTACAACGTAGGCAACCACAACTTCTGCCGTAACCCCATCCCGGGCACA
GTGTCCCGCCCATGGTGTTACGTGGCCTCCCGGAACGACTGGGCTTTCTG
TCCCGTCTCCAAGTGCACTGCTTCCGCTTCCGGTATTACCGGCGGCGGCC
AGTCCCAGAGGGTCAGTCCCGCCGTGACGTGCCCAGCCATAACAGCGCCC
CCTACCGCCGTGACCGGATGTGCAAAGAGCAAGGTCTTCCCTGTGGGCCA
TAAGTGCTGGGTGCTGTGTCCGACCGGGCAGAAGATCATGACCACAGAGT
GCCAGTCTACTGGCAAGTGGAGCGTGGACCTCTCTAAAATTACTTGCTCG
GCTAACGCTGCATCCCAAACTGGAGGCGGAAGTACCGGAGGGAGTGGTAG
CACTGGTGGGATCGGGCCGCTGGACAAGGTGTGCCCGGCGCTGAACGTCC
CCACCGGCGGCTTCTCGAACTGCAAAGGGCCGCAGCGCATCGGGGCGACC
TGCGGGGTCGGGTGCCTGGGCGCCGTCACCATCGGGGTGGAGTACATCAA
GACCACCTGCATGTCGGACATGAAGTGGACGAAGCCAACTGAGTTCACCG
CTACCAAGACCAAACTTGGATGTGCAGGAGCTCCAGTCATCCCGCCAAAC
GCCCTGCATGTGCCCGGTGGAACTACTGGTGGCACCACCGGCGGAGGGCA
GGGAGGTACGAGCACGGCCTGTTACAAGGTCAGCGACAAGGGCAAGTCGT
ACCGCGGGACCCAGGCCAAAACCGCCAAGGACGCCAGCGGGAACCAGTAC
GACTGTCTGAAGTGGGACGCACCGGAACTGAAGTATTACTTCTACAACAT
CGCCAACTTTCCGAACAACAAGGATGGAATCGGTAAACACAACTACTGCC
GTAACCCCGCCCCTGAACTCGAGCCCTGGTGCTACTACAAGTACCAGAAC
AAGGTTCAGTTCATGGCCTGTGGGGTGCCGAAATGCCCCTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00062544-exon-Sc0000049-1564993656:1684854..1684943 | BlTCONS00062544-exon-Sc0000049-1564993656:1684854..1684943 | Branchiostoma lanceolatum | exon |
| BlTCONS00062544-exon-Sc0000049-1564993656:1682383..1682451 | BlTCONS00062544-exon-Sc0000049-1564993656:1682383..1682451 | Branchiostoma lanceolatum | exon |
| BlTCONS00062544-exon-Sc0000049-1564993656:1682124..1682148 | BlTCONS00062544-exon-Sc0000049-1564993656:1682124..1682148 | Branchiostoma lanceolatum | exon |
| BlTCONS00062544-exon-Sc0000049-1564993656:1680984..1681137 | BlTCONS00062544-exon-Sc0000049-1564993656:1680984..1681137 | Branchiostoma lanceolatum | exon |
| BlTCONS00062544-exon-Sc0000049-1564993656:1680415..1680548 | BlTCONS00062544-exon-Sc0000049-1564993656:1680415..1680548 | Branchiostoma lanceolatum | exon |
| BlTCONS00062544-exon-Sc0000049-1564993656:1679781..1680011 | BlTCONS00062544-exon-Sc0000049-1564993656:1679781..1680011 | Branchiostoma lanceolatum | exon |
| BlTCONS00062544-exon-Sc0000049-1564993656:1679209..1679484 | BlTCONS00062544-exon-Sc0000049-1564993656:1679209..1679484 | Branchiostoma lanceolatum | exon |
| BlTCONS00062544-exon-Sc0000049-1564993656:1678662..1678866 | BlTCONS00062544-exon-Sc0000049-1564993656:1678662..1678866 | Branchiostoma lanceolatum | exon |
| BlTCONS00062544-exon-Sc0000049-1564993656:1676681..1678100 | BlTCONS00062544-exon-Sc0000049-1564993656:1676681..1678100 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000049 | genome | Sc0000049:1676681..1684943 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030746 |
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