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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000049:1661571..1669863- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00062542 ID=BlTCONS00062542|Name=BlTCONS00062542|organism=Branchiostoma lanceolatum|type=mRNA|length=8293bp|location=Sequence derived from alignment at Sc0000049:1661571..1669863- (Branchiostoma lanceolatum) CGGAGGTGGCTGCATGTCCGTCAACAAATATCTGCATTTCTATGTATTTG
TTTTGCATTTCTACCTTTTGAGGGAGGAGGGTGATATCGGTCAACGATAG
GAGCGCGATCTTAGTCAGGCTGATCATATATATATCAAAGACTGAATCGT
TCTGAGGTCCGCCAGTGTCGACAACTGTTACTACTCTCTGGAAGGTAGAA
TAGAACTGAAGTACTTCCTTGATGCAATTATATTAAGACAGTTACTTGTC
TGTCCACCGTACGTCATATGACCTGGCGATCTTTGTGGGAGGGGTGAGGT
TGCAAAACCGGTTTTTGATTTTTCAGGGTGTGTTGTCATGGTGCTCCAGG
CCATCTTATGGTGAATGGACGGCTCTGATTGGTAGTCTCCCAGAGTGACC
CATAAAGTAACTGACCTCGCACTGAGCAGCGTACTTTCCGTGAGAATCCT
GAGGTCCGCCAGTATCCACAACTCCTCTCCGACAAGCCGGAATACAGGTA
GGTACTTATTCTGATCTTGCTGTTGTTGTTGCATAAATCGAAGATAGAAA
TCATGGAAAGTTGGCCATAGATAGGTTTGATGCGGAAGATTTGTCGTCTT
TTCTCGACTCCATAAGTTGCTGAACAATAGGCCTAAGGCAGATGTGCCAT
TTGTAACGAAATCTATACCAAGTCTTCTGATGAAATATTTCCGACATTTA
GGACAATTTATACTATTTCTTTCAGTCCTGGTGTATTATACTGACGGTTA
TGCTGCTTGACCGATTCAAATTCTGCCGATTCATATGAAGCAAGATTCTG
CTTCAAATGTTGCGTTGTTCCCTCCAGAAGCGGCCCTCATAATAGGCTAT
ATATTTACGTTTTTTAAAGAACAAAGGATGTTGAATGAAACTACTGAAAC
GATGTTATGTTTTAGCTTCTTTCTATCAAAGTTGCGCTTGACCAATCCAT
TCCCACGTTTTAAAACGGAATGTGGTTATCGATATCACGGCGGTACATTT
CATATGAAAATGGGAAATTTAGGTTTTATCGATCTATATGGGTCACAATG
TACATGCTAAACCAATAAATAATTAAAATATAGGTAGCTCCAGCTATCAT
CAGCTCCGGTTATTATGGTGGCCTACAGCTAGGTCAGTTTAATTTGCCTC
CGGCATCGGATGGTCAGTTTCTCAATGGTTAGTTGGAGAGGTAGGTTAAG
TCGCCAGTTATGAACACATTTAACTACATCGTAGTTTGCTGAATTTTGAT
ACGTCTTAGTTGCCCTCTTTTGCAGCTGGACGCACAGAGGACCGCCTATT
TCCCTGGTAATTACATAGACATGTTACTGTGTAATTTCTACCATGTTTTT
CAGTCCTGGTGTGTTGTAATGACGGTTATACCGCTTGACCAATTCAAATC
CAGATTTTGCTTCAAAGGTTTCAAAAATCTTGTTTTATCTCTAGCTACGT
TTTTCTCTCCAGAAGCAGGGCATTTCACACGTCGAACGACGGCCCTCATA
GTAGGCCGTAAGTTGTCTATTCGTGTCTATTCTCAACTCCATAGTAGGCT
ATGGTTGTCTATTGATTGTCTATTCTCAACTCAATAGTAGACCGTTTGTC
GTTTGTTGTCTATTCTCAACTCCATTAGCCTGGAATCCATCCTATTTAGC
TTCCGGCCGCTACCCAAGCTCCGCTGCCTGGCGCCGGAAGCTAAATAGGA
TAGATTCCAGGCTACAACTCCATAGGTTGCTGAAAAAAATAGGTTGAATA
ACTTGCCAAAGGCGTTAGTTGGACAGATTTTCAATTTGTAACCATATACT
ACAATGGCTCTCCACGTCCTCTGATGAAATATCCCCCACCCACCCCCACC
CATTTTGAGCAATTTCTACCATATTTGTCAGTCCTGGTGTGTTACAATGA
CGGTTATGCCGCTTGACCATGTACGTTACAAATTCAAATTCAGGACATTC
AGATACTGCTTCAAATGTTTCAACGGGTCATGCCCAACTGAAATTCTTTG
TTTTTAATTTTTCGATCAGTTGAAGCGGGTCGGTGGGAGTTGACAGAGAG
GGATCAAGATGGCCAACGGCAACACGCCAAGCAAAGTGATCTTCGTCGTG
TTCGGAGTAGTCCTGGGATATACTCTGTCTTTGCTGCACAACTTCGGCAC
CACCGTCGATACCCACCCTACTGTCAGCCACGATGTGCCTGTTCGCTCTT
CTTTAGACGAGTCTCTTCGGTAAGTAAAATCTCAACAGTACTGTGTTGTG
TTGTTTTGTGATGTGTTGTGTTGTGTTATGTTGTGTCACATGTGCTGTGC
TGTATTCTGCTGTGCCAGTTGTGCTGTGTTTTAATATAAATATAGACGAC
TGCGCTTGGCCACCATTAATCATTTTGTTAACGTCCCGATTGTATCTTCG
TAAATTGTTAACCCACTTTTAGATATCGAACCTATACTATAGACATCTAA
GAGTTGGATTGAACAGAAACATTTCTAGCAACTAACGACTTATTGATCGA
TGTAGGCCGCCACAGATACCACTACAGATGCCACAGATACCACTACAGAT
GTCACAGATACCACTACAGAGGGATGGTAGTGTACCGCGACAGGGGGGTG
GTAGTGTACCACTACAGGGGAGTGGTCCACGGAAAATACTTCTGGACTGC
GGAGCTAATGTCGCATCTACTGTGCAGGTAAGAGAACGTTTACTTCTTTA
AAAGAACGTTCTAGGAAACTCACGGTTTGGCTTCGTGATGAAGTAAATAT
GTTGAAGAAAAACAAATATTTCTTCATTCATAAAAGTGGTAAGTGAGAAA
AATCATGTCAAATATGTTCCGTTTCCAAGCAAGCGGCAAATGTTTCACCG
AGAAAAAATCCTTGGTTTCACCCGTTGTTGTTCAAGATACTGTCGAAGTG
AATAGCTTTGTTATTATATAGACACAAATGACTAGATTCAACCAAGGACC
TGATTCAACTCTCATACATCAAATTACATATGAAAAGGGAGAAAGCGTAC
AGGAGGAGTCTCCATGGGAAATGAAACATGACAAAAGATATGACTTGGAA
ATGTTTAAGTTTCTTTCTGTTCCCTTTTGGGACTTGAATTCAGCAGCCTT
AATTTGGTACGCATGATGTTTCACATTATACTGTTACATACCCTCCTAGA
AGATTGACGTACAAGATAAATTACCGTATACAGTGTGTTAATTCAAAATA
CATAAATTCTTGGAACAAAAAAAACAACAACGAAGTACTAGTATTATGGA
AGAACTACAGGTGGTTGGAAATTCAGCTTATATATCTTTAGAGTGATCTT
TGTTATAAGAGGTAAGATATCAAGTATCGAGACTTCTATTGTTCTGGTAC
ACACAGTTATTCCGGGAGACATACCCTGATGGAAAAGATTACATCATCCA
CTCGTTTGAACTGGACGCGAGGCTGGCGCCCTACTTCGCATCCTACTCCA
ACCACGTCCTGCACTGCCCAGTCGCCGTGGCGGGGGAAGATGGTCAGTCA
TGCCACCCTTAACACTTTTCTACAGGTTTAGTTTAGGAATGGATGTATCT
TCTTCCTACTGCTTAACCCTGTAACCAATAGATATTTTGTGTCAAACAGC
TACTGCAGTAGGGATAAGGTTTAAGGCTTATACTAATAAGCTTGTACATT
TGCCTGTAATGCTCTGTAAATATACTTTCCTTGTATTATCACATTGTAGT
AAGGTGTTCTCTCTTTTTGTATCATTAGTTGTTTACTTAATGTTGTGTTG
ATATATATGCATATGTCTATGACTATGTTTAGTTTCACTTAAGTGTAGTT
TCATTTTGAATTGATATTTTCATTATGTAATACAGTGTACATATTACTCA
ATTTGTTTATTTGATTTTTCGCTATAATCTTAGTTACCTGGGTGGCTAAC
ATATAAGCTTGCAAGCTTTCGACCCCCCTCGCACATTTGTATTAAGATTT
CTTATTGTTTTCACTTGTGTCTTTGACAATTAATCAATCAACTCACTTTT
CAAAACGAGGGCTATATTTCTGTGTGATTTTATCAGCCTAGGCGTGTAGA
ACGTTGACATATAGAATAGTTCAAAGTTGAAACGTGAAATAAACGCACGA
ATTTCCTTATCAGGAAATATCACGGCCTACGCCGAGTCAGCCTGGAAACC
GGACAAGGGTGCAGTCGCTGGCAAGGACATGCAGTGGGGAGGGGGGGCCA
TCTACGCCTCGGAATCAGAGAAGCAGGGCGAAATTCACGGCCGACGATTC
GGTGTACGAAACGTCATACCAATGGTGGATCTGTCCACGTGGATACAAGA
GAACACAGGTATGTTATAAATTATATATATATATATATATATATATATAT
ATATAGAGAGAGAGAGAGAGTTCAGGCACCACATGTAGCGCGACACATAC
CTTTCCTCGGATGTTCTCTAATCATTTGGTAACTGCTATTTCAGCCATAT
GTCAATACGGTTGTCAATACAGTCGATAAGGCGATAGGTAAAACTGACAT
ATGTTTGCTTGTAGTTAGCATGGTCACTTCAAATTAGTTTATAATTTTAG
TCATTGCCATTTAATCATACAAAGTTGCTATCGTCCGTACCCTGTGACGA
AGGGTATCACCAATGTTTTCTCCTGAGAGCCGTTGTAGCCATTGAATTTC
ATCAGGGGCTTCAAGTACATCTACCTTACATGCGGTTTCATACTAAACTC
TTTTTTGACATGTCCAGCCTTGGAAGACTACGTCATCTTCAAACTTGACG
TCGAGGGAGCAGAGTACGACATCCTGGAGAAGATGGTCAAAGAAGGGACC
TTCAAGTGGATAGACAAGTGCGTGCATTGCTCCTCTATATGGCTTTCACT
TAGAGCTTAGTATATATTAAGTCGACTCTACTGGACTAGCTTAGTTTGAT
AACACGTTTGCTTACTCTATATGTTTACAGCTTGTACTGTTGTATTTATG
TCCTTGTATGTTCCATGTGTTAAATTAGACGACCTGTACCTAGCCCATCG
GGGCATGAATGCATAATGAGGGTCTTTCATTCATTCATTAATGTAACAAT
TCTTTACATTTGAAACCGCATCATCTGACCGTTGTTGCTTAACAGTATCT
ACTAATATGTAACAATACTTTACGTCTGGGACTGCGTTGTTAGCAGTAAC
ACCTAGCTTCAGTGCACTGTGAACTAGTCAGTATTGTCCTGGTGAAGATG
ACAGGCAGTCATCGAAACATCAGCTCTTGTGAGTTGTAAAATACTTGGTT
GTGAATAAAAGAATAGTCTTGCTATTCAACATTTCGAGATGTTAAAAATG
CATCCAATAGACCCCTTTCCAAAGTCCGGCGCCATTTTGAGTCTGGTCTC
GCGAGAGCACATTCTAGTGCGCGCGTGACTTGATGTAAATGTAAACCATG
TATTAAACGTTAAACATTTACAGGTTTTATGGCGAGTTCCACGACTCGTT
CCCTATACCAGGATGGTCAACACAAAGAAAACAAGGTCTTAGGAGTACTT
TGAAGACCAATGGGATCAACATGCTTGACTGGGCAGGAGAGTACAAAAGA
TATGAAGACATGGAAGCCATTCACAAGGTTGACGTAAGTACAGCGGGGAT
GCACATGTAACGCTTTCTGTCCACAACTCGTCATCTAATCATGGGATACT
TGCACATGTAAAAACATATAAACAAATGCATAGATTCCAGACCCTAGGTG
CCTGTAGGCTAACATACAGATATGTTAACGGAAAGGGTTAAAAAATCGTA
TTGAGACGTACATCACTGATAAGAAGGGGTGTCATAGAATGGTTCTCTTG
ATTTTGGCTGTGTCTTATATAACGTTCGAGGGGGGAACATCTACAGATGT
AAAATTGGGGATATATGAAAGTTTCTTGCAAATTTCTGCCCGTAGGCTAA
TTGTACGTACATGTACATGTAACACGGGGTGGACGGACAGACACATGCAA
TGATAAACAATAAACTTCGGTTCTAACTTATTGGGTTCGGCTTCTTTTTC
CGAGACAGTAAAAGACGAATGATCCAACTGTTTCTGTAATATGTGGGTTT
TGTGATGTTAATAGGTGAGTAGTTTTCTTATCGACTGAAAACGTGGAGAA
ATTAGGATTGAAAATGGCGGCCTCTTTAAACAGCTGATGAAGATAATGAA
GATCACCTACTGTCGGTTGTTATAGATCCCAGCTGGTACCCCTGGAACTG
CTGGCGTGGCCTACTCCAGCTGTTCTCCCGGTAGTCCTGCCCGCCTGGCC
CTGACGGTGCAGGTCGGGATGAACAGGAAGGCGGCCCACAAGCTAGTGGA
GACCATCCGGGCGCACCCCAGCAACATGCCGGTCACGCTCTTCGTCTACG
GGGACTTCGTGCAGGACTCCCCGGACCTGATCACCAAGTGGGCCGACAGA
TATACGATAGGAATACGAGAGGTTCGTTGTCTTCCTTTGAGTACGACTAG
TAATTTCCATGTAGAGCTTCCAACAGACTGTATGTACAGTATGCATTCTT
TAGTACGAAGAAAATACATTTGTTATGAAGATCACTTCCATCAGCAGTCT
AAAGAATCATTAGAAAAGTACAGAATGTCAAAAATAGCAGGGCTTACCAT
TTGAAATAAAAACAAATCAACAGCGGATGTCGCTTGAAGACAGAAGGAAA
ATGGCCTGTCTGTACATGATGTACAAAATTACTGGTGGACGTACCTACGA
CGTACCCGAGCAAGCAGCTATAGAACCCATACCTACACCTCTACTTTCTT
ACATCACAAGCTCTCCACCACTATAAGAATTAAGACAAAGACCGGAAGTT
TTGCTGCAGTACCAAGGTCACTTGCAGTACAGAGCCCCAGACTATACTTT
GACTACCAAATAGACGCCACAGTTATAAGACACCATATTTCAGTTTTGGA
GACACAACTATCAAAAAGCTAGTTCAGCTGTGAGGACTTTTTCCCGCGAA
TATTTCACATTTTACAGTACGTCGAAGGGCGGTTATACCAATGTTAGTAC
CATCATTAATTGTTTTGAAATCTCCCCCATAGAATGCGCCCTTTCCAGCA
GACCACTGGGTCCTACAGAACGCCGACGTGATGAGGATGAGTCTGATATC
GGCCGTGCAGCGGATGAAGGAAGTGGGGGTGCGGCCAGCCTATTACTATC
CGGACGGCCTGTCGCAACGGGTTCAGGATACAGCAAAGAGCAGAGGACTG
AGGCTCATTCAGCCGACAACCAAGTTCCCTCCAAACCTTGGTAAGCCGCT
TATTTGTCCATCATTTACTAATTTTACACATAAAACATAAGAAATACAAC
TTAACATACCATCACACAACTTGAAATAACGTAACGTAAAATGATAAGAA
TATATTTGATAAGAAATTTTCCAGAATTGAAAATAAAACCAAATCACGCA
AGAAAACATAAATTTTGGTCGTCGGAGTTAGGTCAAACTATAGCCGATTC
TTAACCTTAGTCTTCTCAATATCTTTCTCTGAATCTGAAATCTAAGTCCA
AACTTTAATCCTTATTTCAGGTACGTTGTTGAGGGAGGATAACTACTATC
GGTTCAGAGACGTGGAGAGGACACCTAAGGCGCTCCGGATCCTGTATGAA
CGCATCTCGAAAGGAGGGATTCTCAGTCTGGACACTGACCACCCAGACAG
CTACATGATCTCAGCTTTCCTCATGGACTACCTGTACGAAAACTCCGGCT
TTCAACTTGTCAATGTGAACGACTGTTTGAACTGATAGAGACGTTTTCCG
AAAAGCATGCACAATATTTCATATTTATTCGATGGACTACAGATGATATT
GTGTTTGAGGTTGAAGATTCCCTCAGTTGCTTCGGTATAGATCTGTGCCA
TTGTTAGTCTTAGAGGTATGATTATCGTTTTGGCAGTAAGAGGTCAATCA
GTCCTAATCTCTCCTGCATGAAAGTAGATATTCGTGATAGAAGCCCTCTA
GTTGACGATTTTGACATTATTTCCCTCACGAGTGAGTTTCGAAGGGCAAG
GGGCTTAGCAAAGCTGACTGGGGGGCGTCATAATGTAAAAGAATAATATA
GTCAAATTCATTACAACACGACCGTCGTAAGAACTGTAAAGTGATAGTCA
TTAGAAACTGTGAAACTGTTTTCCTGACGCATGGCCTCAAAAAGTGTTTT
CAAGCATGTGAAGCAACACTTCTCTTAGAGAACAATAGCCCTTATTGATA
GACTAACAAAAGTAAAGGGTCTTTAAACTAGTTTTATCTCCATGAAAAAA
GGCTTTTTCATGGAGATACTGTTTTGCTTGCAATTGCGTTTGG Coding sequence (CDS) from alignment at Sc0000049:1661571..1669863- >BlTCONS00062542 ID=BlTCONS00062542|Name=BlTCONS00062542|organism=Branchiostoma lanceolatum|type=CDS|length=1593bp|location=Sequence derived from alignment at Sc0000049:1661571..1669863- (Branchiostoma lanceolatum) ATGGCCAACGGCAACACGCCAAGCAAAGTGATCTTCGTCGTGTTCGGAGT AGTCCTGGGATATACTCTGTCTTTGCTGCACAACTTCGGCACCACCGTCG ATACCCACCCTACTGTCAGCCACGATGTGCCTGTTCGCTCTTCTTTAGAC GAGTCTCTTCGGCCGCCACAGATACCACTACAGATGCCACAGATACCACT ACAGATGTCACAGATACCACTACAGAGGGATGGTAGTGTACCGCGACAGG GGGGTGGTAGTGTACCACTACAGGGGAGTGGTCCACGGAAAATACTTCTG GACTGCGGAGCTAATGTCGCATCTACTGTGCAGTTATTCCGGGAGACATA CCCTGATGGAAAAGATTACATCATCCACTCGTTTGAACTGGACGCGAGGC TGGCGCCCTACTTCGCATCCTACTCCAACCACGTCCTGCACTGCCCAGTC GCCGTGGCGGGGGAAGATGGAAATATCACGGCCTACGCCGAGTCAGCCTG GAAACCGGACAAGGGTGCAGTCGCTGGCAAGGACATGCAGTGGGGAGGGG GGGCCATCTACGCCTCGGAATCAGAGAAGCAGGGCGAAATTCACGGCCGA CGATTCGGTGTACGAAACGTCATACCAATGGTGGATCTGTCCACGTGGAT ACAAGAGAACACAGCCTTGGAAGACTACGTCATCTTCAAACTTGACGTCG AGGGAGCAGAGTACGACATCCTGGAGAAGATGGTCAAAGAAGGGACCTTC AAGTGGATAGACAAGTTTTATGGCGAGTTCCACGACTCGTTCCCTATACC AGGATGGTCAACACAAAGAAAACAAGGTCTTAGGAGTACTTTGAAGACCA ATGGGATCAACATGCTTGACTGGGCAGGAGAGTACAAAAGATATGAAGAC ATGGAAGCCATTCACAAGGTTGACATCCCAGCTGGTACCCCTGGAACTGC TGGCGTGGCCTACTCCAGCTGTTCTCCCGGTAGTCCTGCCCGCCTGGCCC TGACGGTGCAGGTCGGGATGAACAGGAAGGCGGCCCACAAGCTAGTGGAG ACCATCCGGGCGCACCCCAGCAACATGCCGGTCACGCTCTTCGTCTACGG GGACTTCGTGCAGGACTCCCCGGACCTGATCACCAAGTGGGCCGACAGAT ATACGATAGGAATACGAGAGAATGCGCCCTTTCCAGCAGACCACTGGGTC CTACAGAACGCCGACGTGATGAGGATGAGTCTGATATCGGCCGTGCAGCG GATGAAGGAAGTGGGGGTGCGGCCAGCCTATTACTATCCGGACGGCCTGT CGCAACGGGTTCAGGATACAGCAAAGAGCAGAGGACTGAGGCTCATTCAG CCGACAACCAAGTTCCCTCCAAACCTTGGTACGTTGTTGAGGGAGGATAA CTACTATCGGTTCAGAGACGTGGAGAGGACACCTAAGGCGCTCCGGATCC TGTATGAACGCATCTCGAAAGGAGGGATTCTCAGTCTGGACACTGACCAC CCAGACAGCTACATGATCTCAGCTTTCCTCATGGACTACCTGTACGAAAA CTCCGGCTTTCAACTTGTCAATGTGAACGACTGTTTGAACTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
| BlTCONS00062542-exon-Sc0000049-1564993656:1669670..1669863 | BlTCONS00062542-exon-Sc0000049-1564993656:1669670..1669863 | Branchiostoma lanceolatum | exon |
| BlTCONS00062542-exon-Sc0000049-1564993656:1669367..1669537 | BlTCONS00062542-exon-Sc0000049-1564993656:1669367..1669537 | Branchiostoma lanceolatum | exon |
| BlTCONS00062542-exon-Sc0000049-1564993656:1667645..1667844 | BlTCONS00062542-exon-Sc0000049-1564993656:1667645..1667844 | Branchiostoma lanceolatum | exon |
| BlTCONS00062542-exon-Sc0000049-1564993656:1667187..1667358 | BlTCONS00062542-exon-Sc0000049-1564993656:1667187..1667358 | Branchiostoma lanceolatum | exon |
| BlTCONS00062542-exon-Sc0000049-1564993656:1666372..1666507 | BlTCONS00062542-exon-Sc0000049-1564993656:1666372..1666507 | Branchiostoma lanceolatum | exon |
| BlTCONS00062542-exon-Sc0000049-1564993656:1665556..1665750 | BlTCONS00062542-exon-Sc0000049-1564993656:1665556..1665750 | Branchiostoma lanceolatum | exon |
| BlTCONS00062542-exon-Sc0000049-1564993656:1665047..1665146 | BlTCONS00062542-exon-Sc0000049-1564993656:1665047..1665146 | Branchiostoma lanceolatum | exon |
| BlTCONS00062542-exon-Sc0000049-1564993656:1664281..1664440 | BlTCONS00062542-exon-Sc0000049-1564993656:1664281..1664440 | Branchiostoma lanceolatum | exon |
| BlTCONS00062542-exon-Sc0000049-1564993656:1663443..1663688 | BlTCONS00062542-exon-Sc0000049-1564993656:1663443..1663688 | Branchiostoma lanceolatum | exon |
| BlTCONS00062542-exon-Sc0000049-1564993656:1662624..1662831 | BlTCONS00062542-exon-Sc0000049-1564993656:1662624..1662831 | Branchiostoma lanceolatum | exon |
| BlTCONS00062542-exon-Sc0000049-1564993656:1661571..1662343 | BlTCONS00062542-exon-Sc0000049-1564993656:1661571..1662343 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| Sc0000049 | genome | Sc0000049:1661571..1669863 - |
Properties
| Property Name | Value |
| GeneID | BlCUFF030745 |
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