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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000049:1661571..1668219- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00062540 ID=BlTCONS00062540|Name=BlTCONS00062540|organism=Branchiostoma lanceolatum|type=mRNA|length=6649bp|location=Sequence derived from alignment at Sc0000049:1661571..1668219- (Branchiostoma lanceolatum)
TTTAGCTTCCGGCCGCTACCCAAGCTCCGCTGCCTGGCGCCGGAAGCTAA
ATAGGATAGATTCCAGGCTACAACTCCATAGGTTGCTGAAAAAAATAGGT
TGAATAACTTGCCAAAGGCGTTAGTTGGACAGATTTTCAATTTGTAACCA
TATACTACAATGGCTCTCCACGTCCTCTGATGAAATATCCCCCACCCACC
CCCACCCATTTTGAGCAATTTCTACCATATTTGTCAGTCCTGGTGTGTTA
CAATGACGGTTATGCCGCTTGACCATGTACGTTACAAATTCAAATTCAGG
ACATTCAGATACTGCTTCAAATGTTTCAACGGGTCATGCCCAACTGAAAT
TCTTTGTTTTTAATTTTTCGATCAGTTGAAGCGGGTCGGTGGGAGTTGAC
AGAGAGGGATCAAGATGGCCAACGGCAACACGCCAAGCAAAGTGATCTTC
GTCGTGTTCGGAGTAGTCCTGGGATATACTCTGTCTTTGCTGCACAACTT
CGGCACCACCGTCGATACCCACCCTACTGTCAGCCACGATGTGCCTGTTC
GCTCTTCTTTAGACGAGTCTCTTCGGTAAGTAAAATCTCAACAGTACTGT
GTTGTGTTGTTTTGTGATGTGTTGTGTTGTGTTATGTTGTGTCACATGTG
CTGTGCTGTATTCTGCTGTGCCAGTTGTGCTGTGTTTTAATATAAATATA
GACGACTGCGCTTGGCCACCATTAATCATTTTGTTAACGTCCCGATTGTA
TCTTCGTAAATTGTTAACCCACTTTTAGATATCGAACCTATACTATAGAC
ATCTAAGAGTTGGATTGAACAGAAACATTTCTAGCAACTAACGACTTATT
GATCGATGTAGGCCGCCACAGATACCACTACAGATGCCACAGATACCACT
ACAGATGTCACAGATACCACTACAGAGGGATGGTAGTGTACCGCGACAGG
GGGGTGGTAGTGTACCACTACAGGGGAGTGGTCCACGGAAAATACTTCTG
GACTGCGGAGCTAATGTCGCATCTACTGTGCAGGTAAGAGAACGTTTACT
TCTTTAAAAGAACGTTCTAGGAAACTCACGGTTTGGCTTCGTGATGAAGT
AAATATGTTGAAGAAAAACAAATATTTCTTCATTCATAAAAGTGGTAAGT
GAGAAAAATCATGTCAAATATGTTCCGTTTCCAAGCAAGCGGCAAATGTT
TCACCGAGAAAAAATCCTTGGTTTCACCCGTTGTTGTTCAAGATACTGTC
GAAGTGAATAGCTTTGTTATTATATAGACACAAATGACTAGATTCAACCA
AGGACCTGATTCAACTCTCATACATCAAATTACATATGAAAAGGGAGAAA
GCGTACAGGAGGAGTCTCCATGGGAAATGAAACATGACAAAAGATATGAC
TTGGAAATGTTTAAGTTTCTTTCTGTTCCCTTTTGGGACTTGAATTCAGC
AGCCTTAATTTGGTACGCATGATGTTTCACATTATACTGTTACATACCCT
CCTAGAAGATTGACGTACAAGATAAATTACCGTATACAGTGTGTTAATTC
AAAATACATAAATTCTTGGAACAAAAAAAACAACAACGAAGTACTAGTAT
TATGGAAGAACTACAGGTGGTTGGAAATTCAGCTTATATATCTTTAGAGT
GATCTTTGTTATAAGAGGTAAGATATCAAGTATCGAGACTTCTATTGTTC
TGGTACACACAGTTATTCCGGGAGACATACCCTGATGGAAAAGATTACAT
CATCCACTCGTTTGAACTGGACGCGAGGCTGGCGCCCTACTTCGCATCCT
ACTCCAACCACGTCCTGCACTGCCCAGTCGCCGTGGCGGGGGAAGATGGT
CAGTCATGCCACCCTTAACACTTTTCTACAGGTTTAGTTTAGGAATGGAT
GTATCTTCTTCCTACTGCTTAACCCTGTAACCAATAGATATTTTGTGTCA
AACAGCTACTGCAGTAGGGATAAGGTTTAAGGCTTATACTAATAAGCTTG
TACATTTGCCTGTAATGCTCTGTAAATATACTTTCCTTGTATTATCACAT
TGTAGTAAGGTGTTCTCTCTTTTTGTATCATTAGTTGTTTACTTAATGTT
GTGTTGATATATATGCATATGTCTATGACTATGTTTAGTTTCACTTAAGT
GTAGTTTCATTTTGAATTGATATTTTCATTATGTAATACAGTGTACATAT
TACTCAATTTGTTTATTTGATTTTTCGCTATAATCTTAGTTACCTGGGTG
GCTAACATATAAGCTTGCAAGCTTTCGACCCCCCTCGCACATTTGTATTA
AGATTTCTTATTGTTTTCACTTGTGTCTTTGACAATTAATCAATCAACTC
ACTTTTCAAAACGAGGGCTATATTTCTGTGTGATTTTATCAGCCTAGGCG
TGTAGAACGTTGACATATAGAATAGTTCAAAGTTGAAACGTGAAATAAAC
GCACGAATTTCCTTATCAGGAAATATCACGGCCTACGCCGAGTCAGCCTG
GAAACCGGACAAGGGTGCAGTCGCTGGCAAGGACATGCAGTGGGGAGGGG
GGGCCATCTACGCCTCGGAATCAGAGAAGCAGGGCGAAATTCACGGCCGA
CGATTCGGTGTACGAAACGTCATACCAATGGTGGATCTGTCCACGTGGAT
ACAAGAGAACACAGGTATGTTATAAATTATATATATATATATATATATAT
ATATATATATAGAGAGAGAGAGAGAGTTCAGGCACCACATGTAGCGCGAC
ACATACCTTTCCTCGGATGTTCTCTAATCATTTGGTAACTGCTATTTCAG
CCATATGTCAATACGGTTGTCAATACAGTCGATAAGGCGATAGGTAAAAC
TGACATATGTTTGCTTGTAGTTAGCATGGTCACTTCAAATTAGTTTATAA
TTTTAGTCATTGCCATTTAATCATACAAAGTTGCTATCGTCCGTACCCTG
TGACGAAGGGTATCACCAATGTTTTCTCCTGAGAGCCGTTGTAGCCATTG
AATTTCATCAGGGGCTTCAAGTACATCTACCTTACATGCGGTTTCATACT
AAACTCTTTTTTGACATGTCCAGCCTTGGAAGACTACGTCATCTTCAAAC
TTGACGTCGAGGGAGCAGAGTACGACATCCTGGAGAAGATGGTCAAAGAA
GGGACCTTCAAGTGGATAGACAAGTGCGTGCATTGCTCCTCTATATGGCT
TTCACTTAGAGCTTAGTATATATTAAGTCGACTCTACTGGACTAGCTTAG
TTTGATAACACGTTTGCTTACTCTATATGTTTACAGCTTGTACTGTTGTA
TTTATGTCCTTGTATGTTCCATGTGTTAAATTAGACGACCTGTACCTAGC
CCATCGGGGCATGAATGCATAATGAGGGTCTTTCATTCATTCATTAATGT
AACAATTCTTTACATTTGAAACCGCATCATCTGACCGTTGTTGCTTAACA
GTATCTACTAATATGTAACAATACTTTACGTCTGGGACTGCGTTGTTAGC
AGTAACACCTAGCTTCAGTGCACTGTGAACTAGTCAGTATTGTCCTGGTG
AAGATGACAGGCAGTCATCGAAACATCAGCTCTTGTGAGTTGTAAAATAC
TTGGTTGTGAATAAAAGAATAGTCTTGCTATTCAACATTTCGAGATGTTA
AAAATGCATCCAATAGACCCCTTTCCAAAGTCCGGCGCCATTTTGAGTCT
GGTCTCGCGAGAGCACATTCTAGTGCGCGCGTGACTTGATGTAAATGTAA
ACCATGTATTAAACGTTAAACATTTACAGGTTTTATGGCGAGTTCCACGA
CTCGTTCCCTATACCAGGATGGTCAACACAAAGAAAACAAGGTCTTAGGA
GTACTTTGAAGACCAATGGGATCAACATGCTTGACTGGGCAGGAGAGTAC
AAAAGATATGAAGACATGGAAGCCATTCACAAGGTTGACGTAAGTACAGC
GGGGATGCACATGTAACGCTTTCTGTCCACAACTCGTCATCTAATCATGG
GATACTTGCACATGTAAAAACATATAAACAAATGCATAGATTCCAGACCC
TAGGTGCCTGTAGGCTAACATACAGATATGTTAACGGAAAGGGTTAAAAA
ATCGTATTGAGACGTACATCACTGATAAGAAGGGGTGTCATAGAATGGTT
CTCTTGATTTTGGCTGTGTCTTATATAACGTTCGAGGGGGGAACATCTAC
AGATGTAAAATTGGGGATATATGAAAGTTTCTTGCAAATTTCTGCCCGTA
GGCTAATTGTACGTACATGTACATGTAACACGGGGTGGACGGACAGACAC
ATGCAATGATAAACAATAAACTTCGGTTCTAACTTATTGGGTTCGGCTTC
TTTTTCCGAGACAGTAAAAGACGAATGATCCAACTGTTTCTGTAATATGT
GGGTTTTGTGATGTTAATAGGTGAGTAGTTTTCTTATCGACTGAAAACGT
GGAGAAATTAGGATTGAAAATGGCGGCCTCTTTAAACAGCTGATGAAGAT
AATGAAGATCACCTACTGTCGGTTGTTATAGATCCCAGCTGGTACCCCTG
GAACTGCTGGCGTGGCCTACTCCAGCTGTTCTCCCGGTAGTCCTGCCCGC
CTGGCCCTGACGGTGCAGGTCGGGATGAACAGGAAGGCGGCCCACAAGCT
AGTGGAGACCATCCGGGCGCACCCCAGCAACATGCCGGTCACGCTCTTCG
TCTACGGGGACTTCGTGCAGGACTCCCCGGACCTGATCACCAAGTGGGCC
GACAGATATACGATAGGAATACGAGAGGTTCGTTGTCTTCCTTTGAGTAC
GACTAGTAATTTCCATGTAGAGCTTCCAACAGACTGTATGTACAGTATGC
ATTCTTTAGTACGAAGAAAATACATTTGTTATGAAGATCACTTCCATCAG
CAGTCTAAAGAATCATTAGAAAAGTACAGAATGTCAAAAATAGCAGGGCT
TACCATTTGAAATAAAAACAAATCAACAGCGGATGTCGCTTGAAGACAGA
AGGAAAATGGCCTGTCTGTACATGATGTACAAAATTACTGGTGGACGTAC
CTACGACGTACCCGAGCAAGCAGCTATAGAACCCATACCTACACCTCTAC
TTTCTTACATCACAAGCTCTCCACCACTATAAGAATTAAGACAAAGACCG
GAAGTTTTGCTGCAGTACCAAGGTCACTTGCAGTACAGAGCCCCAGACTA
TACTTTGACTACCAAATAGACGCCACAGTTATAAGACACCATATTTCAGT
TTTGGAGACACAACTATCAAAAAGCTAGTTCAGCTGTGAGGACTTTTTCC
CGCGAATATTTCACATTTTACAGTACGTCGAAGGGCGGTTATACCAATGT
TAGTACCATCATTAATTGTTTTGAAATCTCCCCCATAGAATGCGCCCTTT
CCAGCAGACCACTGGGTCCTACAGAACGCCGACGTGATGAGGATGAGTCT
GATATCGGCCGTGCAGCGGATGAAGGAAGTGGGGGTGCGGCCAGCCTATT
ACTATCCGGACGGCCTGTCGCAACGGGTTCAGGATACAGCAAAGAGCAGA
GGACTGAGGCTCATTCAGCCGACAACCAAGTTCCCTCCAAACCTTGGTAA
GCCGCTTATTTGTCCATCATTTACTAATTTTACACATAAAACATAAGAAA
TACAACTTAACATACCATCACACAACTTGAAATAACGTAACGTAAAATGA
TAAGAATATATTTGATAAGAAATTTTCCAGAATTGAAAATAAAACCAAAT
CACGCAAGAAAACATAAATTTTGGTCGTCGGAGTTAGGTCAAACTATAGC
CGATTCTTAACCTTAGTCTTCTCAATATCTTTCTCTGAATCTGAAATCTA
AGTCCAAACTTTAATCCTTATTTCAGGTACGTTGTTGAGGGAGGATAACT
ACTATCGGTTCAGAGACGTGGAGAGGACACCTAAGGCGCTCCGGATCCTG
TATGAACGCATCTCGAAAGGAGGGATTCTCAGTCTGGACACTGACCACCC
AGACAGCTACATGATCTCAGCTTTCCTCATGGACTACCTGTACGAAAACT
CCGGCTTTCAACTTGTCAATGTGAACGACTGTTTGAACTGATAGAGACGT
TTTCCGAAAAGCATGCACAATATTTCATATTTATTCGATGGACTACAGAT
GATATTGTGTTTGAGGTTGAAGATTCCCTCAGTTGCTTCGGTATAGATCT
GTGCCATTGTTAGTCTTAGAGGTATGATTATCGTTTTGGCAGTAAGAGGT
CAATCAGTCCTAATCTCTCCTGCATGAAAGTAGATATTCGTGATAGAAGC
CCTCTAGTTGACGATTTTGACATTATTTCCCTCACGAGTGAGTTTCGAAG
GGCAAGGGGCTTAGCAAAGCTGACTGGGGGGCGTCATAATGTAAAAGAAT
AATATAGTCAAATTCATTACAACACGACCGTCGTAAGAACTGTAAAGTGA
TAGTCATTAGAAACTGTGAAACTGTTTTCCTGACGCATGGCCTCAAAAAG
TGTTTTCAAGCATGTGAAGCAACACTTCTCTTAGAGAACAATAGCCCTTA
TTGATAGACTAACAAAAGTAAAGGGTCTTTAAACTAGTTTTATCTCCATG
AAAAAAGGCTTTTTCATGGAGATACTGTTTTGCTTGCAATTGCGTTTGG Coding sequence (CDS) from alignment at Sc0000049:1661571..1668219- >BlTCONS00062540 ID=BlTCONS00062540|Name=BlTCONS00062540|organism=Branchiostoma lanceolatum|type=CDS|length=1593bp|location=Sequence derived from alignment at Sc0000049:1661571..1668219- (Branchiostoma lanceolatum)
ATGGCCAACGGCAACACGCCAAGCAAAGTGATCTTCGTCGTGTTCGGAGT
AGTCCTGGGATATACTCTGTCTTTGCTGCACAACTTCGGCACCACCGTCG
ATACCCACCCTACTGTCAGCCACGATGTGCCTGTTCGCTCTTCTTTAGAC
GAGTCTCTTCGGCCGCCACAGATACCACTACAGATGCCACAGATACCACT
ACAGATGTCACAGATACCACTACAGAGGGATGGTAGTGTACCGCGACAGG
GGGGTGGTAGTGTACCACTACAGGGGAGTGGTCCACGGAAAATACTTCTG
GACTGCGGAGCTAATGTCGCATCTACTGTGCAGTTATTCCGGGAGACATA
CCCTGATGGAAAAGATTACATCATCCACTCGTTTGAACTGGACGCGAGGC
TGGCGCCCTACTTCGCATCCTACTCCAACCACGTCCTGCACTGCCCAGTC
GCCGTGGCGGGGGAAGATGGAAATATCACGGCCTACGCCGAGTCAGCCTG
GAAACCGGACAAGGGTGCAGTCGCTGGCAAGGACATGCAGTGGGGAGGGG
GGGCCATCTACGCCTCGGAATCAGAGAAGCAGGGCGAAATTCACGGCCGA
CGATTCGGTGTACGAAACGTCATACCAATGGTGGATCTGTCCACGTGGAT
ACAAGAGAACACAGCCTTGGAAGACTACGTCATCTTCAAACTTGACGTCG
AGGGAGCAGAGTACGACATCCTGGAGAAGATGGTCAAAGAAGGGACCTTC
AAGTGGATAGACAAGTTTTATGGCGAGTTCCACGACTCGTTCCCTATACC
AGGATGGTCAACACAAAGAAAACAAGGTCTTAGGAGTACTTTGAAGACCA
ATGGGATCAACATGCTTGACTGGGCAGGAGAGTACAAAAGATATGAAGAC
ATGGAAGCCATTCACAAGGTTGACATCCCAGCTGGTACCCCTGGAACTGC
TGGCGTGGCCTACTCCAGCTGTTCTCCCGGTAGTCCTGCCCGCCTGGCCC
TGACGGTGCAGGTCGGGATGAACAGGAAGGCGGCCCACAAGCTAGTGGAG
ACCATCCGGGCGCACCCCAGCAACATGCCGGTCACGCTCTTCGTCTACGG
GGACTTCGTGCAGGACTCCCCGGACCTGATCACCAAGTGGGCCGACAGAT
ATACGATAGGAATACGAGAGAATGCGCCCTTTCCAGCAGACCACTGGGTC
CTACAGAACGCCGACGTGATGAGGATGAGTCTGATATCGGCCGTGCAGCG
GATGAAGGAAGTGGGGGTGCGGCCAGCCTATTACTATCCGGACGGCCTGT
CGCAACGGGTTCAGGATACAGCAAAGAGCAGAGGACTGAGGCTCATTCAG
CCGACAACCAAGTTCCCTCCAAACCTTGGTACGTTGTTGAGGGAGGATAA
CTACTATCGGTTCAGAGACGTGGAGAGGACACCTAAGGCGCTCCGGATCC
TGTATGAACGCATCTCGAAAGGAGGGATTCTCAGTCTGGACACTGACCAC
CCAGACAGCTACATGATCTCAGCTTTCCTCATGGACTACCTGTACGAAAA
CTCCGGCTTTCAACTTGTCAATGTGAACGACTGTTTGAACTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00062540-exon-Sc0000049-1564993656:1668101..1668219 | BlTCONS00062540-exon-Sc0000049-1564993656:1668101..1668219 | Branchiostoma lanceolatum | exon |
| BlTCONS00062540-exon-Sc0000049-1564993656:1667645..1667844 | BlTCONS00062540-exon-Sc0000049-1564993656:1667645..1667844 | Branchiostoma lanceolatum | exon |
| BlTCONS00062540-exon-Sc0000049-1564993656:1667187..1667358 | BlTCONS00062540-exon-Sc0000049-1564993656:1667187..1667358 | Branchiostoma lanceolatum | exon |
| BlTCONS00062540-exon-Sc0000049-1564993656:1666372..1666507 | BlTCONS00062540-exon-Sc0000049-1564993656:1666372..1666507 | Branchiostoma lanceolatum | exon |
| BlTCONS00062540-exon-Sc0000049-1564993656:1665556..1665750 | BlTCONS00062540-exon-Sc0000049-1564993656:1665556..1665750 | Branchiostoma lanceolatum | exon |
| BlTCONS00062540-exon-Sc0000049-1564993656:1665047..1665146 | BlTCONS00062540-exon-Sc0000049-1564993656:1665047..1665146 | Branchiostoma lanceolatum | exon |
| BlTCONS00062540-exon-Sc0000049-1564993656:1664281..1664440 | BlTCONS00062540-exon-Sc0000049-1564993656:1664281..1664440 | Branchiostoma lanceolatum | exon |
| BlTCONS00062540-exon-Sc0000049-1564993656:1663443..1663688 | BlTCONS00062540-exon-Sc0000049-1564993656:1663443..1663688 | Branchiostoma lanceolatum | exon |
| BlTCONS00062540-exon-Sc0000049-1564993656:1662624..1662831 | BlTCONS00062540-exon-Sc0000049-1564993656:1662624..1662831 | Branchiostoma lanceolatum | exon |
| BlTCONS00062540-exon-Sc0000049-1564993656:1661571..1662343 | BlTCONS00062540-exon-Sc0000049-1564993656:1661571..1662343 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000049 | genome | Sc0000049:1661571..1668219 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030745 |
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