|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000049:1643395..1651741- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00062534 ID=BlTCONS00062534|Name=BlTCONS00062534|organism=Branchiostoma lanceolatum|type=mRNA|length=8347bp|location=Sequence derived from alignment at Sc0000049:1643395..1651741- (Branchiostoma lanceolatum)
CTTGGGTCTGTGAAGGTTGGATTACTTTCTTCACTCTGGGGACCCGGTTG
TTTTCTGTACGGCTAGTCATGGTAAGAAGCGTTGTTTCTTTTTTTGTAAG
AATTATACAAACGTAGCATTATGTTATATGTAGCTCGATAGCGTTTTACT
CGTAGTGCTTGATACAGCATTGTTTATGTAGCATTTTTCTGTGAATCGCG
GGTGTACATATCTGGCGAGAACTATACCGTCTAGTGGTAAGTAATTTTCT
ATTCTAAAGCTGGCTTTCCTCATTTGAGGTCATTTGAATAATCAGTTTCT
CTGAAATTTGATCGTTTCGTTTATTTTTGTCCAAAGTTTGATGCTGTTTT
TGCACCGCTTTGTGTTGATTTGGTCACTGCCACAACAACTGCGCTTGGTA
TGTGTCATGTTTATATCAACGGTGCTGCCTGAAATACGTGACAAATCGTT
TTGTTGTCGTCGTGAACCTGGTGAATTATAGACGCCAGTTTCAGTGTCAA
AAGCTAGCTTCGCGACAGTTTCGTAGAAAGACCGGATGTGAGGTTACCGT
GCGTGACGTCACTTGACCTTTATCCCGAGATGAAGAGACTATATACACTC
AACACAAAAGGTTCGGAAACTTGGACTTGATCAGTCATACTCCCTTTCTT
ACTCTATGAATTGTATTTTATCATATATCATAAATTAATTCATATATAAT
TGGAAAGCCTATTCATTGCTCTTTGCAATGATACCGCCTTGCTATGGTTC
ATGGGTAAGAAAGAGAACCAGGACTACTTTCGTGAGTACATCAGTCACGA
AAAATGATCATATGTTCGTTGTTTTCGGGTCCAATATGCCATTGGCCGGC
CGACTCTGGCTTACTATTCACTCTATTCTCTATTTGGTCAATTTCTACAA
TTTTTTTCAGCGATCCGCGAAGCCTGGTAGAGGCTAGCAAAGGCTTACCA
CTAAACTGTACCGTGTAGCTGCAACTGTGGAATTGTAAGCGTAATAACAA
TGTTTAACACCAGCATTTCATTTTCCCACTCTGGCACCAGAATTCTTAAG
TCATTAACCTTTCTGCCTTCCTTCGTCAGACATACCGTTTTGGCCCACTC
AAGTGCTAGAAAAATACACACACCTGTCGGTGTAATAACCTTACTAGGAA
ATAGGCATTCAGTGTAGTAACCTAGTAGGAAATAGGCATTCAGTGTAATA
ACCTTACTAGGAAATGGGCATAAATAATGGCGAACCTTACAGTCTGTGCC
TATGTGGGGGTTGTTGCTTGGGAGTGTAGACGTGTGCGAACGTGATGGTT
GAGTAACATCTATAGCTTTGTTTAGTTTAGGTTTCTCTTTGCAATTGAAA
GAACGTGCATGCAGTGCGTTTCTACATTTTTGTACGTCCTACGTACGTGT
ATACAGACGTGAAGCCAAGTTCCACCCCGCCAGACTAGTTTTGCTTCGTC
GGTTAGTGCGTGTGTATCCTATAAATTAGAGTGGGGGTTGGGGTATGGGC
ACAGCAGGACCCATATAGGGCGAGGATAGGGGCTACGGGGTTAGGGCTAG
GGTTGGCCTCTACAGCGTGACCCCCGTCCCACCACCCGCATAGACTTCTG
CTTGAAAAATTACCACGCCCACGAGAGTGATGCACTTCTCTCATTTCATT
CATAATGGAAGCACCCGAGCATTTCTGAGTCAAATCGGCAGTGGCAGAAA
TTTGGCTTGACACTGAGACACACTACCTGCTACAAACATGTGCAAACAGT
GTAATCGTCGTGGTAATCTACGACTCCGCCCCCCTCTCCCTCTCCCTTAA
TTTCTGAATCGTGGCATAGATTATTCATTATTTTGTCAAGCGTAGTGCAG
GCCAAACCTAAATCATGTTTATTATGTCGTGACGCAATCTATGTACCTCG
TCACCATGCCAAACAAAACATGGCGGATTAGCACTGAGTCAAAACACTCC
ATGATGACGTAAGTGACTGTCTCGCCCCCACTTCCGGCCTAGTGGTCACA
AGACGCGTCTTGTTGCCCGGTCGGTCATTTTGAGATAGTAACTTTATAAT
CTCAACATCCTCGACAGAGTCTACATTTCCAGAAAGTCGTGGATTTCCGT
GGAAATACGTCGGATGGACAGTTCTTCGAAGCCAGATTGGGTAAGCTTTG
TGGGGAAAATATTCCATCCTTTTTTATGATAACTTAGGGGGCGTTCTACT
TCTAGTATGACATGTTTGGCTTAGCTATTAGCAAGGAGGTTTAGTTTCCT
TGCTATAAGTAACGTTTAAGGGAAAGAGTTGTTTTCAACTTTGACCCACG
TTTGTGCAGTCTGGCTATCGAACCGATAAAAACGTTGTACTCGGTTGTAA
ACTTTACTTATGAGACAAAAATGTAAATACGCAACTCATACGCTCGGACT
TGCATATAGGCACGAATGTGAACTCGGTGTGGAAAGTCCGCCGATATAGA
ACGTTAAGTACTCATGATTCATGATTTATCGGTATCTAGTTAAATCATAA
GAAAGACATTGCTGCCATGCCATTGTGACTCGGGAGTTTGTGATGCACAA
GCGTTACCGTCACGCTGAGACCATTCAATACACAGAAATACCGTTAGACC
TAGCTGTCAATCAAACTATGGGTTGGGAGGAAGTACATGAGCTAACTAAG
GTATATCGCGAAGGGCCAACAAAGGTTTTGGTAGAGCGTCACAAAATGAT
AAGTCAACAGCTAAAACTTTCCCTAAATAATGGGTCAAATCTTTAGTTTC
TTTCATTTATGTACCGACTGCGCTGCGCTATGTGTAGCGACTTTCCGGTT
CAGAATTTTCCAAGTGTCGCCATGATTGTTTCTTGTCAAAAGCCTTTATG
AGAGTTTCTCGGAAAGACCGGGTATGAGGATATCATGCGTGACGTCACGT
GAACGTTGACCCGATGTGAAGCTGGGTAACTTGAACTTGATCAATCATAG
GATGGGTTGGGAAGAAGCACGTTAATATTGCGTCCGAAGTGCCAACAAAT
GTTTGGTCGAGCGTCACACAATGACTCAACAGTTAAAGCTTTGTCTGCCA
GTTAAACAGGTCAAATCTACAGTTTCTTGAACTTATGTACCAACTTCCGA
GGGGAAAACGCCGCACCATGCCATGTGGATAGCGATTTTCTAGTTCTGAT
TCTCCATATAATATAACATGCACTATGACGTCATGTTGGGACAACACGAT
ATTTGCATTCACACCACTCGCTTTGGAGAACACTCTTGGCCCCTTGTCAC
GAGCTGACTGCACGGTCGTGAGGCTGTCACACCCAGTGATCATCAGGCTA
TCGTCAAGCCCAATAGTCCGTCAGCCAGGAATGTTTGTGGTGTAAATATA
AGAAGTTGTGTGGAGATAAGGGCTCCTTCCTGTACCAAGTAAAGGTTCTG
GTACTAGTGGATTGATTTTAAAAGATTCCAGAGTCGTGTGTGACACCATG
CATATTGTATACTACGGGCAACAGTCAGAGGTGCTGCTTTTGTGGGTCGT
CGCAAACGGTATGATATACAAGTGGCTCTTGCAACATCCGATTCGCAAAG
TAATATCCCGCCAACCCGCACACCCCAGTTTATTTTAGGTTTCAATTGGA
GGCTACACACCCTCGACCATCACTCGATTTTTAGAGATCGGCCGATGTTC
GAAGGTCCATATTAAACGTCCTCGGNGTTCGCAGGTCCTACCATGGTCTA
TATATTAAACCTCCTCGGTCCGACCAAGCCCCGTCTTATGTGTTAGGATA
GATTTCGTAATAAGCTCGAGCCTCTGTCGATTCTGGCGACCTTCTTTTGA
ACAACAAATACGACCGAAACTCGTCTATTGAGTGACAGGGATATAAAGAC
AATTGCTAACTAGTGTAAAGGTAGCCATTGTTCAAAACAGGTACAGGTGA
AACGCCTGTGTACATTAGTGATTATTAAAAGCAATCAATAGGTAATTGAT
TTTGCAATCGTTTTTATGACTTGGTGATTTATCTCACAGCTTATTGTCAT
CAGTTATAACGTTTGAGACTCCTTTAGACCATTCCGAATCCAAAGGAAAC
CAGTCTATCTCTACATCATCATCATCATCATATCGGGCAGCTTGCCCGGA
CTAGGGTTGCTCTTTCCCTCCAGGCAACACGGTCCGCTATAAGTTGGTCT
CTACAATAGTCCTAAACTACTCTCTACCCTACTTACTACGCTGGTTATAG
GGAGAACAATTTGCCAGGGGAGGTTGGCTACCAAAGGGTTTGAGCGGTCT
TTTTTTCCGAGGGCCAAGTGGGAAATATTAACCTTCCCGTGCTCTCACTC
TCCTGGTTAATTATTCCCTTTTTTTGTCGAATTCTGTGATCCGTGCCCTT
GTAGGAAGGCCTAGTGGATCCGGAGGCTAGTAATAAAACCGACTAGGCTT
TAAATTCGCATCGTCTGCTTCCTTTTCGTTTTGTTACAAAGACGGCGTCT
ATTACCTTTGCCAAGAGATTATGTTTCCGGGGCTGTGTATCTTCTGTCTG
TTTGTTTGTTTGTGAACAGCTTTAACTCGTATGTTGTTGTTTTTTAAACT
CGTTCTAACATGCATTGTTCCGTTGTGTTGTGTTGTGTTGTGTTCTTTTC
TTCTTTGTTCCTCCGATCCTAGTCACCCTGTACACATACATCACATCTAA
TACAAACAACACGACTGAAAGAAATGTGTGGGCCCAACAATCTGTTTCCT
TTCTATGTCGGCGTCCTTTTTGAAAACAACAAAGCTATTTTCCATTTTGT
TATGTTCTTCGTTTCTCATTTGTTCTTCATAGTCACCCTGTACTTTACAT
GTAATAAAACAGTATTTGAACAATATCAAAACAAATTTGTGGAATTCCAA
GGGGCTCAACACTAGTAAAGCGCGCACTTGCTATACAGACAGTACTAGTA
GCGAAGTTGATCGCGTTTTACACACAGAATACAAAGAGTTCTGGGCCAAA
AACATCGCTGTCATTCTTTCCTTCAAATTAGCAGTTTTTTTCTGGAGGGC
ACGTCCGTTAAACGTACCAAACCTTTGTTCTCTTTTACCGCAAGTGATCG
GCAATTTTCTACGGTCGGGTTGCTTTCCTGTTGACTTCCTTTGGCTACGT
GACCAAAATGCAAAATTGCCTCAACGGTATGATTTTGATCATGATGAGAG
GAGAAAACATTGCTACCATTTTATCTTTGTTGTCACATGACTGCATGAAA
TCCGTCCTTGTAGTTCGTGAAACTTAGACCCCGTTCACACTCATTTTTTT
CAATCGCGATTGAAGTATAATCGCGATTGAATCGATCCGATCGCGATTGA
TTTTTTCAGTGTGAACGCTCCCAATCGCGATTGGAACGATCCAAAACGAT
CCAATCGCGATTGGATTGTAACTACCTCCGGAGGTAGTTTGATTGGATTA
ATCGCGATCGGATCCAATCCAATCCTATCAAATTTTGAGTGTGAACACAA
CTACGATTCATTCCATCGCGATTCGTGGGGATTTCGGCCGGTACAAGGGT
AGGGTCGCAACTTATCACATAAGTAATGTACCAAGTACAATGTTTTCCCA
CCAATCGTCGCTTCATTCAAGCTCCCAGATTGCCCTGTCTACAGCACTTG
TCGCGTTCATTACCCGTACTACAGCGAGGCCAATATACAAAAGCCTTCGT
CGTTCACGCCTTCTCGCGATCATAGCCCGCCGATTGCGTTCCCTTCCACG
GCTACAGAACATTCTCCAGAGGTACAAAATCATCAAGAGTTGGGGGACTC
CCGCCATTTTGTAGCAAGCGACGCCGAACCTTTGACCTCGTGCTTCAATC
GCGGTCGGATCACGGCGTACTTTAATCCACTTGGCGAAAATCAGTGTGAA
CGCAAAAGTTTATTTGCGTGCAATCGCGATCGGATCGAACAATCGCGATT
ATATTTCAATCGCGATTGAAAAAAAATGAGTGTGAACGGGGTCATAGAAA
TACAAGGCGTTGGTATTGTTGTCTGAGTACGAAATGGTCAGGAGGTCATT
GTGTGCTCTTCCGTATACGTACGTTATCCTTAATCACAATGATCACCATA
TTTGAATAGAGGTAGTAATCCGTGTGGGATTGACGCTATCGCTTGTGCTC
AGGCTTCAGGGTTTATGAACGAAGAACAGATGCCGGGCCCTTGACTTGTC
AGGCCATTTGAGTATGCCCCATTGCGTCACGAGGCTGTTGGCCCCGCCCA
TGAATGCTTGTCTGCCACGTTGACATGTTTGTAGAAGACTCATTAGGTGC
CTACAGTCCGCCGGGTAAACACGAACAGACCGTTTCCTTCGCTTTTATAT
TCTAGATGATTCTAGAGCTGGGCAGTAATCCGTAGGAGTATCAAAGGTAG
GATTATGCAACTTAAAGCCTGCATCCTGAAACAAAGAATTTTGGAGCACA
TCCTGTTTGGATATTAATGGCGGGGTATGAAGTATATTTTGCAGACTAAT
ACCAGGGTTTGATTTTGCCGGAAGCCATCTTGAGCAAAGGCACGACAGCT
ACACTGTAGATAAGGGATTTTAGTGTGAGAAAGTTTCCTGCTTTGTTCTC
AGTGCACTAACGTTTTTAAGCAATGTCATAGCTGTTCTACAAATGGTTTA
ATTGTGTTTGTTAACTTTATTGTCCACCTATATGTAGACGAACTATTAAA
GAAATCTACGATGTGGATTTTATTACTACGTAGTGTTTGTTTATAGCGAC
GAGAGGGATTAGGCTTTAACCCATGAAGTCTTTTGTTTCCGTAGTTTTCG
CACGCAGCCCAGAGTAGAGAGAAGGGGGGGACGTGGACGGCTTCCGCGGT
TGTGTTGCTGCCGATACGCTCGTCCACTTCAATGGAGAAGCGGCCTTTCG
TGATCCTGCCAACAACCATGGCCTCTAAAAATGGCAACGGGCAGCGTTCC
GAAGAACTGAGAAGACGGCTGTGCAAACCGATCGGTTCTTCCGTGAAAGG
AGCCTGTAGCAGTACACATGAGAAGCTGCAACAGCAGTCGTTCCTGTCAC
CCACCATTGTCGACGCCAGATCCATAACGCCGGAGGAATTCAACAAGATG
GCGGCTGTCGCCACCGGCAAAGTGACAAAAGGCAGCGACGTGTCTTCGCC
ACGACAGTGCGAATTTCTCCAGGCGGGACAGGTATTTCTCACCCAGAATA
ATATGAATACTGGGTTTGCGTTTGCTAGCTCAGCTCCATTCCTCACGAGC
CATGTTCAACGCTACGAAAACCATCCACCAGAGGCCATTCAACAATCCCT
GGCTTCACTGAAGAAGGGTCTTGTTGAGTACCTCTCTAGGGCGAAAGCTG
CAAAGGAGAAAGGTCTCACGGAGACAGAGAGAGCTAAATTTGCCGAGACT
GCAACAAAGCCCTTGGCCTTGAAACCTTGGCGAGGGAAGCCATTTGGCTG
TTCAGCCAAAGGTACAGCTGTGCCCGCAGCCACAATCAAACCCCTACCAT
CAACGGCGAGAAACGACGACGTAGTTAAATACCATGTCGTATCACAACCA
CATCCCGGCCCCCGCACCATTCACAAAGTGCCTAACGCTGAACTGCCGGA
GATAAAGCCAATTGATCTGTCACAGGCAGGTACATACAACAGCTCAGACA
ACCAAGCATCACTCAAAGAGGAAATCAACGACCTGAAAGAAAAGATTGTC
GAAACTGAGAAAGGTCTTCAGAAGATTGGAAACAGGAAAAACGACGGTTT
AGTTTCTGAGACGACTGATTTCTCACAACAAGAAGAACCGATTGATCTGA
CGGTTAGCAAGAAGTCTAGCCATGTTGCATCCGTGCCTTCTTCTGCAACA
CAACTCCACAACAAACGGAAAGATTGCTCAGACAACATCACGGAGGGAAA
GAGAAGCCTGCGTGCCTCGACCAAAACCAACACCTTAGCAACCAGGAACA
GCCTCCTCCAAGATAAGAACAGGAAACGCAAAAGAAAACCCAGTGTTCCA
TTCCATCGTTCTGGCGAGTTTGGGAAAGCTTCGGCAAACAACGGTCTTCG
AATGATGTCTCCTGGCAAATCTGGCTGTCCTACTGTAGGAAAACGCGGCC
GTCTCGATGAAATGGTCCAAGCTCTATCCAAAAGATTAGATGATGCCTAC
ATTCCCTCGTACGGAATCGAACATCGGTAGTTTTGGTCATTCTCGTCGTG
TATTTAAGTCTATTTATTTACTGCTTTCAGAAATAACAATTTGTAATGCG
ACTTTTGATAACTTGATATGCATATATAATGTCTTGTTGATAACCTAATA
TGCATACTTATTATTTATAGTAAAGTTTTGATATTTCACCCGTCACGATA
CCATTAGCGCTTCTGGTATCGGATGTTTGTTGAGAATTAAACTGCAC Coding sequence (CDS) from alignment at Sc0000049:1643395..1651741- >BlTCONS00062534 ID=BlTCONS00062534|Name=BlTCONS00062534|organism=Branchiostoma lanceolatum|type=CDS|length=1455bp|location=Sequence derived from alignment at Sc0000049:1643395..1651741- (Branchiostoma lanceolatum)
TGGGTCTGTGAAGGTTGGATTACTTTCTTCACTCTGGGGACCCGGTTGTT
TTCTGTACGGCTAGTCATGTTTTCGCACGCAGCCCAGAGTAGAGAGAAGG
GGGGGACGTGGACGGCTTCCGCGGTTGTGTTGCTGCCGATACGCTCGTCC
ACTTCAATGGAGAAGCGGCCTTTCGTGATCCTGCCAACAACCATGGCCTC
TAAAAATGGCAACGGGCAGCGTTCCGAAGAACTGAGAAGACGGCTGTGCA
AACCGATCGGTTCTTCCGTGAAAGGAGCCTGTAGCAGTACACATGAGAAG
CTGCAACAGCAGTCGTTCCTGTCACCCACCATTGTCGACGCCAGATCCAT
AACGCCGGAGGAATTCAACAAGATGGCGGCTGTCGCCACCGGCAAAGTGA
CAAAAGGCAGCGACGTGTCTTCGCCACGACAGTGCGAATTTCTCCAGGCG
GGACAGGTATTTCTCACCCAGAATAATATGAATACTGGGTTTGCGTTTGC
TAGCTCAGCTCCATTCCTCACGAGCCATGTTCAACGCTACGAAAACCATC
CACCAGAGGCCATTCAACAATCCCTGGCTTCACTGAAGAAGGGTCTTGTT
GAGTACCTCTCTAGGGCGAAAGCTGCAAAGGAGAAAGGTCTCACGGAGAC
AGAGAGAGCTAAATTTGCCGAGACTGCAACAAAGCCCTTGGCCTTGAAAC
CTTGGCGAGGGAAGCCATTTGGCTGTTCAGCCAAAGGTACAGCTGTGCCC
GCAGCCACAATCAAACCCCTACCATCAACGGCGAGAAACGACGACGTAGT
TAAATACCATGTCGTATCACAACCACATCCCGGCCCCCGCACCATTCACA
AAGTGCCTAACGCTGAACTGCCGGAGATAAAGCCAATTGATCTGTCACAG
GCAGGTACATACAACAGCTCAGACAACCAAGCATCACTCAAAGAGGAAAT
CAACGACCTGAAAGAAAAGATTGTCGAAACTGAGAAAGGTCTTCAGAAGA
TTGGAAACAGGAAAAACGACGGTTTAGTTTCTGAGACGACTGATTTCTCA
CAACAAGAAGAACCGATTGATCTGACGGTTAGCAAGAAGTCTAGCCATGT
TGCATCCGTGCCTTCTTCTGCAACACAACTCCACAACAAACGGAAAGATT
GCTCAGACAACATCACGGAGGGAAAGAGAAGCCTGCGTGCCTCGACCAAA
ACCAACACCTTAGCAACCAGGAACAGCCTCCTCCAAGATAAGAACAGGAA
ACGCAAAAGAAAACCCAGTGTTCCATTCCATCGTTCTGGCGAGTTTGGGA
AAGCTTCGGCAAACAACGGTCTTCGAATGATGTCTCCTGGCAAATCTGGC
TGTCCTACTGTAGGAAAACGCGGCCGTCTCGATGAAATGGTCCAAGCTCT
ATCCAAAAGATTAGATGATGCCTACATTCCCTCGTACGGAATCGAACATC
GGTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00062534-exon-Sc0000049-1564993656:1651671..1651741 | BlTCONS00062534-exon-Sc0000049-1564993656:1651671..1651741 | Branchiostoma lanceolatum | exon |
| BlTCONS00062534-exon-Sc0000049-1564993656:1643395..1644997 | BlTCONS00062534-exon-Sc0000049-1564993656:1643395..1644997 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000049 | genome | Sc0000049:1643395..1651741 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030737 |
|
