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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000049:1622372..1628677- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00062523 ID=BlTCONS00062523|Name=BlTCONS00062523|organism=Branchiostoma lanceolatum|type=mRNA|length=6306bp|location=Sequence derived from alignment at Sc0000049:1622372..1628677- (Branchiostoma lanceolatum)
GCTGCCTCGTATAAATAGAGGTCGTCGTTGGGTGTTGAAGGATTTGAAAC
AGCTGCCAACAAACAGGTCAAAAGAAATCCTTGTGCAGATCCGATCCAGC
AACAGAGTGAGTACATAGGGGAGTATATATTCAATAGACAACTTCAGTTC
ACTTTAAACGTTGTATGATCATTTGTCCCTGTTTTGTGAACATTTTATAA
GGCCCGCACTTGCCCTATGTGATCGTTATCTGATATCCCACACAGGGATT
ACGCTTTTATTTGGAGGCGTCTGTTTGCCAAGTCCACTTCAGTCGCATGA
GTGCAACTTTGGATGAAATGGTGACCGACAACTCTTGACTCCTTTTATGC
ATGCAAAGTATTTCTATCCTTGCTAGCGGACACGTCATGTCAGACCCGGA
AATATGTAACAGTTACCATTCAACTCGGCTGTGACACAAACATGTTTCTG
CAATCATTTTTTCCTGCACCTCATATTATTACATATTTGAGGATTTACTT
TAAGGAGACAAAGCAATTAGATACCGATGTATACAAAAGTGTCTGTAATT
TAAACAAGGACGTGTACAGAATATGAGGTAGTATGTGCATTCGTGTTGTA
ACATGTACCTTTGTTTCCGCATGAGTCACTTCCTCCAGAATGGTTTCATG
GTGATTGTGCAATTACATCACGTAGTTGCGCAATCGCTTCTTTTGCAATA
CCTAATATGGGCCTCTCTCCTTTTATGCACAGAAAAGAAATTGGCAGCAA
CCCTGGAGGCTACGGTGCGCTTTCTCCTGAAATCACACCCATTGTAATCC
GGACGATATCCCGTAAACGATCCCCGTTGTGAAGAGAAAACCACCAGGAT
TGGGGGTGAAAGCCAAACACGGGTATTACAGAGACAACAGAGGCAACAAA
CTGAAAGGAATCAGGCCCAAATGACGGACAGCTTACCAACTATATCGGAC
ATCAAGTCCATCAGTCAGGAGGAGTTCGACAGGATGTCAGGGTCAGCAAC
TCAACCGGGCAGTCCTGACAACACCGCCGGCTATATCAGTGTCGTGACAC
GTTCACTACCCGTAACCCCGTTCGTAACCCCGAACACGTCCATCACGTCA
GCTGATACGTCTTGCAGGAAAGCACTTCTCAACTTCCTGGTAAAGGCGTC
CAATGGACTCATCAACGTCCACAGTAAGAAACCTCCAACGACAAACTCTG
GAATTCAAGGAAACCCAGATTTTCCTCGATCGCATTTTGGGGTACGTCTA
TCGAATGTGTTTTCGAGAGATCTTACACAGAGAGAAGGCGGCACAACCAA
CATGGGAGAGCAGACTACAAAACATTCCTCTGTAACAACTGGACGTGGGG
GTGTTTATGCCCGGGGATACCATCCTCCAAGGCCCGGCCTAGTCCCTCGT
ACTGACAAAATCAACACTCTGAAGAGGAAGCTTCAAGAATCACAAGAGGC
GATATGCACCTTGAAGAAGCTTAAACAGGAAGGCGTGATGTGGAGTGATA
ATGGTGACCATCCGGTTGATCTAACCGTCACCGGGAAGGTGGACCGCGAT
GTCCATACATTCCGGTCACATCCGGTTGGTGTTGGTGAGTCATCAACTAC
ATCAGCCAAATCACCAGATTCCCATCATGTGACGAAGGATGTCATCAGAT
CAACTCGTGACGCTCAGTCACAGGAGGCCAATAACTCTTCCAAGCAGAAT
CTAGTTGTGAAGAAGAGACGTAGGCTTTCGCAGATAGTAAACAGCTTGGC
GAGTAAAAAAATAACCTTGAGAACTGGCCATGAGAGTTCCAAGGGGGTTA
TGTTTTAGAGCTTCCGGTATCTTTATCAAACAAATTCTTTTGATAAAACC
AGAGACTTAATGCAGTAGATTGATAATCACGGATATTAGATTTAACAGGA
GGGAATGGATCACTGACAAATTAACCAAGGGTTGATCGCACAGAAATATC
ACTCAACGTCATACTCTTTTTCTCAGACTAAGACCTCCTGTAAGAAGAAT
AATGACAACTGACTATCTTCGTCGTAAGATCTTGTATGTTTAGTTAGAGT
CAGTTCCAAGTCATCAAGAGCTAGAGGGTATTAGATATCTGTGATAAGTT
TGAACTATATTAGATTAAAAAATATTTCAGTCAAAATAGTTCTGAATTGT
TCAAACAATAATTTGATTAATTAGAATAAGAGTTTAAAAACTCAATGTAA
GACTAAACATGGGAGCTAACGGGGAAAAGGTGCTCTCTGTTTGTTCCAAT
GAACATGTATATTCTCCAACCGCAGTGGAGAAAGACTCTTTTTTTTATTC
AGCCTTATTGTACACCCACTGAAATTTTAGACCGATGGCCTTGGGACTCG
GCTGTAGCCGACTCCTTGGCAGGCATAAGGAACTGCGCCAAATGAAATAT
ATAATTCATATAGCTGGTTCTGGTTCGCAGTTAGAGGCCAAGATATATAT
CTTGGTGTATACACGCACACACACACACACACACACACACATTCACACAC
ACACACACACACACACACATACATTGGACCACCGAATCAATAAATCGGTA
CTTTCATACAATTTTGAAACTGTCTACGCACGTAAGCAAATAAAGGGAAA
CGCTAACTAGCTAGCTTTCTGGCGTGAGGCACCCAAGACCTTTCAGGCCA
ATTTAGTATGTCCTATTACGTCACGCCGGTTTTGGCCACACCCAATGAAT
GCTAGCCTGCCACGTTGACATGTTTGTAGAAGACTCATTAGGTGCCTACA
GTCCGCCGGGTAAACACGAACAGACCTTGCCCTCAAATTGCTCCTAGAGT
AGTAATCGGTAGGAGGACGGTAGGACACACAAGTGAAAACCTGCATCCCG
AAACAAGAGATTTTGTGGCACATCCTGTTTGGAATCCAGGGTTGGGTATT
AGGTGTATTTTGCAGACTAATACCAGGGATTGGTTTTTCCGGAAGCCATT
TTCAACTGAGGCACGACAGCTACAGTGCAGGTATGGGATTTTAATGTTTC
GTTTTTCTCAGCGAACTATAATGTCTTATGCAATATGTCGTGTTTGTTTG
CACATTGGATATAACTATATTGGTGACCATTAGTGTCCACCTATATGTCG
ATTGATTTGAAAATCTGCATACAATCTGGATTTTAGTGTAACGTATTGTT
TGTTTTGTAAGCACCGTGGGAACGTCGGCTTGCATTCATGAAGTCCTTTG
TTTCCGTAGTTGTCTACGTCTCACGCAGCCGGCCCAGAGTAGAGAGGAGG
GACGGACGTGGACGGCTTCCGCGGTTGTGTTGCTGCCGATACGCTCTTCC
ACTTCAATGGAGAAGCTGCCTTCCGTGATCCTGCCAACAACCATGGCCTC
TAAAAATGGCAACGGGCAGCGTTCCGAAGAACTGAGAAGACGTCTGTGCA
AACCGATCGGTTCTTCCGTGAAAGGGGCTTGTAGCAGTACACATGAGAAG
CTGCAACAGCAGTCGTTCCTGTCACCCACCATTGTCGACGCCAGATCCAT
AACGCAGGAGGAATTCAACAAGATGGCGGCTGTCGCCGCCGGCAAAGTGA
CAAAAGGTTCACAACAACGCGAATTTCTGCAGGCGGGACAGGTATCTCTC
ACCCAGAATGATATGAATACTGGATCAGCTTTTCCTCCTCTCCTCACAAG
CAATGTCCCGAACTATCAAAAAGATTCCCCGGAGTCCATTAAAAAATCCA
TGGCTTCCCTGTGGAATGGTTTGGTTGAGTACCTCTCTAGAGTGAAAGAT
GCAAAGGAGAAAGGTCTCACAGAGACAGAGAGATCTCAAGTTCCTGCAGA
TACAGTTCTAGTATCGCAGCCAATGGCCCATAATGGGAGGATGCGGGGAA
AACCATTTGGCTGTTCAGCCAAAGGTGCAGCTGTGCCCTCAGCCACAATC
AAACCCCTGCCGTCAACGGCGAGAAACGACGACGTAGTTAAATACCATGT
CGTATCAAAACCACAACCAAATCCCGGTCCCCGCACCATTCACAAAGTGC
CTAACGCTGAACTGCCGGAGATAAAGCCAATTGATCTGTCACAGGCAGGT
ACATACAACTGCTCAGACAACCAAGCATCACTCAAAGAGGATATCAACAA
CCTGAAAGAAAAGATTGTCGAAACTGAAAAAGATCTTCAGAAGATTGGAC
ATGGGAAAGACGATGGTTTAGTTTCTGACACAATTGACTTCTCACAGCAA
CTCGAACCGATCGACCTGACTGTTAGCAAAAAGCCTAATAACGAGGTTGC
ACCCGTGCCTTCTCCTACAACAGACCTCCACAACATCGGGAAAGATTGCT
CAGACAACATCACGGAGGGAAAGAGAAGCCTGCGTGCCTCGACCAAAACC
AACACCTTAGCCACCAGGAACAGCTTCCTCCAAGATAAGAACAAGAAACG
CAAAAAGAAACCAAGTTTTGGAAAGTCTGGAAAAGCTTCGGCCAGCAACG
GCCTTCCGAAGAAGTCTGATGGTAAGATGATTCTTCCAGATTCTCCTTCT
ACACCAGAGCAGATGGCCACAGCAAGGGTGTCTATCCACATGAACACTAC
ACACGTTGAAGATAAAGGTATCTCCAGCAGGAAAAGGGAGCACGATGGGT
CCATGTATTCTTCTGACAAATATGACTGCCCTACTGTAGGAAAACGCGGC
CGTCTCGATGAAATGGTGCAAGCTCTATCTAAAAGACTCGGCGATGCCCA
CTATCCCTGGTACGGAATCGACTATCGGTAGTATCGGCCTAACTCGTCTT
TCATTTAAATTTATCAATTTACTGCCTTCAGAAGTAACACTTTTGTAGTA
TGACTGTTAGGAACCTAACATACATTAGTCACGTTTTAGACATATTTATG
GAAAAGTATGATTTTCAATCTTCCATGATATCATAACCGTTAGTGGTATT
AGATGTTTGCTAAGAATTTAACTGCACTTTAAATGTTAAGCTTTTGGCTT
TGCACTTTGCTCTTTTGCATGTTGCCTCATAGTCGGACAACTGAAGGGAT
CCAAATAAAAAAGGGGAAAATACTTTTCAAGCTATTCAGTAACCCCCAAA
GACGCTAAAATATACTGGCAATTTTCAATACTAGCCTTCGAAGTAGCTCA
ATGGGTAATATGTCAATTTGCATTGTAAAACCTATTGATTTCAATTTACC
GATATAGTTACAAAACCTATTTGAGTAAATCGACATGCTATCAGATGTTC
AACAACGTAAGGTAGTCAGTAATGACAGTTGATTGCAGGGTAAACAACAT
ATGGTACGTTGGAGTCCAATCTGCCTAATGCACCGTCGTTATCACTTAAT
CACACTTAATTAAGACATACATAATTGATGAATATGTCATTGAGAGGACC
TATTGTTACAGTTGCATTTTACATAATTAAAATATTTGCAACAATACTAC
ATTATTTGTTGTTATTTCTATCAGCATCTCGTCCTACTTCATCAATCCGT
AAAATAATTCTAAATCTATTCTTTTAACTTAAATGGTGCCCACGCTTGAT
GTCGCTGGGTAAACCAAGATCCTGGTGAGGTTTGCAGATTTTCCTAATAA
TATCAACGTTAGGCATTGGTTGGACGCATGGAATTCTAATTCCTAGTCAA
TAGAAAACTTATACTGACAGCATATTTCATACAAATTTGCCATATTGACA
CTAATTACTAGTAGAGGTTCGTAAGTCAAGTTAATCAGTGTGTAACTGTA
ATCATATATCGATCTACAACTTTAGATTTACCTAGGTTTAACCTTCCAAC
ATGGCAGACAATACTTACGCCAGTCACGTGAGTGCGAACATCCGACCAGT
AAAAGGGGAACATTTCTTTAAAATTTTGACCAGGACGCCGATCATGTTTT
GTAAATCCGTCATTGTGACTACCTTCAGAGCTGGTTTTGTTGTCTATGCA
CAAACTGCTTGTCAATATGCGACGGACAATTTATATGTGGCATGTGTACG
ATGCCAATTGGGGAGCTCCGAAGATGAAATACAGCACCACAACGTTGTAA
GTACATGACGTCAATAGTTGCCATGACGACAGACTAAAGACCGTTGATTA
ACACTGGCTGAATTCAACAGGTGATTTTCACGGTAAAAGTGAGAACTAAC
GATAGCTATCATTCTGCCATCAACAGTCATAACACGTAACTTCATTTAGA
AGTGAAATGTGGAAAATACAACTTATTCAGAAGAAGAGAAACACGCTTGT
AGTTGAAATACCACTACAGTTGGCTGATTACTGTTTTCGTTATTTTCATG
AAACCATCATCATACATAATTACTGTATTAATCATTCCAAATGAATTGTT
CAGTTG Coding sequence (CDS) from alignment at Sc0000049:1622372..1628677- >BlTCONS00062523 ID=BlTCONS00062523|Name=BlTCONS00062523|organism=Branchiostoma lanceolatum|type=CDS|length=1425bp|location=Sequence derived from alignment at Sc0000049:1622372..1628677- (Branchiostoma lanceolatum)
ATGGAGAAGCTGCCTTCCGTGATCCTGCCAACAACCATGGCCTCTAAAAA
TGGCAACGGGCAGCGTTCCGAAGAACTGAGAAGACGTCTGTGCAAACCGA
TCGGTTCTTCCGTGAAAGGGGCTTGTAGCAGTACACATGAGAAGCTGCAA
CAGCAGTCGTTCCTGTCACCCACCATTGTCGACGCCAGATCCATAACGCA
GGAGGAATTCAACAAGATGGCGGCTGTCGCCGCCGGCAAAGTGACAAAAG
GTTCACAACAACGCGAATTTCTGCAGGCGGGACAGGTATCTCTCACCCAG
AATGATATGAATACTGGATCAGCTTTTCCTCCTCTCCTCACAAGCAATGT
CCCGAACTATCAAAAAGATTCCCCGGAGTCCATTAAAAAATCCATGGCTT
CCCTGTGGAATGGTTTGGTTGAGTACCTCTCTAGAGTGAAAGATGCAAAG
GAGAAAGGTCTCACAGAGACAGAGAGATCTCAAGTTCCTGCAGATACAGT
TCTAGTATCGCAGCCAATGGCCCATAATGGGAGGATGCGGGGAAAACCAT
TTGGCTGTTCAGCCAAAGGTGCAGCTGTGCCCTCAGCCACAATCAAACCC
CTGCCGTCAACGGCGAGAAACGACGACGTAGTTAAATACCATGTCGTATC
AAAACCACAACCAAATCCCGGTCCCCGCACCATTCACAAAGTGCCTAACG
CTGAACTGCCGGAGATAAAGCCAATTGATCTGTCACAGGCAGGTACATAC
AACTGCTCAGACAACCAAGCATCACTCAAAGAGGATATCAACAACCTGAA
AGAAAAGATTGTCGAAACTGAAAAAGATCTTCAGAAGATTGGACATGGGA
AAGACGATGGTTTAGTTTCTGACACAATTGACTTCTCACAGCAACTCGAA
CCGATCGACCTGACTGTTAGCAAAAAGCCTAATAACGAGGTTGCACCCGT
GCCTTCTCCTACAACAGACCTCCACAACATCGGGAAAGATTGCTCAGACA
ACATCACGGAGGGAAAGAGAAGCCTGCGTGCCTCGACCAAAACCAACACC
TTAGCCACCAGGAACAGCTTCCTCCAAGATAAGAACAAGAAACGCAAAAA
GAAACCAAGTTTTGGAAAGTCTGGAAAAGCTTCGGCCAGCAACGGCCTTC
CGAAGAAGTCTGATGGTAAGATGATTCTTCCAGATTCTCCTTCTACACCA
GAGCAGATGGCCACAGCAAGGGTGTCTATCCACATGAACACTACACACGT
TGAAGATAAAGGTATCTCCAGCAGGAAAAGGGAGCACGATGGGTCCATGT
ATTCTTCTGACAAATATGACTGCCCTACTGTAGGAAAACGCGGCCGTCTC
GATGAAATGGTGCAAGCTCTATCTAAAAGACTCGGCGATGCCCACTATCC
CTGGTACGGAATCGACTATCGGTAG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00062523-exon-Sc0000049-1564993656:1628572..1628677 | BlTCONS00062523-exon-Sc0000049-1564993656:1628572..1628677 | Branchiostoma lanceolatum | exon |
| BlTCONS00062523-exon-Sc0000049-1564993656:1625698..1627945 | BlTCONS00062523-exon-Sc0000049-1564993656:1625698..1627945 | Branchiostoma lanceolatum | exon |
| BlTCONS00062523-exon-Sc0000049-1564993656:1622372..1625468 | BlTCONS00062523-exon-Sc0000049-1564993656:1622372..1625468 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000049 | genome | Sc0000049:1622372..1628677 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030737 |
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