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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000049:1619440..1628654- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00062522 ID=BlTCONS00062522|Name=BlTCONS00062522|organism=Branchiostoma lanceolatum|type=mRNA|length=9215bp|location=Sequence derived from alignment at Sc0000049:1619440..1628654- (Branchiostoma lanceolatum)
GTCGTTGGGTGTTGAAGGATTTGAAACAGCTGCCAACAAACAGGTCAAAA
GAAATCCTTGTGCAGATCCGATCCAGCAACAGAGTGAGTACATAGGGGAG
TATATATTCAATAGACAACTTCAGTTCACTTTAAACGTTGTATGATCATT
TGTCCCTGTTTTGTGAACATTTTATAAGGCCCGCACTTGCCCTATGTGAT
CGTTATCTGATATCCCACACAGGGATTACGCTTTTATTTGGAGGCGTCTG
TTTGCCAAGTCCACTTCAGTCGCATGAGTGCAACTTTGGATGAAATGGTG
ACCGACAACTCTTGACTCCTTTTATGCATGCAAAGTATTTCTATCCTTGC
TAGCGGACACGTCATGTCAGACCCGGAAATATGTAACAGTTACCATTCAA
CTCGGCTGTGACACAAACATGTTTCTGCAATCATTTTTTCCTGCACCTCA
TATTATTACATATTTGAGGATTTACTTTAAGGAGACAAAGCAATTAGATA
CCGATGTATACAAAAGTGTCTGTAATTTAAACAAGGACGTGTACAGAATA
TGAGGTAGTATGTGCATTCGTGTTGTAACATGTACCTTTGTTTCCGCATG
AGTCACTTCCTCCAGAATGGTTTCATGGTGATTGTGCAATTACATCACGT
AGTTGCGCAATCGCTTCTTTTGCAATACCTAATATGGGCCTCTCTCCTTT
TATGCACAGAAAAGAAATTGGCAGCAACCCTGGAGGCTACGGTGCGCTTT
CTCCTGAAATCACACCCATTGTAATCCGGACGATATCCCGTAAACGATCC
CCGTTGTGAAGAGAAAACCACCAGGATTGGGGGTGAAAGCCAAACACGGG
TATTACAGAGACAACAGAGGCAACAAACTGAAAGGAATCAGGCCCAAATG
ACGGACAGCTTACCAACTATATCGGACATCAAGTCCATCAGTCAGGAGGA
GTTCGACAGGATGTCAGGGTCAGCAACTCAACCGGGCAGTCCTGACAACA
CCGCCGGCTATATCAGTGTCGTGACACGTTCACTACCCGTAACCCCGTTC
GTAACCCCGAACACGTCCATCACGTCAGCTGATACGTCTTGCAGGAAAGC
ACTTCTCAACTTCCTGGTAAAGGCGTCCAATGGACTCATCAACGTCCACA
GTAAGAAACCTCCAACGACAAACTCTGGAATTCAAGGAAACCCAGATTTT
CCTCGATCGCATTTTGGGGTACGTCTATCGAATGTGTTTTCGAGAGATCT
TACACAGAGAGAAGGCGGCACAACCAACATGGGAGAGCAGACTACAAAAC
ATTCCTCTGTAACAACTGGACGTGGGGGTGTTTATGCCCGGGGATACCAT
CCTCCAAGGCCCGGCCTAGTCCCTCGTACTGACAAAATCAACACTCTGAA
GAGGAAGCTTCAAGAATCACAAGAGGCGATATGCACCTTGAAGAAGCTTA
AACAGGAAGGCGTGATGTGGAGTGATAATGGTGACCATCCGGTTGATCTA
ACCGTCACCGGGAAGGTGGACCGCGATGTCCATACATTCCGGTCACATCC
GGTTGGTGTTGGTGAGTCATCAACTACATCAGCCAAATCACCAGATTCCC
ATCATGTGACGAAGGATGTCATCAGATCAACTCGTGACGCTCAGTCACAG
GAGGCCAATAACTCTTCCAAGCAGAATCTAGTTGTGAAGAAGAGACGTAG
GCTTTCGCAGATAGTAAACAGCTTGGCGAGTAAAAAAATAACCTTGAGAA
CTGGCCATGAGAGTTCCAAGGGGGTTATGTTTTAGAGCTTCCGGTATCTT
TATCAAACAAATTCTTTTGATAAAACCAGAGACTTAATGCAGTAGATTGA
TAATCACGGATATTAGATTTAACAGGAGGGAATGGATCACTGACAAATTA
ACCAAGGGTTGATCGCACAGAAATATCACTCAACGTCATACTCTTTTTCT
CAGACTAAGACCTCCTGTAAGAAGAATAATGACAACTGACTATCTTCGTC
GTAAGATCTTGTATGTTTAGTTAGAGTCAGTTCCAAGTCATCAAGAGCTA
GAGGGTATTAGATATCTGTGATAAGTTTGAACTATATTAGATTAAAAAAT
ATTTCAGTCAAAATAGTTCTGAATTGTTCAAACAATAATTTGATTAATTA
GAATAAGAGTTTAAAAACTCAATGTAAGACTAAACATGGGAGCTAACGGG
GAAAAGGTGCTCTCTGTTTGTTCCAATGAACATGTATATTCTCCAACCGC
AGTGGAGAAAGACTCTTTTTTTTATTCAGCCTTATTGTACACCCACTGAA
ATTTTAGACCGATGGCCTTGGGACTCGGCTGTAGCCGACTCCTTGGCAGG
CATAAGGAACTGCGCCAAATGAAATATATAATTCATATAGCTGGTTCTGG
TTCGCAGTTAGAGGCCAAGATATATATCTTGGTGTATACACGCACACACA
CACACACACACACACACATTCACACACACACACACACACACACACATACA
TTGGACCACCGAATCAATAAATCGGTACTTTCATACAATTTTGAAACTGT
CTACGCACGTAAGCAAATAAAGGGAAACGCTAACTAGCTAGCTTTCTGGC
GTGAGGCACCCAAGACCTTTCAGGCCAATTTAGTATGTCCTATTACGTCA
CGCCGGTTTTGGCCACACCCAATGAATGCTAGCCTGCCACGTTGACATGT
TTGTAGAAGACTCATTAGGTGCCTACAGTCCGCCGGGTAAACACGAACAG
ACCTTGCCCTCAAATTGCTCCTAGAGTAGTAATCGGTAGGAGGACGGTAG
GACACACAAGTGAAAACCTGCATCCCGAAACAAGAGATTTTGTGGCACAT
CCTGTTTGGAATCCAGGGTTGGGTATTAGGTGTATTTTGCAGACTAATAC
CAGGGATTGGTTTTTCCGGAAGCCATTTTCAACTGAGGCACGACAGCTAC
AGTGCAGGTATGGGATTTTAATGTTTCGTTTTTCTCAGCGAACTATAATG
TCTTATGCAATATGTCGTGTTTGTTTGCACATTGGATATAACTATATTGG
TGACCATTAGTGTCCACCTATATGTCGATTGATTTGAAAATCTGCATACA
ATCTGGATTTTAGTGTAACGTATTGTTTGTTTTGTAAGCACCGTGGGAAC
GTCGGCTTGCATTCATGAAGTCCTTTGTTTCCGTAGTTGTCTACGTCTCA
CGCAGCCGGCCCAGAGTAGAGAGGAGGGACGGACGTGGACGGCTTCCGCG
GTTGTGTTGCTGCCGATACGCTCTTCCACTTCAATGGAGAAGCTGCCTTC
CGTGATCCTGCCAACAACCATGGCCTCTAAAAATGGCAACGGGCAGCGTT
CCGAAGAACTGAGAAGACGTCTGTGCAAACCGATCGGTTCTTCCGTGAAA
GGGGCTTGTAGCAGTACACATGAGAAGCTGCAACAGCAGTCGTTCCTGTC
ACCCACCATTGTCGACGCCAGATCCATAACGCAGGAGGAATTCAACAAGA
TGGCGGCTGTCGCCGCCGGCAAAGTGACAAAAGGTTCACAACAACGCGAA
TTTCTGCAGGCGGGACAGGTATCTCTCACCCAGAATGATATGAATACTGG
ATCAGCTTTTCCTCCTCTCCTCACAAGCAATGTCCCGAACTATCAAAAAG
ATTCCCCGGAGTCCATTAAAAAATCCATGGCTTCCCTGTGGAATGGTTTG
GTTGAGTACCTCTCTAGAGTGAAAGATGCAAAGGAGAAAGGTCTCACAGA
GACAGAGAGATCTCAAGTTCCTGCAGATACAGTTCTAGTATCGCAGCCAA
TGGCCCATAATGGGAGGATGCGGGGAAAACCATTTGGCTGTTCAGCCAAA
GGTGCAGCTGTGCCCTCAGCCACAATCAAACCCCTGCCGTCAACGGCGAG
AAACGACGACGTAGTTAAATACCATGTCGTATCAAAACCACAACCAAATC
CCGGTCCCCGCACCATTCACAAAGTGCCTAACGCTGAACTGCCGGAGATA
AAGCCAATTGATCTGTCACAGGCAGGTACATACAACTGCTCAGACAACCA
AGCATCACTCAAAGAGGATATCAACAACCTGAAAGAAAAGATTGTCGAAA
CTGAAAAAGATCTTCAGAAGATTGGACATGGGAAAGACGATGGTTTAGTT
TCTGACACAATTGACTTCTCACAGCAACTCGAACCGATCGACCTGACTGT
TAGCAAAAAGCCTAATAACGAGGTTGCACCCGTGCCTTCTCCTACAACAG
ACCTCCACAACATCGGGAAAGATTGCTCAGACAACATCACGGAGGGAAAG
AGAAGCCTGCGTGCCTCGACCAAAACCAACACCTTAGCCACCAGGAACAG
CTTCCTCCAAGATAAGAACAAGAAACGCAAAAAGAAACCAAGTTTTGGAA
AGTCTGGAAAAGCTTCGGCCAGCAACGGCCTTCCGAAGAAGTCTGATGGT
AAGATGATTCTTCCAGATTCTCCTTCTACACCAGAGCAGATGGCCACAGC
AAGGGTGTCTATCCACATGAACACTACACACGTTGAAGATAAAGGTATCT
CCAGCAGGAAAAGGGAGCACGATGGGTCCATGTATTCTTCTGACAAATAT
GACTGCCCTACTGTAGGAAAACGCGGCCGTCTCGATGAAATGGTGCAAGC
TCTATCTAAAAGACTCGGCGATGCCCACTATCCCTGGTACGGAATCGACT
ATCGGTAGTATCGGCCTAACTCGTCTTTCATTTAAATTTATCAATTTACT
GCCTTCAGAAGTAACACTTTTGTAGTATGACTGTTAGGAACCTAACATAC
ATTAGTCACGTTTTAGACATATTTATGGAAAAGTATGATTTTCAATCTTC
CATGATATCATAACCGTTAGTGGTATTAGATGTTTGCTAAGAATTTAACT
GCACTTTAAATGTTAAGCTTTTGGCTTTGCACTTTGCTCTTTTGCATGTT
GCCTCATAGTCGGACAACTGAAGGGATCCAAATAAAAAAGGGGAAAATAC
TTTTCAAGCTATTCAGTAACCCCCAAAGACGCTAAAATATACTGGCAATT
TTCAATACTAGCCTTCGAAGTAGCTCAATGGGTAATATGTCAATTTGCAT
TGTAAAACCTATTGATTTCAATTTACCGATATAGTTACAAAACCTATTTG
AGTAAATCGACATGCTATCAGATGTTCAACAACGTAAGGTAGTCAGTAAT
GACAGTTGATTGCAGGGTAAACAACATATGGTACGTTGGAGTCCAATCTG
CCTAATGCACCGTCGTTATCACTTAATCACACTTAATTAAGACATACATA
ATTGATGAATATGTCATTGAGAGGACCTATTGTTACAGTTGCATTTTACA
TAATTAAAATATTTGCAACAATACTACATTATTTGTTGTTATTTCTATCA
GCATCTCGTCCTACTTCATCAATCCGTAAAATAATTCTAAATCTATTCTT
TTAACTTAAATGGTGCCCACGCTTGATGTCGCTGGGTAAACCAAGATCCT
GGTGAGGTTTGCAGATTTTCCTAATAATATCAACGTTAGGCATTGGTTGG
ACGCATGGAATTCTAATTCCTAGTCAATAGAAAACTTATACTGACAGCAT
ATTTCATACAAATTTGCCATATTGACACTAATTACTAGTAGAGGTTCGTA
AGTCAAGTTAATCAGTGTGTAACTGTAATCATATATCGATCTACAACTTT
AGATTTACCTAGGTTTAACCTTCCAACATGGCAGACAATACTTACGCCAG
TCACGTGAGTGCGAACATCCGACCAGTAAAAGGGGAACATTTCTTTAAAA
TTTTGACCAGGACGCCGATCATGTTTTGTAAATCCGTCATTGTGACTACC
TTCAGAGCTGGTTTTGTTGTCTATGCACAAACTGCTTGTCAATATGCGAC
GGACAATTTATATGTGGCATGTGTACGATGCCAATTGGGGAGCTCCGAAG
ATGAAATACAGCACCACAACGTTGTAAGTACATGACGTCAATAGTTGCCA
TGACGACAGACTAAAGACCGTTGATTAACACTGGCTGAATTCAACAGGTG
ATTTTCACGGTAAAAGTGAGAACTAACGATAGCTATCATTCTGCCATCAA
CAGTCATAACACGTAACTTCATTTAGAAGTGAAATGTGGAAAATACAACT
TATTCAGAAGAAGAGAAACACGCTTGTAGTTGAAATACCACTACAGTTGG
CTGATTACTGTTTTCGTTATTTTCATGAAACCATCATCATACATAATTAC
TGTATTAATCATTCCAAATGAATTGTTCAGTTGACAGGTGTTGAAAGCTA
TCAACTGGAAAAGACAAATGGTCATGTTTGTAATGTGTGGTTTGTGTTTT
CTCGCTACCTCCCATTCCTCTCAGGCTAGCTATAGGGAAACAGAAATCCG
ACGGTCTTTTTTTAAGCTGCATGTGAGAAAATATGCATAGATATGAGGTA
TTGTGGTTAATTACGTAAGGTAGATTCTACTTAAGTTTTATAGGACCAGA
TAAAACAGACTGCCAAACGGTACAGCTCTTCAGTGTATCTTGTGGACTCT
GAAACGTCCAGAATGGCATACCAACGGACACAATATTACTACAAAATTCT
CTACGCCTATATACTGCGCAGTGTGTAAATATGACCTCTTATGATTTATG
CATGTTGTCCCTACTTAAAGCTCTACCAATTACACGATTTTTTTAATATC
AAATGCAGGTACTAGTATTATTAGTTCTGTGCCATTGTTGTCTAGCAGTA
ATGGTGCGCGGTCNGCATGTTGTCCCTACTTAAAGCTCTACCAATTACAC
GATTTTTTTTATATCAAATGCAGGTACTAGTATTATTAGTTCTGTGCCAT
TGTTGTCTAGCAGTAATGGTGGGCGGTCAGGAGGTTTTTGTTTCTATATT
TTAAACAAGTCTATGGACAGATGCATGTCGGCAACCATACACAGAAAAGA
GCAGTTCTTACCTCCTGTTCTGTTACAAAACATCTATATACTGTACGTCC
AAAAGGAGTGACTGTCAAGGGAAGCATGTTAGAGTGGAACCTTCAATGAT
AAAGTTGTCTGGCCTATTGCTTCTTGAATGTGCAAAGACAAAGGCAGCCA
CTACTGCAGTGCAGACTATCGTGGTTGCAATGAAAATGGGAGTAGCAAAG
ACAATGAAGAAGCTTAAGGGATGATAATCATGATGAAAGTTTTAAAATTC
TATCAAAGTCGTGAAATATGCAGTATCATAATTTCACATTCCATGACGTA
AACGGTTCTTGTTACCTGTTGCTCTTTGTCTGTTAAGAATGTATTTACTC
TAAACAAACAACAATGCTCTACATGTAGCTATGGTGTCTGTCAACGAGCT
ATTTATAGCCTTGCGTAATTGTATGACCAACCACTCTGGACCGGCTAAAA
CCGGTTTGGGCTGCCCCGTATATTATAAATAGATGCCTTCCTGGGGTGAT
GACGAATTTAAAACAGCTGCCAGCGAGCAGATCTGGACAGAGATTATTCT
GCAGAACCGATCCGGCATACGGTGAGTAAATGGGTTAGGTATATATTCAA
TAGACATAAATCAAATCCAACGGAAACGTTTTCCGTCATTTGTCCCTGTT
TTGTGTACACTAAAGGCTCGCGCTTGTCCTGTGAGGTCGTTATCTGATAT
CCCACACTGGGATTACGCTTTTATTTGGAGGCGTCTGTTTGCCAAGTCCA
CTTCAGTCACATGAGTACAAATTTGGATCAAATGGCGACCGACAACTCTT
GACTCCTTTTATGCATGCAAAGTATGCTTCAGCTTGTTGTTACGCACGAT
ATGTAAGCTTGGCCTAATGTGTTTTATAAAACTTCCTTGGTTTTATTTAA
CATTGAACTCCGGCGACACAAACAATGTTTGTATAAATTCGTTATGCACC
TTATACATAATTGATTGTTAACTCAAAGGACACGAAGCATTTAGGTACCG
TGCTGTTTAAGACAATTGTTAGTAAACAAGGGCGTGTATCGTATAAAATG
AGGTAGTGGGTGTATTCCTGTTGTAACATGTACCTTAATTAGCTTGTTTC
CGCATGAGTCACTTCCTCTATAATGGTTTCATGGTGATTATGCAATTCCA
TCACGTAGTTGCGCAATCGTGTCTGTGGCAATACCTTATATGGGCCTCTT
TCTTTTATGCAGCGTCACAGAAAAGAATTTGGCAGCAACCCTGGAGGCTG
CGGTGCCCTTTCTCCTGAAATCACACCCATCGTAATCCGGACGATATCCT
GTAAACGATCCCCGTTGTGAAGAGAAAACCACCTGGATTGGGGGTAAAAG
CTGGACGACGACATTGCAGAGTCAGCAGAGGCTACAAGCTGAAAGGAACT
AAGTAGGCCGAAATGGCGAACAGTCTACCAACTATCTCGGACATCAAGTC
CATCAGTCAGGAGGAGTTCGACAGGATGTCAGGGTCAGCACCTCAACCGG
GCAGTCCTGACAACACGGCCGCCAGTGTCAGCGTCGTGACACGTTCACTA
CCCACAGGTGTAACCCCAAACACGTCCATCACGTCAGGTGATACGTATTA
CAGGAAAGCATTGCTTAACTACCTCGTGAATGCGTCTAACGGCCTCATCA
ACATCTACAGTGCTAAAGCTTCAGCAACAAACACTGGAATTCAAGGAAGA
CCAACTTTTCCTCGGCCACATTTTGGGGTGCGTCCATCGAACATGTTTTC
GAGAGATCTTACACAAAGCACGATCAGCACAATCCACATTGGACAGCAGA
CTACAAAACAATCATTCATTACAACTGGGCGTAGTAATTACCCAAATGTG
AGTGTCCATGCCCGAGGATACCATCCTCAAAGGTCCGGCCCACTTCCTCG
GACTGATAAGATCAACACTCTGAAGAGGAAGCTTCAAGAATCACAAGAAG
CGATATGCACATTGAAGAAGCTTAAACAGGAAGGTGTGATGTGGAGTGAT
AATGGGGACCATCCGGTTGATCTAACCGTCACCGGAAAGGTGGACAGCAA
AGTCGACCATGCCTTCCGGCCACATCCGGTTGGTGTTGTTGAAGTCACAT
CACCCAAGTCACCAGATTCCCATCCTGTGACGAGTGATGTCAGGAGATCA
ACCCGTGACGCTCTTCCATTGAAGCAGAATCCAGCTGTGAAGAAGAGACG
TGGGCTCTCGGAGATAGTTAACAGCTTAACGAGTCGAAAACTTGGCCATG
AGAGCTCTAAGGGGG Coding sequence (CDS) from alignment at Sc0000049:1619440..1628654- >BlTCONS00062522 ID=BlTCONS00062522|Name=BlTCONS00062522|organism=Branchiostoma lanceolatum|type=CDS|length=852bp|location=Sequence derived from alignment at Sc0000049:1619440..1628654- (Branchiostoma lanceolatum)
ATGGCGAACAGTCTACCAACTATCTCGGACATCAAGTCCATCAGTCAGGA
GGAGTTCGACAGGATGTCAGGGTCAGCACCTCAACCGGGCAGTCCTGACA
ACACGGCCGCCAGTGTCAGCGTCGTGACACGTTCACTACCCACAGGTGTA
ACCCCAAACACGTCCATCACGTCAGGTGATACGTATTACAGGAAAGCATT
GCTTAACTACCTCGTGAATGCGTCTAACGGCCTCATCAACATCTACAGTG
CTAAAGCTTCAGCAACAAACACTGGAATTCAAGGAAGACCAACTTTTCCT
CGGCCACATTTTGGGGTGCGTCCATCGAACATGTTTTCGAGAGATCTTAC
ACAAAGCACGATCAGCACAATCCACATTGGACAGCAGACTACAAAACAAT
CATTCATTACAACTGGGCGTAGTAATTACCCAAATGTGAGTGTCCATGCC
CGAGGATACCATCCTCAAAGGTCCGGCCCACTTCCTCGGACTGATAAGAT
CAACACTCTGAAGAGGAAGCTTCAAGAATCACAAGAAGCGATATGCACAT
TGAAGAAGCTTAAACAGGAAGGTGTGATGTGGAGTGATAATGGGGACCAT
CCGGTTGATCTAACCGTCACCGGAAAGGTGGACAGCAAAGTCGACCATGC
CTTCCGGCCACATCCGGTTGGTGTTGTTGAAGTCACATCACCCAAGTCAC
CAGATTCCCATCCTGTGACGAGTGATGTCAGGAGATCAACCCGTGACGCT
CTTCCATTGAAGCAGAATCCAGCTGTGAAGAAGAGACGTGGGCTCTCGGA
GATAGTTAACAGCTTAACGAGTCGAAAACTTGGCCATGAGAGCTCTAAGG
GG
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00062522-exon-Sc0000049-1564993656:1628572..1628654 | BlTCONS00062522-exon-Sc0000049-1564993656:1628572..1628654 | Branchiostoma lanceolatum | exon |
| BlTCONS00062522-exon-Sc0000049-1564993656:1627920..1627945 | BlTCONS00062522-exon-Sc0000049-1564993656:1627920..1627945 | Branchiostoma lanceolatum | exon |
| BlTCONS00062522-exon-Sc0000049-1564993656:1619440..1620458 | BlTCONS00062522-exon-Sc0000049-1564993656:1619440..1620458 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000049 | genome | Sc0000049:1619440..1628654 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030737 |
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