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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000049:1047921..1051787- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00062425 ID=BlTCONS00062425|Name=BlTCONS00062425|organism=Branchiostoma lanceolatum|type=mRNA|length=3867bp|location=Sequence derived from alignment at Sc0000049:1047921..1051787- (Branchiostoma lanceolatum)
AATCACGCCAGGTGAGACCAGGTGTTAGACGGGGACAGGGGACGATCCTA
TATAAAGACAAAGGTACGTCTGAACGGTATGATTCTATGTGATTGTTTAT
TTTTTGATGTAGATGTAAGAGTAAAGTTAAGTTATTATCATGAAATTAGA
ATACATGATGTAGGGTATCTTCTCTGCAAAATAGTAGGAGCTTGAAAGAA
ATACACTGCAAATAGCCAGCTAGTGCACTGGCTATTTGATATGTTTTGGG
TACATTTGATTGAACTGGTTGTGTTTGTTTTTATAGCCACGTGTACCTGT
TGCAGTGTTTTGAATGTTGTTAGAGTTCATCTATCAAGTGGCCTTAACTT
CTCTAACTTCTAAAAGTATTTCAGTGGGGTGTTATATGAAAAGACAGACA
CTTGTGTCTTGTTGTGTAAGTGTTCTGCCCTGAATACGACACTAATTGCA
GTAATCATAGTAATCATAGGGCATCTGGTTAATTGTTTTTTTGTGTTGAT
TGCATTCTCCCCAAATCAGACCACCTGTTAGCCATGCCATGTGAACAATT
CATTGAAAATCAATCATAAGAACACCTTCAAAACTTGACCTGTATCTACT
AGAATAATTCCACCAGGGTACATAATTCCGCCACCCTGAAAAGATACGTT
CGAACAGATCTCCAACCCAACGTCCCACCGCATATCTAAACTGTGCATAC
CTGTGGGGTCCTGCATCTCTCAAACCCACTCTTTTTCAAAGTGGCGGACT
TAAGTAACCTGGCGGATTAATGGCGGTTGAATCTGATGTTCTTTAAAATT
TCACTGACATTCACTGACATTTTCTTGCTTTCCTTTTTTTCAGATCCGAG
TAAAGAATCAACTGCGATGGTTTTGTTCATCAATGTTCACGTGGGTCAGC
GCGTTGAGGTGCTGTACCACGGGCGAGTCGAGCACGGGACAGTACGCTAC
ACAGGACATCTCAATGGGTTGAGGGGAAACTGGGTGGGCGTGGAATTCGA
TTTTCAAGGTACGCATTTTAATTCTAAAGCACTAATTTAAAAGAAAACAC
AAGTTACAATACCATAATAATTGTTATATAGCACCCTCAAATAAGGCTCT
GAGTTTCTCCTTATTAGTTGCACGAATAGAAAACAATAGAATACAGCAAT
CTTTACAGGTTCTATTTTCATTTTCCTCTTTGGTTTAATAGATTTTTTCA
AAGCTTGAATAATGAAAGTAGAAAAACAAACATTCCATGAGTTTCATACA
ACAAAATAATTTTTTTTTTTTCAAATACATACATAGTTTATGATATCTCA
ATGTGATCAATGTGATGATTTTATGATGATCCAGTTGGGAAGCATAATGG
CACATTCCTGGGCCGACACTACTTCTCGTGTAAGGACGGACATGGCGTGT
TTCTCCACGCCTCCAGACTCAGGTTCGAGAGCACCATGGGAAGGTGGACA
CACGACCCCTACAGAACCGTCAGTCCCGTGTCCGAATACGACCCTCTGCT
GTTCGGGGAAAGGGAAAGTGAGTTGGTCAAGATTTCATAAACTTTACTTT
CATTCAGTTGTTCATTTGTTCATTCACTTGTCATTTACTTTTGATTAAGA
TAATCCAATGGGCCAAGAGTGACATTTTTATATAATAGAGTAGTATTTTT
GTACTTGTACACAAAGTTATCATGGAATGGAAAGATTGTAATCTGTTGTT
GTTTTTGTTGTTGTTGTCTTCACAGGGCCAGAAGTGAGACGTCCAGCCAG
TGTAACAAGGTCGTATAAGGACCAGGCTGTGGAAGCTTTCCCTGGTAAAC
ACATGTCATTGTCTCTGTGGTGTTCTCAGGAGATCATGATTTTAATACAA
AGATGTTTAGTTTAAAGGTACATATTGCAGAATTTCAGCCTGAAACTGCA
AATTTTCAGAATCTAAAAAATCTCCCTTCAGATTGACATTTGCAACAAAT
TTCTAACATTTTTCACAATTGAAGCATTGGTAAACAAGTTAAAGCAAGCC
ATGCAAAGTCCCCTAGTTTTTGTTAGCCAACCCAAAACTCCCCAATGACT
TTAACGTTTCTATAAATTTGTATCTTTAATGGCATTAGATTCTTTACATT
ACATATGACAATATGTTAGCATAAAATATGTTGCAGCAAGAATGACATGG
TAAGGTTCATTTTATCCATTTATCTATCTAGGCATTTATGGATCATACCT
TCAGTAGACAAATCGATTTTCAAGGGAGAGGACAATACAATAGCTGCACA
ATGCAAAACATACACGCAGTGCCGTAAATCAAAGATACAGAACAGAACGG
ACAAAGACATGCAGACAAATCATCATTAATCATTGTCAAACACAAGGCAA
GTCTGTTGCTCTAGAGTAAGTACAAAATTGGTCTGTTGAACTAAACGCAA
TTGTTGGACAATGTTTATTTGTATCCTTATGGGAAAAAAGCCCGGTATCT
ATTGTTTACTTTTAGTTGTTTTTTGCTGGGAGTCTCATGCGACCATTGGA
GCTGGCTCAGGCTAATTTGGAAAAGTTAACTTGTGGCAGCAACCAAATAT
GACATCTGTTTTCTTGTTCCAGGTGTTCACTCCATTTTCTCATCACCAAG
AAACTACCACCTGTCTCACTCCGTGGGGAACCACATTCCCGCAGCGACCA
TGCGACCGCAGTCCGCCATGTCCGCCTTCAGCTACACCTCGTCCCCGGTA
CACGAGGAATATGACCCGTACGAGAGGCAGTTCATCTCAAGTCCAACGAT
TCCGAAGACACACATGCCACACTCGGCACAAATTGCCATGGCTAGGAGGG
GTGGTTGGGACAGGTATGGGCTGAGTCTGCCCAGGGAACTCACCTATTAT
TGAACCAACGATCAGCAACACTAACACAACTTGCAGTACTTCTGAGAACT
GACAGAGGTCTCTGTTGCACTATCCTTGCAGAACAGTTGGCTTCCTTACT
AAGACAGCAAAGAGATGTTTTTCTTTCACCTTTTCGTTCAGAAACAGACC
TGAACATTCTGTAAATTCTTTGGTGGAAGAGGGGATACACACACAGGCTG
CCTTACAGATCTAGAGACACTTCATATATACTGTGGTGTACAAAAAAGTC
ACAATATTTGTACCTGAGGACACTAAAAGAATCCACCAAGAGTCATGTGC
AATACAGAGACGGAAAAGGGTTGAATGGTGGGTAGAATTTAGATAAGGTT
TTGTAAGATAAACTGGTGGAAAATAGCTAGCCTAAGAGTTAATTTCAATA
GAACATATTCACAATGTATGCAAAGGGGATAAAACAGTAAATGTTGTATG
TAGTTTGTAACCTTCAAATAGAGTTGTTCTGCAACAGCTTTTCATGTATA
TTTTTGAGACAATAGCTATGATGATATGGTTAAGACTCAGCTGATGCTGC
TACCTAGTTAGTCCTACTGTTAGATGATACTTCTCAAACGATGGAGAAAT
CAAGAGCAAAGTTGTAAGATTCATATCTGATCTGGCAGCTGATAATGATA
GTTGACAAACTGGGTGTCGATATTTTGTGGAAAATATCCTTTTGTAGTCA
TAGGTAGGAACATACGGTTTAAATGTAAAAGAAATATTTTCATGCTATTT
TTATCTGATCTACATACAAGCAAATAAAGAGCATGCTGAAAAGTGAATAA
TTGTGTTGTTTTCTCACAAACCAAGAAAGAAACAACAATTCATGCTACAA
CTTTAGGAGCAATATATAGCTATCCACATACTATGGCCTTCAATTGTCAG
AAATGGCCGTGGAAAATTCTAGTTCAGTGTTGCCTATGAACGTACAGTCC
AATCCATGAATGACAGTCTATATCATAAGACCAAGGAGTCAGCAAGAAGT
GTTGACTACTTGTTCTT Coding sequence (CDS) from alignment at Sc0000049:1047921..1051787- >BlTCONS00062425 ID=BlTCONS00062425|Name=BlTCONS00062425|organism=Branchiostoma lanceolatum|type=CDS|length=759bp|location=Sequence derived from alignment at Sc0000049:1047921..1051787- (Branchiostoma lanceolatum)
TCACGCCAGGTGAGACCAGGTGTTAGACGGGGACAGGGGACGATCCTATA
TAAAGACAAAGATCCGAGTAAAGAATCAACTGCGATGGTTTTGTTCATCA
ATGTTCACGTGGGTCAGCGCGTTGAGGTGCTGTACCACGGGCGAGTCGAG
CACGGGACAGTACGCTACACAGGACATCTCAATGGGTTGAGGGGAAACTG
GGTGGGCGTGGAATTCGATTTTCAAGTTGGGAAGCATAATGGCACATTCC
TGGGCCGACACTACTTCTCGTGTAAGGACGGACATGGCGTGTTTCTCCAC
GCCTCCAGACTCAGGTTCGAGAGCACCATGGGAAGGTGGACACACGACCC
CTACAGAACCGTCAGTCCCGTGTCCGAATACGACCCTCTGCTGTTCGGGG
AAAGGGAAAGGCCAGAAGTGAGACGTCCAGCCAGTGTAACAAGGTCGTAT
AAGGACCAGGCTGTGGAAGCTTTCCCTGGTGTTCACTCCATTTTCTCATC
ACCAAGAAACTACCACCTGTCTCACTCCGTGGGGAACCACATTCCCGCAG
CGACCATGCGACCGCAGTCCGCCATGTCCGCCTTCAGCTACACCTCGTCC
CCGGTACACGAGGAATATGACCCGTACGAGAGGCAGTTCATCTCAAGTCC
AACGATTCCGAAGACACACATGCCACACTCGGCACAAATTGCCATGGCTA
GGAGGGGTGGTTGGGACAGGTATGGGCTGAGTCTGCCCAGGGAACTCACC
TATTATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00062425-exon-Sc0000049-1564993656:1051725..1051787 | BlTCONS00062425-exon-Sc0000049-1564993656:1051725..1051787 | Branchiostoma lanceolatum | exon |
| BlTCONS00062425-exon-Sc0000049-1564993656:1050780..1050944 | BlTCONS00062425-exon-Sc0000049-1564993656:1050780..1050944 | Branchiostoma lanceolatum | exon |
| BlTCONS00062425-exon-Sc0000049-1564993656:1050271..1050453 | BlTCONS00062425-exon-Sc0000049-1564993656:1050271..1050453 | Branchiostoma lanceolatum | exon |
| BlTCONS00062425-exon-Sc0000049-1564993656:1049994..1050062 | BlTCONS00062425-exon-Sc0000049-1564993656:1049994..1050062 | Branchiostoma lanceolatum | exon |
| BlTCONS00062425-exon-Sc0000049-1564993656:1047921..1049215 | BlTCONS00062425-exon-Sc0000049-1564993656:1047921..1049215 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000049 | genome | Sc0000049:1047921..1051787 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030698 |
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