BlTCONS00062421 (mRNA) - B. lanceolatum

Overview


Name	BlTCONS00062421
Unique Name	BlTCONS00062421
Type	mRNA
Organism	Branchiostoma lanceolatum (Amphioxus)

Full-screen view

Sequence

The following sequences are available for this feature:

mRNA from alignment at Sc0000049:1000430..1008363-
coding sequence from alignment at Sc0000049:1000430..1008363-

mRNA from alignment at Sc0000049:1000430..1008363-

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>BlTCONS00062421 ID=BlTCONS00062421|Name=BlTCONS00062421|organism=Branchiostoma lanceolatum|type=mRNA|length=7934bp|location=Sequence derived from alignment at Sc0000049:1000430..1008363- (Branchiostoma lanceolatum)
TAGGCTCATGTATGAAACGTCTTTATGATACATGTGTATAATATTCTTAG
TTAATTGACATGCTGCAGTACCATTGAAAGCAACCAGAGGGCCCATAATC
TAACTCTTTCTTCATTTTGCCACCACTTAACAACATGCCAAATATCATAA
AGATTCACCCCAAACTTTTTGAGTTATACACAGCTCGAAAAACATAACCT
TCTTGGCAAAGGTGATGACACTAGTGCTGATTATAGTCTTCACATTCAGA
TGTAGTCAGCATCCCCCATGCTCTATCTGAAAAGTCTGAGTCTCAAAAAG
ACAGATAACTGCTTTGAATAGCATTAAACCATGTTTTTTTCCATCCATCC
TCTGCTTCAGGCATTACGAGATGAGCACCAGGCCTTACAGATGACCTTCA
GTGCCCTTGAGGACAAGTTGCGGAAGACGCAGGCGGAGAACCAGGAGCTG
GTTGAGAGATGGCTGCAGCAGAAGTCTAGAGACGCCGACAAAATGAACTT
TGAAAATGACCAAATGGCCAGGTATGAAATCTCATCTCTGAACATCAGAA
TGATGCAATGTATGGCAAGTTGATAAAAGTCTTAACAAACATGATAAACT
AACCCTTTGTCCAAGGTTAGATAAAGGCACAACAATAACAACAATCTTCT
TCAGTTAAAGTGAGCGAGTCAGTTTACTCGAAGAAGGTTGAAGTGTAAGG
GGGAAATTCATTAAGAGTGGAAGCCTTTACATTAAAACTCAAATCTGCTT
TGTCAAGTATTCTAGTTTTTGCATTTCTTTTTTTGCGTTTTCAGTAACTA
GTAATTAAGTTATATATATCTGAGGAATACATTTTTTTATGTACAATTTG
ATCATCATAAACCATGTCCTAAAGAGTTGTGGATTTCATTGGATGTTGAA
TTGTGCAATGAGGAACTTCATCCAATGTTTTCTACAGAAAAAGACAAGCC
AAACTCCAGAGAGAATTAGCAGAGGCTGCCAAGGAACCCAGCCTTCCCTT
AACTGACAAGTAAGACAACATATTCTGTGGAATTGAAATATTTTAAAGAA
TGTGCTATTTATTTGTGCTTGGAACAATTTGTCTGACCAGTGTATTGTAT
TAAAAGAATAACTTATGGTTGTAGATGGCATTTCATTGTTTGATTTTTCT
GTGGGTAGGCATGGTTCGAAGAAGAAAGTACATTTTCGGAAAAGATTGGA
ATCAGGACCAAGGTATTTTTTACGGGAGTCTTAACCAATGCCTCTAGCTG
TGGGTTAGAAGGGAAATATGGCTTCGGTGGAGGTGGAGTGCTTTCAAGTG
TCTTTAGCGGGATAGTCTTAGAGGCAAAAAAGGCTGGAAACATACAAGCA
TCACCAATCGCCACTTATGATAAAATGTGCACATTTGTTGCCTTCATATA
AGGTTTGATACTCATCAGGGCTGTCTCCAGAACCTGTCCCTACGTCCTTG
AATAGAAATTTTCTTGTTGGGCAGAAAAGAATTCACTCTGTCCCTCAAAA
ATTCTGAACTTTGTGACATGAAAATACATTTTTTAAAGCTTAAAATGACA
GACTCAACAACGAAAACTAACAACATTGACTTCCAAACTCTAATTGAATC
AAATTTTGCATTTTCCTTTGCAACCATCAATCACAGTTAATGCCCTCCAA
GGCCTGTGATAAACTCCCCACCCCCAACAATGAGTGGGAAGAACAAATAT
TCAAAGCTGGAGACAGCCCAGTTGGTGATTGTTGGTGAAAAGAGATTGTT
TAGCACAAGGTGTTGGAAGGAGAAGTCAGTGGCTGACAGAACAATGTTGT
GACACAGTTTTTTCTCCACACAGGTCTCCAGAGAACGGTCAACCAGACCC
AACAGCGCCCTCTGGTTCACCCATAAACAAGTAATCAATCTTCTCAATTA
CTAGTTAATGACTGGTTTTGGTTTGGATTATTAGATTATGAATGTACTCA
ATAACTATGTAATCAATGCTATTGTGATGAATCTATGATTGCTATGGTTG
TTCATATACTGTTTGAAAATTGGAAAACGTAATGTCATGGTCATCATCTC
TGTAAGGGTCTCATCCTAACGTTCCTGTTGTACAGGATATTCAACTCTTC
CACATCGGAGGCCCCTGCTAACCCTGGACATGTTGGCTTTATTGAATCCA
TTGCTGGATTACTGGCGTAAGTACATAATACCTTTTACTGGGGTATGAGA
TACACACTTGTCAACTTTCAAAAAGACTGGCTGAACCTTTACTTTTGAAA
AGATGAAAAAGTTAAAAGATCATTGCTTTTATATGAGAAATTCAAATTGA
CAAGTTCTTAATCATTGGTGTTTATATCCCTGCAAATCTTTCTTCTGACC
TCCAGCGGTAAAAAAAGGTCGTCTTCACATGATGACGGTTTCGAACCCCA
GACCTCTGCTGCAGGTGCCCCGCCCCGGCACTACGTTACAGTCACACTTC
CTTCGACAGCCGTTCACAAGGCGGTAAGTTTTTTTTTTCTTCTTAAACTT
CTCTTTACTATAAGTATTCTAAACATGTCTAAACAGCATGTCATGTCAGC
AGTTGTTTTCCGTGTCACAATACTCGTTATTCTAGTTTTCCTTCTTTCCT
TCCTTGCATCCTTCCTTCTTTCCTTGCTTCCATCCTTCATTTCTTCCTTC
CTCTCCTTCTATATCCTTCCTCCCCTCCTTCCTTCCTTCATCCATCCACC
TTCTGTCCTTTTCTTCCATCTTTCCTTCACTCCTTCCCTTCCTTCATTCA
TTCATTCATTCATTCACTTGCTCAGCTGCTGTTATTTCATTTATTTATTC
ATTCATTCCTTCCTGCTGTGATTTATACAGGATGGCCATGATGGAGAAGT
CAACGCCGTCCGTTTCAGCCCTTCAGGGAGAATAGTCGCCACAGGAGGGA
CGGACAGGAAACTCAAACTGTGGGAAGTCATGAATCGTAAGTCCTACCAA
GCACCACGCAGGGAAACTTTTGTCCCTTTGTAACAGTGTGGTTCAAGCGC
CACTTACTGACCTGTCTAACTGGTCCAGACCTTGTAGCCTAGTGCATCGG
GTTTGTACACTGGCGGTACAGGTTTGATTCCCGGGAGCCAGAAGACTGTG
CTTCTGGTTTGCACATTTCACCTTGCTGGAATTCATCTAGTGATCACTTT
TATGTTTTAAGCTGTTTGTCATGATAAAGATTGAAACAAGTCTTTAATAT
CATAGATGATGTTTTTCAGGTAAACTTGACTCTAAAGCTGTCCTAACTGG
AAGCAATGCTGGAATCATGTCAGTGGAGTTTGACCCACAGGTAATGATAT
TCTTTTGTTAGCTAAGCTGTTGACTGTTATGGTTGATTTTCTCAGCAGAC
CTCACATCTGGTGTTACAATGAATGTGCTCATTTTGGAGGATTGTTGCTT
TTAAAAATATAATATTGTCATATTGGCTTTTTCTGTTTGTACATCTGTAT
GTAAAGTCATTGGGTTACATTATTTTAAGAAGTACATTGTTTGTAGCCTT
GACTTTGACAATGTAGCCAACGACAGTCTTTTCCTTCTTCTTAGGAAAAC
TACATACTGGGAGCTTCTAATGACTTTGCTAGTAGGGTTTGGAGTGTAGC
TGACCACAGATTAAGAGTAAGTAGTGGCCCCAGCAGGGAGTGTTTATGTT
TGCTATTTCATTACACTTTCACAACCAGATGATGATGGTTTCAACAAGAT
AAGTTACAGGTACAAGTAGATTTTTATGATATTTTTTGTTCGTAAGCTTT
TGCTGAAGTAAAGCAGCTCATATTATCAGGTTCTTTCCAACCAAGTTTGT
TTCAGTTTCCATATACCACAAGGACGCCAAACTATTCTTGTAAATGTACG
TAATTTGCATACTCAGGACAACTTAACTGTTGCCTCTCCCCACCACAGCA
CACACTGACAGGCCACAGTGGGAGAGTCCTAGCAGCCAAGTTCCTGGGAG
ACTCCAGTAGAGTGGTGTCAGGCAGCCATGACAGGACACTCAAGGTCTGG
GACCTCAGGAGCAGGGCATGTAAGTAGGCTGCACTACCTCACAGAACTGC
CAGGAGGCAGTGTTACTGTTAGCATGTGTAATCTTCACATCTTCATGTCA
AAAGTTATATGTGTAACAAAAAGTGTCAATGCTAAATTCATGTTACTTTC
TTACCTGGAAAAAATCTACATCTTGTAACTTGCACTACCACTTAGAACTG
CTAGGGAGCAGTGTTAAGCTGTTGCTGTAGATATGTCAATTTTGCTAATT
GGTGCCATTTTCCTTTCTTCCTGGTAGGTATCCGAACCATTTTCGCGGGG
TCCAGCTGTAATGACCTTGTGACTTCTGACCTCTCAGGCACCAACATCAT
CAGCGGCCATTTTGACAAGAGGATAAGATTTTGGGACACCAGGTTGGTAG
GATGAGAAAATGTTCAAGGTCATTCGAAGAGATGACCTTTCTTGAAGATA
ATTTTCCTCTAACATATACATTGTTAAACTTTACTTCAGAATTCAGTTGT
AATATTTGTGCATAGTGGCACATCAAAACAGTCATCTTTACCACAATATG
TCATCCCTTTCAGAATTAATTTTTGTTCAGTCAGAATTTTCAATCATGGT
TTTGTCACTTATCTTACAGGGCAGAATCGAGTGCCAATGAGATCACACTG
CAGGGGAAAATCACTTCTGTGGATTTATCACTAGGTAGGGGGACTTTTGT
CAAATCTTTTATAATGTAGAATTTTGTATTACCTTTTTCAAGTCTCAATG
TCTCATGTTGTTTTTATTGTTATTGACTTGTTTTGTTTTGTTTACTCTAG
ACAATAAATACTTGCTGAGCTGCTCTAGAGACGACTCCCTGAAGCTAATT
GACTTGAGAATGAACCAAGTCACGGGGACGTTCTGGTAAGTGGTGGATTC
TTTCAATGTTGATTTTCAACAATATAAAAGTACTTAAAGTATTTTGAATT
TTAATGTAACCTTTTCAAATTTTGTCTGCATAAAATATCCTGTTAAGTAG
TGAATTTTTCCAATGTTGATTTTCAACAAGAAAAAGTACTTAAAACTATT
TTGAGTTTTGATATAACATTTCCAAATTTTGTCTGCATAAAAATTTTGTT
ATTTTTTTCAGTGCTGATGGGTTCAAAGTGGGCTGTGATTGGACAAGAGC
GATATTCAGGTTAGTGTTGTTAGTAATCATGGTAATAGCTAGAATAGTAA
TTTTGCAACCTTTATTGAGGATAGTATGTTTGTGAAGAGAATATATCAAA
AAGTTTATGAAAGAATTTTAAGGTTTTCAGCTTAGTAGTTGCCATTCTTC
ATCCTAAGAAATGATTGTAGCACTGTTTCCAGCTTATTGATAGGGATGTA
CACATAATTTTAGGTTCATATGCAAGCCTTCTTGTCTTTTGTTAATTATC
ATTACAAGGTGATCCTGCATATGTTGAAAATCACTACTAGTATACAGTAA
TCATATTTTACATGACCCTTGACCTGACCCATTCTATGCCCCACAGTCCT
GATGCGCAGTATGTTGTAGCAGGATCATCAGACGGTAGTATTTACATCTG
GAACATCACAACCTTCAGACTAGAGAAGACACTAAAGGAACACAAGTAAG
AACCAATGCTTATTGTGTGTTTTAAGCTTCTAGATGCTAAGTAAAGCTAC
AACAAACACAAGTTCTCTGCATGGTTAACATTGAGCATTAGATAATTTCA
TAGCACCTTGTACACAGTCATAACATATCAAGCAATGCTGTTTTAATATC
TACAAAAGCTTCAAAAAACACAATTCTCAGCATGTTTTCTTTTTTACACT
GGAACAAGTTAAGCTGTCATTTAAAGCTTACAAAATATTTATTTTGATTT
CATGAAGTTCAGATTTTTTGGGATGAATAGGAGGAAATATTTTCATGTCG
TGAAGCTGAGATTTGTTGGACGGATGAGGTGAAATTTTGTTCTGTCCCAA
CTCCCAACAAGCAAATTTACGTCCCGAGATGGAGCAACAGTCCTGTCAAC
CACACTTATCCTTCTGTTCTGTTCCCTCCTTTCCCCACAGTTCTTCAGTG
ATAGCATGCTCCTGGCACCCCAGCGGTGTGATGATGGTCAGCTGTGACAA
GAACAAGAAGGTGACGCTGTGGTCGGACTTTTGAGTCCGCAGCCACACGG
TCGATCACACCACGGACAGAAACATCAGCAACACAAGGAACTGTTCTACA
GTATAAAGGCTCCCTCCATGAGGTGTGGCCAAAAAATGACAAGATGTACA
ATCAATGTTACAGTATAGTTAGGTGTACCCTTTCTGCACCATTCCTATAT
GGCAAAACTTTTTTTCATATGCAAATATAGTTATGTTGTAATTGGCAAAT
GTTAAACCAAAAACAGTGCCTGTTACTATCACCGTCTTGCTTGAACAAGG
GTATAAAGACATAAGTTGTTCAAATTTTAATATCTCTTACAGATTTCAAT
CTGTTCACAAAACAATTAAATACTCAAGTACTTCCCATTGGTTGATATCT
TGAGGCAACCCTGGATTTCTTGTCTCTCATTGGTCAGTTCAAAGATCACA
GTTGGAACAAGAGGGCATCAGTTGCAGTCATGACAAATTTTAGGGACAAA
GGGTTTGCATAAGCTGGCTTTGTATTCTAGTACATTTTATGAAAGATTAA
AAGTCGAGAATTCTAGGGTCATAAATGCACAAGAAACAAGCTAAGAATTG
CAACTACAGATGACTTTGTGGTCAAAGACAATGAAAGGACTAGTATCTAC
TTTTATCTAAGAGAATTCTTGTAACTGAAAAAGCACTACTTGAAATGCTT
AGTAACTTTCCCACAAGCTAGGTAACATCAAGATGATATATAGGTACACA
TGTAGTTAAATGCTTCTTTCAAAATCTTTGCTTTACATATTGTTCTGCAA
GCTGTTTATCAATTCTTCAAAATACATTGCACCAAAGATGTAAAGAAGAA
ATTGCACAGAGTATACCTGCTATTTTCACATTATTTTGCTGCAAACAAAT
TTAGAGATGCCATTTATAGCATTCCGTTTATGGCTTTGAAGAATAACATA
GGATCACAAACATTCTTAAAGGTTAAAGACTGGTTGACCTCGCTGTGTGG
TGATTGAAGGTTCATCCCTTTTAGACAGTTGATAGTGCAACAAATCACAA
TAAAAAAAATGAAATCAACTAGTATTTTGTTGCAAGCACATTTGATACGT
CCCTATGCCTTTACTGTACTTGCGATCTTTAGAATGCAAAAATAAATCCT
TGGAACAAAATTTCTAACATGACAGCTTACCTTTTAATTCAATAGAGACA
ACTAGGAAGACAAGGACTTTCTTCAAATATTGTTACCATGAGCATTTTTG
GTGTCGATATGTGGCCAGAAGTGTTCATGTGGCCAGAATTGTGCATGTGG
CACAAATCAGGAGAATCAGGAAATTGAATTGGTTTGGCTTTAGGTACAAA
AGTGAATTTTGCTCTGGTCTGTAGATAGATAGACAGCTACATACACATGT
AGTAGTGCATTGCTACTGTGGCTGAGTTGAAGTCAAGGAAGCCAAAGCTA
TGCTGACGAACATATTTGTTGTATTTCTTCTTTTTGTACATATATTGTTG
TAAGCAAAAGCATTGTTGCAATATCTTGTAAATCTGCTACAAAAGTAAAT
ATACAAATTAAGTATGCTGTAACAGTAAGTGTAGCAATAGCCTCATCTAG
ATATACGTTTCTGCATTGCATAAATATGCATTCTTGTTCTTTTTATTGCA
AGAATATAAATTCCTTTACTTCTATGCAGTTATTTCAATCAAATTGTACA
TTCTGAATTTATTCCTATTTCAATTAACATTGATATCATTTATGTATTTT
TCACTCACTGTATTAGTGAATTTCCCCATATGATGTACATGTAAAATGGG
AATTAAAGAAATTTGACAAAATTCCATATTCCTG

Coding sequence (CDS) from alignment at Sc0000049:1000430..1008363-

>BlTCONS00062421 ID=BlTCONS00062421|Name=BlTCONS00062421|organism=Branchiostoma lanceolatum|type=CDS|length=1335bp|location=Sequence derived from alignment at Sc0000049:1000430..1008363- (Branchiostoma lanceolatum)
ATGACCTTCAGTGCCCTTGAGGACAAGTTGCGGAAGACGCAGGCGGAGAA
CCAGGAGCTGGTTGAGAGATGGCTGCAGCAGAAGTCTAGAGACGCCGACA
AAATGAACTTTGAAAATGACCAAATGGCCAGAAAAAGACAAGCCAAACTC
CAGAGAGAATTAGCAGAGGCTGCCAAGGAACCCAGCCTTCCCTTAACTGA
CAAGTCTCCAGAGAACGGTCAACCAGACCCAACAGCGCCCTCTGGTTCAC
CCATAAACAAGATATTCAACTCTTCCACATCGGAGGCCCCTGCTAACCCT
GGACATGTTGGCTTTATTGAATCCATTGCTGGATTACTGGCCGGTAAAAA
AAGGTCGTCTTCACATGATGACGGTTTCGAACCCCAGACCTCTGCTGCAG
GTGCCCCGCCCCGGCACTACGTTACAGTCACACTTCCTTCGACAGCCGTT
CACAAGGCGGATGGCCATGATGGAGAAGTCAACGCCGTCCGTTTCAGCCC
TTCAGGGAGAATAGTCGCCACAGGAGGGACGGACAGGAAACTCAAACTGT
GGGAAGTCATGAATCGTAAACTTGACTCTAAAGCTGTCCTAACTGGAAGC
AATGCTGGAATCATGTCAGTGGAGTTTGACCCACAGGAAAACTACATACT
GGGAGCTTCTAATGACTTTGCTAGTAGGGTTTGGAGTGTAGCTGACCACA
GATTAAGACACACACTGACAGGCCACAGTGGGAGAGTCCTAGCAGCCAAG
TTCCTGGGAGACTCCAGTAGAGTGGTGTCAGGCAGCCATGACAGGACACT
CAAGGTCTGGGACCTCAGGAGCAGGGCATGTATCCGAACCATTTTCGCGG
GGTCCAGCTGTAATGACCTTGTGACTTCTGACCTCTCAGGCACCAACATC
ATCAGCGGCCATTTTGACAAGAGGATAAGATTTTGGGACACCAGGGCAGA
ATCGAGTGCCAATGAGATCACACTGCAGGGGAAAATCACTTCTGTGGATT
TATCACTAGACAATAAATACTTGCTGAGCTGCTCTAGAGACGACTCCCTG
AAGCTAATTGACTTGAGAATGAACCAAGTCACGGGGACGTTCTGTGCTGA
TGGGTTCAAAGTGGGCTGTGATTGGACAAGAGCGATATTCAGTCCTGATG
CGCAGTATGTTGTAGCAGGATCATCAGACGGTAGTATTTACATCTGGAAC
ATCACAACCTTCAGACTAGAGAAGACACTAAAGGAACACAATTCTTCAGT
GATAGCATGCTCCTGGCACCCCAGCGGTGTGATGATGGTCAGCTGTGACA
AGAACAAGAAGGTGACGCTGTGGTCGGACTTTTGA

Gene-mRNA-Prot

The following exon feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
BlTCONS00062421	BlTCONS00062421-protein	Branchiostoma lanceolatum	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Sc0000049	genome	Sc0000049:1000430..1008363 -

Properties


Property Name	Value
GeneID	BlCUFF030697

You are here

BlTCONS00062421 (mRNA) - B. lanceolatum