BlTCONS00062355 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00062355
Unique NameBlTCONS00062355
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000049:637495..638923-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00062355 ID=BlTCONS00062355|Name=BlTCONS00062355|organism=Branchiostoma lanceolatum|type=mRNA|length=1429bp|location=Sequence derived from alignment at Sc0000049:637495..638923- (Branchiostoma lanceolatum)
GTATATTATATATTTGTTACTCCCTTTTGTATTCACCTCTGACATCTAGT
CCATCATCATCATCATCATCATCATTCTTCCGGATTTACTCCGGTGAGAT
ACAATCAATAAAGTTTTAAATAAGTCCATAATCAATAATATATATCTATA
TCTATGGATGTTTATTTTTGTGATGTGGAATATGATTGTTTTTTTGAACT
CTTGAAGACTACTAAAGGGTATAAAAAGAAAGGAAACAAACAATATAACC
GTAATCATTGTTACTCTAGTTACTCTAGTACACCTGAAATTGTTCGTTCA
CTCATCTTCTTTCTCCTGGAAGTTCAAACTGGCTATGGCAGACAACCTGA
CGGAGGAACAGGTTGGAGAGATAAGGCAGGCCTTCTCTTTGTTCGACACA
GACGGGAAGGGCTGCATCACCACTGGAGACCTCGGAACTGTCATGGCGTC
TCTTGGTCAGAACCCAACTGCGGTTGAGATACGTGTATGACCTTTATCCA
TAACCTGATCTGCATAGTTATAACAAAAGTTAACGAAGAAGGCGGCAGTA
GTCGTTGAAAATTTGGCCCGTGTAAACCTTAGTGTTGGAAAAAAGTTTAG
TATTGGACTATGACTACTTCGAACACAAGATGAGCTTCCATGATAGTTAA
CAAAGTTGTTGGTACACAAGCAAGAGACAGTCGCCTGTCAACGTTCCCTT
CTGCTACCTTCCTTATGGAAATATGGCATTGTTGTACAATTTTCCGCACG
TATAATTTTTATCAGTAAAGCTACATGACCTTATACATATAATGATATAT
ACCCCATTATACATCATCCAAATTATCCCTATAACTTTTGTATTCCGAAT
AGATGCAAGGAAAAAGGTGAACTACATAATAGACGGATAGTACTATGGCA
TACATGATTGTTGAGCAGAGGACGTTTTGTCCAGGACATGCCATTTTCAA
GCACTTTTATAAGGCTACAATACTTTTTTCAGGCTATGGTAAAAGAGGCT
GATGCGGACGGAAATGGAACCATAGACTTCCCAGAATTCCTCACTATGAT
GGCGCGAAAAATGGAGACCGACGCAGACGAAGAGCTGAAGGAAGCGTTCC
GAGTGTTTGACAGGGTATTGCGTCATCAAACACTTTCTCAGGGACGAACA
GTCACCACAAAGTGTAGAATACATAGACTATCCATTGGCAAGCAGATGTT
GGAGCTAGGGAAAGATTGTGACTTTCTTCTGATTGTCTCGGACAGAACAA
GGCAAAACGAAGTCACAACATCTTCCCTTCAAACCTCTGCTTGAAGAGTT
CAATTCGTAGTGCTGTAGCGAGGTCAAATCTAAGTTTCCCCATTTAGGCT
TGGCATAATGTATGCTTATTTGCTATCCTTAAAATTGGACATACTTAAAA
TCGTTGCTACTAATATTGACGTAAGGAAA

Coding sequence (CDS) from alignment at Sc0000049:637495..638923-

>BlTCONS00062355 ID=BlTCONS00062355|Name=BlTCONS00062355|organism=Branchiostoma lanceolatum|type=CDS|length=357bp|location=Sequence derived from alignment at Sc0000049:637495..638923- (Branchiostoma lanceolatum)
ATGCCATTTTCAAGCACTTTTATAAGGCTACAATACTTTTTTCAGGCTAT
GGTAAAAGAGGCTGATGCGGACGGAAATGGAACCATAGACTTCCCAGAAT
TCCTCACTATGATGGCGCGAAAAATGGAGACCGACGCAGACGAAGAGCTG
AAGGAAGCGTTCCGAGTGTTTGACAGGGTATTGCGTCATCAAACACTTTC
TCAGGGACGAACAGTCACCACAAAGTGTAGAATACATAGACTATCCATTG
GCAAGCAGATGTTGGAGCTAGGGAAAGATTGTGACTTTCTTCTGATTGTC
TCGGACAGAACAAGGCAAAACGAAGTCACAACATCTTCCCTTCAAACCTC
TGCTTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00062355-exon-Sc0000049-1564993656:637495..638923BlTCONS00062355-exon-Sc0000049-1564993656:637495..638923Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00062355BlTCONS00062355-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000049genomeSc0000049:637495..638923 -
Properties
Property NameValue
GeneIDBlCUFF030680