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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000049:614901..618224- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00062338 ID=BlTCONS00062338|Name=BlTCONS00062338|organism=Branchiostoma lanceolatum|type=mRNA|length=3324bp|location=Sequence derived from alignment at Sc0000049:614901..618224- (Branchiostoma lanceolatum)
CCAGCTGCTGCAGCGCCGCGTGCCTGCGAAGCTGGTGTGTTACGCCGAAG
GGCGGTTATACCGGATATACAGATATAGATACAGTTCTTCTTCAGGAGAT
CCGTCGCTGGGTGAATATTGTTGACAGGAGCGGAGATGGTGCCGTGGGTA
CCCAAGAATTTATCGCCTTCATGAAAAAGATGCAAGTTTTCCGGAAGTAT
GACAAGGCAAGGGTGTTTTGTTAACTTTTAAATTACCAATGGGTTGTCAA
AACAAAAGGTTGTAACATGAGAAGTGGTACGGGGCAGTGTGGTCAACATG
AAATTCTGCTTGTTTTCCTTTTGCAGCCAGTTTTGTTAGAAACACAAGTC
CTTACAAAACAAGCTATGTGTTGTGTTTTTGTCTGAAATATCTTCCCAAC
CGACAATGACAGGATCGTACCGGCTTCATCACGAAGGATGAAATACAACA
GGGCGTGTCCGAAATGGGCGCGGGGGTAGAGATGGAGGAGATGCTGATGA
AATGTGACACTAACGGGGATGGAAAGGTTAGCAAGCAACTGTTATCATTC
GCAGTATTTGCACTTGGCTCCCTCAAACAACTACATTTATGTGTGTATGG
TGGTAATATGTAACCCGTTTGCCACCCAGCTGACAACAACTTGTTATGCT
CCTCTCTGCAGTTATGTATTATCATTTGTATCAATTTCGTTTGTTTCTAC
CCAATATTGACTTATATTAATTCCATCGTTTATATGATTTTGACTAGACT
TCAAGCATTGGTATTTGTGTATTTGAAATCTGCGTTTTAATAAGTACTTT
TAGCACTCGGTGCTGCCGATGTGCCAACCTTTCAAAGGTGAAAAAAGTTC
AAAGATCATAGGCTCATAAACTTAATACCCCCCTCCCCATCCAAATTTAC
TGTAACTGTGGGCACTAATAAGCAAATATGGGAAACTGCTCAATGCTCAG
CTCTTGTTGGCAGATATCTATCCATTAAAGAAAAAATAAAACAAGTATTG
ATAGTGATTGGAATATTGGAAGTTGTATATTCAATTTGGCTAGTTGAAAA
TAGAGTTTGATACCTTGTCCTTGTATTTGGCGTGCCTGTGTATGTGTGTG
TGTGTTTGTGTGCGCGGTGGATGTTTTTGCGTCAGGATATTCTAGTCAGC
ATCACCTCAGAACCTCTGGAAGGACTTTGAGGATATTTGGTATGTGGGTC
GATTTTAGGAAGACGAAGGGCAAGATTAATTATGGGTCCCCTAGCGGCTT
TCCTTGGTTCGACGAAAATCGCTAAACTTTTTGTTGGGTGAATGAAACTT
CTATTAATTCATATTCAACTACCCTGTACCCCCTTCCTGTTGTAGATCAA
CTACGAAGAGTTCATTCTACTTCTTCTGGCAATGGATCCCAAACTGTCAG
GTCTACCGGAGGAAATAGACCCGCACGAACAGGTTAGACTATTCTTGCAA
AGTGACAAGGATCACAGCGGAACAGTCACCGCTCAGGAGATCATCGACTT
CTTGGATTCTGTCGGCTTGAAGCAAGCTGAGAATGAGAAGCAGGTACATG
TGCTATCTTTGTCACTGGTTCTGTCGATATCAAGCTCTTCACAGATAAAA
TTAAGTAAATGGGCGAAAATGTAGACAAAAAAATGTAAAGGAACGCCGGT
AACCCAGCTAAAAGCCTTCGAGGTAGGAGCAGGAATGTATGGAATGGAAA
TGACGATGACTGCGCCATTTTGTGTCACATGAGCGCGCGTAGATGGAATT
AGCTAGAAGCACAAGTTACAAAACAGAACCCTCATTAAATCAGGACCCCT
ATCGTACTCTCCAAGCAGAGGAGTGGGCCCGGCAGGTTTTTGGCGTGTTT
TAGGCGTTTTTGTCGGGCTTATATTACACCGAACGGTCTGTCTACTTTGT
CATGGTATCTTTCTATCTTTAACCCACAGTGGGTTAAAGATAGAAATATA
CCATGACAAAGTAGAAAGCCCGACAAAAACGCCTAAAACACGCCAAAAAC
CTGCCGGACCCACTCCTCTGCTTGGAGAGTACCCTATCGCTCCACGTTAC
ATCGCCCCTTTCGCGAGCGATGTAACGTGGAGCGATAGGGGTCCTGATTT
AATGAGGGTGCAAAATAGCAGTCGTAACATGCTGCCATCCTCTCCAGGAG
ATCCGTCGCTGGGTAAAGATTGTTGACAAGAACGGAGACGGAGACGGAGC
CGTGTGTGCCGATGAATACCTCAACCTGATGGGAAAGATTCAATATATGA
AGATGCACTTTGACAAGGCAAGGGTGTACTGTTTTCAACTACTATTGGTC
TGTCAGGAGAAAGTTATAATATAAGATTATGGTATTGGGCAGTGCGGTCA
ACATAAACTTCTGCTTGTTTTTGTTTTGCAGCCATGCAGTATTGTCACAA
ACATAAGTACATTGTAGAACAAGCTATGTGGTTTTCTTTGTTTTCTTTGT
CTGAAATATCTTCCCCACCAATAAATACAGGATGGTAGTGGCTTCATCAC
CCGGGATGAACTACGCCAGGTAATGATGGGCTATGAAGATTCGGCAGAAA
TAGAGGAGTTAGTGATGGCATGTGACGCTAACGGAGATGGAAAGGTTAGG
CTTATAAACTTTCAAAATACCCTCCTCCTCATCGAGATTTACTGTAACGT
TAACCGAGGCTACTAAACAATTAATTATGACAAATTAGTGAATGCTGCTC
TTCTTGGTAGTTGTCCATTCACGAAGGAAAATATCCCAGGAATTGATGGT
GTTTGGAACTTAGTGTATCATATTTGGCTAGTTGAAAATGGAGTTTGATG
CATTGGCCCAACTTTTCAAACGGACATGACTCGTTTCCTCCACGAAAAAC
GGAGGTATGGTCTTTGATGTGCCTGTGTATCATTATCATCATCATGTGCC
TGTGTATGCGTGTGTCTGTGCGTCTGTGTTTTGGACATTTGTGGTCACTA
TAACGGCAGCATTCCTTGGTACTGCAGCAGAACGTCCCAGGAAGTTTGCA
AGTTTAAAAAGCTTTTAAAAATATGACTTTGTTATCAGAAAAAGATACTG
AAATACACGGTTAGCCCCTCCTGACTGTATCAAGATATCAGAGATCTAGC
AAGTTTGCGGTTTAGTTTGTATTTTCTTTTTTTGTAGTTTTTGTTGACTG
ACTCGTACTTTTTGTTGTCAATAAAGCTTCTATAAATCAACAACTAATCA
CTCTTTTCCTCTTTCCCGCTAGGTCAACTACGAGGAGTTCTTGGAGAACT
TTCATAATTAGAATCACGAAAAGGAAGACTGAGAGTAGCCCTGCATTCGT
CAGAGGATTTTTTTTAGTTCANGG Coding sequence (CDS) from alignment at Sc0000049:614901..618224- >BlTCONS00062338 ID=BlTCONS00062338|Name=BlTCONS00062338|organism=Branchiostoma lanceolatum|type=CDS|length=789bp|location=Sequence derived from alignment at Sc0000049:614901..618224- (Branchiostoma lanceolatum)
AGCTGCTGCAGCGCCGCGTGCCTGCGAAGCTGGTGTGTTACGCCGAAGGG
CGGTTATACCGGATATACAGATATAGATACAGTTCTTCTTCAGGAGATCC
GTCGCTGGGTGAATATTGTTGACAGGAGCGGAGATGGTGCCGTGGGTACC
CAAGAATTTATCGCCTTCATGAAAAAGATGCAAGTTTTCCGGAAGTATGA
CAAGGATCGTACCGGCTTCATCACGAAGGATGAAATACAACAGGGCGTGT
CCGAAATGGGCGCGGGGGTAGAGATGGAGGAGATGCTGATGAAATGTGAC
ACTAACGGGGATGGAAAGATCAACTACGAAGAGTTCATTCTACTTCTTCT
GGCAATGGATCCCAAACTGTCAGGTCTACCGGAGGAAATAGACCCGCACG
AACAGGTTAGACTATTCTTGCAAAGTGACAAGGATCACAGCGGAACAGTC
ACCGCTCAGGAGATCATCGACTTCTTGGATTCTGTCGGCTTGAAGCAAGC
TGAGAATGAGAAGCAGGAGATCCGTCGCTGGGTAAAGATTGTTGACAAGA
ACGGAGACGGAGACGGAGCCGTGTGTGCCGATGAATACCTCAACCTGATG
GGAAAGATTCAATATATGAAGATGCACTTTGACAAGGATGGTAGTGGCTT
CATCACCCGGGATGAACTACGCCAGGTAATGATGGGCTATGAAGATTCGG
CAGAAATAGAGGAGTTAGTGATGGCATGTGACGCTAACGGAGATGGAAAG
GTCAACTACGAGGAGTTCTTGGAGAACTTTCATAATTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| BlTCONS00062338-exon-Sc0000049-1564993656:618019..618224 | BlTCONS00062338-exon-Sc0000049-1564993656:618019..618224 | Branchiostoma lanceolatum | exon |
| BlTCONS00062338-exon-Sc0000049-1564993656:617699..617812 | BlTCONS00062338-exon-Sc0000049-1564993656:617699..617812 | Branchiostoma lanceolatum | exon |
| BlTCONS00062338-exon-Sc0000049-1564993656:616682..616879 | BlTCONS00062338-exon-Sc0000049-1564993656:616682..616879 | Branchiostoma lanceolatum | exon |
| BlTCONS00062338-exon-Sc0000049-1564993656:615958..616077 | BlTCONS00062338-exon-Sc0000049-1564993656:615958..616077 | Branchiostoma lanceolatum | exon |
| BlTCONS00062338-exon-Sc0000049-1564993656:615631..615744 | BlTCONS00062338-exon-Sc0000049-1564993656:615631..615744 | Branchiostoma lanceolatum | exon |
| BlTCONS00062338-exon-Sc0000049-1564993656:614901..615002 | BlTCONS00062338-exon-Sc0000049-1564993656:614901..615002 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000049 | genome | Sc0000049:614901..618224 - |
Properties
| Property Name | Value |
|---|
| GeneID | BlCUFF030680 |
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