BlTCONS00062337 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00062337
Unique NameBlTCONS00062337
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000049:611115..613272-

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00062337 ID=BlTCONS00062337|Name=BlTCONS00062337|organism=Branchiostoma lanceolatum|type=mRNA|length=2158bp|location=Sequence derived from alignment at Sc0000049:611115..613272- (Branchiostoma lanceolatum)
CCATTCTGTGAATCAGAAAATATCTTTCTCTGTCTTTTTTTCTGTAACTA GTTGGAAAAATGTTAACGGTGTAAGATGAGAATGAAGAAGAACGGTACAT ATTTTGGAGATAACATTGAACAAAAAAGCTGCAGGATATACACGGATATT ATGCTATGGCAATAAGGTATTTGAGTGTTAACAAAGCACGTTTATGAAAA CAATGTTAAGTAAAACGTTGTCATACCACAACAAGATATGAGTGTCATCG ACAATTTGCACGTTACCCCACGTAACCCTGTAATGATTTTGATCTCTGTT GTTGGTCGTTAATAATTCATTGAGAATTGTCATACAAAAAAGACGGTAGG CTGGAAACTTTGTCCTTGTGAGCAAACCAAGATAGGAAAAATGACTATTC GCGTTTTTGTTCTAATTTTTTGCTGATATATCAAATTGTCATGTATTTGA TGTACTATCAGAAAAAAAACACAGAAAATGGACAGATCGACCAAATTAAT CAAGGAGAGGTTTCCTTTTCAAATGATAAATGACGCATACGTCTTTGCGT GTGATTGTCGATATGCTTTTTGTCACGCTAACTCAGGGACACACGAGCAG TGACCAACTGACAGAGGAACAGATCGCTGAGTTCAGGCAGGTTTTCTCGA TGTTTGACCAGAACGGTGACGGCCACATCACCACTGCTGAGCTGGGAAGT GTGCTGCGAGCTCTGGGGCAGAACCCGACAGACGCCGAGCTGCGGGTACG GTCATGCTTTGTTCTGCATGTTTGTTTACTCAATAGAATGCTTGATCAAG TTATTTCATAATACCAATGAGAACTGAGAAAAATGAAGAAAAAGAATGTA AATAAAAGAATAAAAAAGATACCAATAAGAAACAAGAACTACAAAATATG ATAAAGCTAATGAATATGGCGACATTGATACCTTAAATGGCTTAAAAAAA GAATACTAGCAATTAACAATGAATGTTGAGGAGAAACCAGCAATGTAAGA ACGTACTGCAGAATAGCAAGACAAAAGAACAATGGTATTAATGAGAAATG TTACATTTTGAACATATAGATATCACTTTTAAGTGATAAAAAAGTTTAAA GTTGTAACATTTTTTTGGTCTCTGGATCTTTGTTCATCTGTGCAATCAAC AGACTCAGATGGTTTTCGTTAACTAAATGAGATCCCACTACCAAAATTAT ATTCTGTAAACTACCACAGCCAAGATCCGTATCACATATGTGAACTACTG ATTAATTTGCATATTGATATTTCGTAGGACATGATAAGAAAGGTTGACGT GGATGGAGATGGAACCACCAACTTCTCGGAGTTCCTGCGCCTTGTGGGTC GGAAGAGCTCCAGAGAGAAGACAGAGCAAGAGCTTCAGGATGCGTTTCAT GCATTCGACAAAGTAAGGCCGAGGAAAAGGAGTATTTCCGGTTACCCGAC CGACCCTAGCAAAAACCTGCCAACCCTAGTCTTATTTTGTTGACCCGCTA ACACTGTCCTGATGCTGTCTAGCGTTGCAATCTTAAACAGTATTTCTTGG GTCACTTCGACTGCACTTTTAAAAAAAGAAGAAAGAGAACCCTTACCCAG CGACACTAATTTATGAGTACTGTAACCGGAATCACAACATTTTCTATTAT GCCTAACGGCATGTCATGAATTGTTTGATAGTACCTAGCCTCCTGTACAA CCCTTCCGGGTGGCAGGCCAGTAGCTTTTTTCGCCGATTTGCGCTGTTTT CTGATTGCTCGTGTACTCTAATATATATGCTTCTAGAGTTGGCGCACTAA TCAAGCTTGGTCATATTAGAACACTAACTTGCGAACGATTAGAAATAGCG CAAATCAACCAAAGGGCCATAGAAAGCCACCAGCCATCCAGAATGTCTGC GTATAAGGCTGGGTAAGGATGATACCACAGAACCAAAGGCAATGGGTGTT TAAAGCCATATTTTGTATGCAAAGTAAACTTAAAAGTCGATTTTCTTTTG TACATGTAACTAAATCCCGCTTTAGAGTTCTCATTTAGGTTCATTTCAGC ACCAAGGACAGGGAAGTAACATTATCATTGACATTTAAAAAGTCCATATA CGTTCAATGTAAGAATACGATTTTGGGGATCGATGGGACACCACGTACAA AGGACGAG

Coding sequence (CDS) from alignment at Sc0000049:611115..613272-

>BlTCONS00062337 ID=BlTCONS00062337|Name=BlTCONS00062337|organism=Branchiostoma lanceolatum|type=CDS|length=432bp|location=Sequence derived from alignment at Sc0000049:611115..613272- (Branchiostoma lanceolatum)
ATGACGCATACGTCTTTGCGTGTGATTGTCGATATGCTTTTTGTCACGCT
AACTCAGGGACACACGAGCAGTGACCAACTGACAGAGGAACAGATCGCTG
AGTTCAGGCAGGTTTTCTCGATGTTTGACCAGAACGGTGACGGCCACATC
ACCACTGCTGAGCTGGGAAGTGTGCTGCGAGCTCTGGGGCAGAACCCGAC
AGACGCCGAGCTGCGGGACATGATAAGAAAGGTTGACGTGGATGGAGATG
GAACCACCAACTTCTCGGAGTTCCTGCGCCTTGTGGGTCGGAAGAGCTCC
AGAGAGAAGACAGAGCAAGAGCTTCAGGATGCGTTTCATGCATTCGACAA
AGTAAGGCCGAGGAAAAGGAGTATTTCCGGTTACCCGACCGACCCTAGCA
AAAACCTGCCAACCCTAGTCTTATTTTGTTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00062337-exon-Sc0000049-1564993656:612528..613272BlTCONS00062337-exon-Sc0000049-1564993656:612528..613272Branchiostoma lanceolatumexon
BlTCONS00062337-exon-Sc0000049-1564993656:611115..611995BlTCONS00062337-exon-Sc0000049-1564993656:611115..611995Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00062337BlTCONS00062337-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000049genomeSc0000049:611115..613272 -
Properties
Property NameValue
GeneIDBlCUFF030681