BlTCONS00062328 (mRNA) - B. lanceolatum

Overview
NameBlTCONS00062328
Unique NameBlTCONS00062328
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

mRNA from alignment at Sc0000049:605750..607631-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>BlTCONS00062328 ID=BlTCONS00062328|Name=BlTCONS00062328|organism=Branchiostoma lanceolatum|type=mRNA|length=1882bp|location=Sequence derived from alignment at Sc0000049:605750..607631- (Branchiostoma lanceolatum)
TGATAATAGAAAGCTATATATACAACAGGTAATTCTGATCGGAACATTTA TAAACCAAATCAGCATTGTTAAACATGATATCATACATAACCATACCCCA TAAGATTGTCATTTAAAATCCTTAACTCCTTAAAAGAAGAAACGTGTAGT GCAGCTTCTAGGGTGCTAAGAAGAGTAGCTAGTTACCTATTAAGCTTCTT TTTTTTATCAAAAAGAAGTAAAAAAGAAGCTTATGAGCACATAACACCCA GATGGTATTCTAGAAACGTCCACAGTTACATTTATGTTAGAGCGCTTATA AATCTGCATTGTTTTCCGGTAGGATATGGTAAACGAGGTTGACACGGACG GAAACGGAACCATAGACTTCCCAGAATTCCTCACCATGATGGCTCATAAG ATGAAAGAGGAAGACAGCGAAACCGAACTGCGTGAAGCGTTTCTTGTGTT CGACAAGGTACGACTCGGTTGATTAATAGGATTAGTACAGACCAGCGTTG TCATCTAGATTTGTTATGACATACTACAGTTGCTTCGATATTGGCTGTCC GAACTGATTCACAAAATCATAACGTTACATATCAACTTTGCTAGATTTAC AATCTCCCTTTCTGTGCTGAAATATGTAGGGTCTCCTCGATACATATACA AAATAATTATACATATAACCCTTGCATGGTATACATAGGAAATATATTTT AAAATGTCTACACGTTAGAAATTCCTCAAATGATTGTAGAAGCTTATCAT CATCCCATACTACACACCCTTGTGTTAGGTAGATTAGCCTTATGGAACTT TAGTAACGTACCATGAATAGATGCCATACTTTGTACCTTGTGCAATTGTT GTGCAATTAAGTTATTATCATACAGGATGGTAACGGCTACATCAGCGCCG CGGAGCTGCGTCACGTGATGACCAACCTGGGAGAGAAGCTGACAGATGAA GAGGTGGATGAGATGATCCGAGAGGCTGACATCGACGGAGATGGTCAGGT TAGGGAAACTTAAAACTATTATTTCCACATTTTTTTTCTAGAAATATCAG GCTCAGGGTTAACGTGTTGCATTATTTTGACGTTCAGTTTTAACATTGTG AAAAGAGGCGATGCTTTAACATTGACAACACTCGATTTATCGATGTAGTT CTAACTGCGATTACTGCGATTATGTGTTGAGTAATATGGATTCCGAGCTT CACGTCTATTTAAAGCCTGTCGTATGGCCATAGGATGAATACACCAATCA TATTCAATTTTCCTATAGATCAACTACGAAGAGTTCACGCAGATGATGAC GACTAAGTAGCCGCCCACTACATCCATTTCAACAAGTTTCACCGCCATCT TGCTTCCCAGCATGCAACGCCAGCGTACATTGATGTACTAGTAGTTTGTA ACAACCTGACGCCCCCCTCCCCGCATTAGCCTATTTCCTAATGGTAGACC CGCCTGAATATCGATGTAAGTTTAGCAATTACCATAACAACATAAACTGA CCAGATACATTACACATTGTCACGGTAACGATATTATTTGTGTCCTGGGC TACCCAAAATGCCCCGCGTCTATACCATTATCTAATGGATGCGTGGAAAG GGGAAAGGTGCATACATTCTGTTCTTATTCTATGAACATATCACCTTTTG GAAAATGCATTAAAAGTGGCCAGTGTAATTTTCTTATGTCAAGAAGAAGC TGTTGACTTGCATCTATTGCCTTGCATCAATATAGAGTTGGACATATAAA TGATATATCACATCCACATAACATATGAAATAGATTACAAGGTAGAGGAC TTGACTGTTTTGATATCATTCTCTGCTCCTTTTCCAATACAATGACTGAT ATTGTTGAAGAATAAAACACACTTTAAAGTGA

Coding sequence (CDS) from alignment at Sc0000049:605750..607631-

>BlTCONS00062328 ID=BlTCONS00062328|Name=BlTCONS00062328|organism=Branchiostoma lanceolatum|type=CDS|length=327bp|location=Sequence derived from alignment at Sc0000049:605750..607631- (Branchiostoma lanceolatum)
GATAATAGAAAGCTATATATACAACAGGATATGGTAAACGAGGTTGACAC
GGACGGAAACGGAACCATAGACTTCCCAGAATTCCTCACCATGATGGCTC
ATAAGATGAAAGAGGAAGACAGCGAAACCGAACTGCGTGAAGCGTTTCTT
GTGTTCGACAAGGATGGTAACGGCTACATCAGCGCCGCGGAGCTGCGTCA
CGTGATGACCAACCTGGGAGAGAAGCTGACAGATGAAGAGGTGGATGAGA
TGATCCGAGAGGCTGACATCGACGGAGATGGTCAGATCAACTACGAAGAG
TTCACGCAGATGATGACGACTAAGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00062328BlTCONS00062328-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BlTCONS00062328-exon-Sc0000049-1564993656:607604..607631BlTCONS00062328-exon-Sc0000049-1564993656:607604..607631Branchiostoma lanceolatumexon
BlTCONS00062328-exon-Sc0000049-1564993656:607175..607309BlTCONS00062328-exon-Sc0000049-1564993656:607175..607309Branchiostoma lanceolatumexon
BlTCONS00062328-exon-Sc0000049-1564993656:606634..606756BlTCONS00062328-exon-Sc0000049-1564993656:606634..606756Branchiostoma lanceolatumexon
BlTCONS00062328-exon-Sc0000049-1564993656:605750..606363BlTCONS00062328-exon-Sc0000049-1564993656:605750..606363Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000049genomeSc0000049:605750..607631 -
Properties
Property NameValue
GeneIDBlCUFF030680